BLASTX nr result

ID: Coptis25_contig00014032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014032
         (1529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532853.1| conserved hypothetical protein [Ricinus comm...   171   6e-40
ref|XP_002532852.1| conserved hypothetical protein [Ricinus comm...    86   3e-14
emb|CAG07528.1| unnamed protein product [Tetraodon nigroviridis]       63   2e-07
ref|XP_003201248.1| PREDICTED: kelch-like protein 17 [Danio rerio]     63   2e-07
ref|XP_003963166.1| PREDICTED: kelch-like protein 17-like [Takif...    62   4e-07

>ref|XP_002532853.1| conserved hypothetical protein [Ricinus communis]
            gi|223527390|gb|EEF29531.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 203

 Score =  171 bits (432), Expect = 6e-40
 Identities = 96/202 (47%), Positives = 127/202 (62%), Gaps = 7/202 (3%)
 Frame = -2

Query: 1003 SERLNLATGEWEMLPPMQKRRSSAEGVAFRGMFYVVGGSD--DEPDSAEIYNPVSKEWKF 830
            SERLNL T EW+ LP MQ +R+ A G A R  FYVVGGS       SAEIY+P +  WKF
Sbjct: 2    SERLNLKTWEWQTLPDMQNQRAFATGAAHRNKFYVVGGSTIATLKHSAEIYDPKTNSWKF 61

Query: 829  EKLFLPAAESDGFAMGTFDHFMLLLTWSARLGIK--VWIQTSLPNLQKDRGWLLYAYHPD 656
               F+P  E+DG+A+ +F+  +L+LTWS RLG+K  +WI+ + PN   +R  L+  +   
Sbjct: 62   VNSFVP-KEADGYAVASFNGQLLILTWSDRLGMKLWLWIEMASPNSFGNRPRLISCFPCK 120

Query: 655  QEERYRLKQYGARLVRVGKELWIVTGDRGG-FHVHEACAWPTFPGPTFMPAEDRSVKLVS 479
            Q E   L+Q GA +VRVG+ELWIV G     F V   CAWP FP P F P+++  V+   
Sbjct: 121  QIEMMTLRQNGANMVRVGRELWIVVGKNDRIFQVDGRCAWPVFPAPFFRPSDEHKVQHKE 180

Query: 478  YVYA--FSIGIRRLAWRKIPIY 419
             +YA  FS G+ R+ WRKIP+Y
Sbjct: 181  EIYALSFSRGL-RVTWRKIPVY 201


>ref|XP_002532852.1| conserved hypothetical protein [Ricinus communis]
            gi|223527389|gb|EEF29530.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 143

 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
 Frame = -2

Query: 1489 MWYLSRHPNLNSDDQTKANSTLI---TCRNSIFCASDSGIFENISIIQVAEKSIDNTP-- 1325
            MW+LSR PN  S   T  N+  +   + RNSIF  SD+G+F+NI II++  K  D+    
Sbjct: 1    MWHLSRKPNTPSRTTTLPNNNNLQPFSPRNSIFPISDTGVFKNICIIRLVNKDDDDQHVH 60

Query: 1324 --------WNWFAYQATPNKFQAVVIPPNPSLKIQIISVLPNNGKFLCAVIVPSSPRPFA 1169
                    W++FAY ++P +F +V IP  PS +I++I++  N         +   P+   
Sbjct: 61   CNNNSCNLWDFFAYLSSPTQFHSVAIPRCPSFRIEVIAIFDNE--------LSDVPK--- 109

Query: 1168 NICMFPPHQKLCSAINYDVRNAMVAATAIIKNCLYLAGGYMGNP 1037
                          ++ + RN + AA A +   LYLAGGY GNP
Sbjct: 110  --------------MHCEDRNLVAAAAAFLDGFLYLAGGYKGNP 139


>emb|CAG07528.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 573

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
 Frame = -2

Query: 1171 ANICMFPPHQKLCSAINYDVRNAMVAATAIIKNCLYLAGGYMGNPSYVEPLAYLSSSERL 992
            A +  + P   + +AI   +     A  A++   LY+AGG  G        + L+S ER 
Sbjct: 447  ATVEKYDPQSNVWTAIANMLSRRSSAGVAVLDGMLYVAGGNDGT-------SCLNSVERF 499

Query: 991  NLATGEWEMLPPMQKRRSSAEGVAFRGMFYVVGGSDDEP--DSAEIYNPVSKEWKFEKLF 818
            N  T  WE + PM  RRS+ + VA  G  Y VGG+D     +S E YNP S +W      
Sbjct: 500  NPKTNTWEGVAPMNIRRSTHDLVAMDGWLYAVGGNDGSSSLNSIEKYNPRSNKWVAASCM 559

Query: 817  LPAAESDGFAM 785
                 S G A+
Sbjct: 560  FTRRSSVGVAV 570


>ref|XP_003201248.1| PREDICTED: kelch-like protein 17 [Danio rerio]
          Length = 591

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
 Frame = -2

Query: 1171 ANICMFPPHQKLCSAINYDVRNAMVAATAIIKNCLYLAGGYMGNPSYVEPLAYLSSSERL 992
            A +  + P     +AI   +     A  A+++  LY+AGG  G        + L+S ER 
Sbjct: 447  ATVEKYDPQSNAWTAIANMLSRRSSAGVAVLEGMLYVAGGNDGT-------SCLNSVERY 499

Query: 991  NLATGEWEMLPPMQKRRSSAEGVAFRGMFYVVGGSDDEP--DSAEIYNPVSKEWKFEKLF 818
            N  T  WE + PM  RRS+ + VA  G  Y VGG+D     +S E YNP S +W      
Sbjct: 500  NPKTNTWEGVAPMNIRRSTHDLVAMDGWLYAVGGNDGSSSLNSIEKYNPRSNKWVAASCM 559

Query: 817  LPAAESDGFAM 785
                 S G A+
Sbjct: 560  FTRRSSVGVAV 570


>ref|XP_003963166.1| PREDICTED: kelch-like protein 17-like [Takifugu rubripes]
          Length = 591

 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
 Frame = -2

Query: 1171 ANICMFPPHQKLCSAINYDVRNAMVAATAIIKNCLYLAGGYMGNPSYVEPLAYLSSSERL 992
            A +  + P     +AI   +     A  A+++  LY+AGG  G        + L+S ER 
Sbjct: 447  ATVEKYDPLNNAWTAIANMLSRRSSAGVAVLEGMLYVAGGNDGT-------SCLNSVERF 499

Query: 991  NLATGEWEMLPPMQKRRSSAEGVAFRGMFYVVGGSDDEP--DSAEIYNPVSKEWKFEKLF 818
            N  T  WE + PM  RRS+ + VA  G  Y VGG+D     +S E YNP S +W      
Sbjct: 500  NPKTNTWEGVAPMNIRRSTHDLVAMDGWLYAVGGNDGSSSLNSIEKYNPRSNKWVAASCM 559

Query: 817  LPAAESDGFAM 785
                 S G A+
Sbjct: 560  FTRRSSVGVAI 570


Top