BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014015
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]   309   6e-82
ref|XP_002325124.1| f-box family protein [Populus trichocarpa] g...   285   7e-75
ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula] gi...   285   9e-75
gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK...   283   3e-74
ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform ...   279   6e-73

>ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]
          Length = 308

 Score =  309 bits (791), Expect = 6e-82
 Identities = 145/191 (75%), Positives = 168/191 (87%)
 Frame = -1

Query: 835 RCSNLQVLSIKSCPNVRDSSIAKVASACLMLLELDISYCYEISHESLELIGRKCLNLKIL 656
           RCSNL+VLSIKSCPNV D+S+A+VA  CL L E+DISYCYEISHESL L+GR C NLKIL
Sbjct: 118 RCSNLEVLSIKSCPNVTDASMARVAFRCLKLREVDISYCYEISHESLILLGRNCPNLKIL 177

Query: 655 RRNLMNWLDPSQHLGIVPKEYLDACPQNGNEEAAAIGKFMPHLKHLELRFSKLSVHGLVL 476
           +RNLMNWLDPSQH+GIVP EYL+ACPQ+G+ EAAAIGK MPHL+HLELRFSK+S  GL L
Sbjct: 178 KRNLMNWLDPSQHIGIVPNEYLNACPQDGDSEAAAIGKTMPHLEHLELRFSKISAKGLAL 237

Query: 475 ITEGCPCLEYLDLFGCANLTSRDMETASTNLKNLERLVKPNFYIPRSVFHTERYGHWRLY 296
           I +GC  LEYLDL GCANLTSRD+  A++NLKNL+++ KPNFYIPRSVFH ERYGHWRLY
Sbjct: 238 ICDGCLNLEYLDLSGCANLTSRDIANATSNLKNLKKIEKPNFYIPRSVFHAERYGHWRLY 297

Query: 295 DERFQTNVFQI 263
           D+RFQT+ F+I
Sbjct: 298 DDRFQTDTFRI 308


>ref|XP_002325124.1| f-box family protein [Populus trichocarpa]
           gi|222866558|gb|EEF03689.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score =  285 bits (730), Expect = 7e-75
 Identities = 135/191 (70%), Positives = 160/191 (83%)
 Frame = -1

Query: 835 RCSNLQVLSIKSCPNVRDSSIAKVASACLMLLELDISYCYEISHESLELIGRKCLNLKIL 656
           RCSNLQVLSIKSC NV D+S+A++A  C  L ELDISYC+EISHESL ++GR C NL++L
Sbjct: 124 RCSNLQVLSIKSCRNVTDASMAQIAYKCAKLKELDISYCFEISHESLVMMGRNCPNLRVL 183

Query: 655 RRNLMNWLDPSQHLGIVPKEYLDACPQNGNEEAAAIGKFMPHLKHLELRFSKLSVHGLVL 476
           +RN MNWLD S+H+GIVP  YL+ CPQ+G+ EA AIGK+MP+L HLELRFSK+S  GLV 
Sbjct: 184 KRNQMNWLDASEHVGIVPDSYLNTCPQDGDCEAGAIGKYMPNLVHLELRFSKMSAKGLVS 243

Query: 475 ITEGCPCLEYLDLFGCANLTSRDMETASTNLKNLERLVKPNFYIPRSVFHTERYGHWRLY 296
           I EGC  LEYLDL GCANLTSRD+  A+  LKNL+ + KPNFYIPRSVFHTERYGHWRLY
Sbjct: 244 ICEGCLNLEYLDLSGCANLTSRDIVKATLGLKNLKEIKKPNFYIPRSVFHTERYGHWRLY 303

Query: 295 DERFQTNVFQI 263
           DERFQT++F+I
Sbjct: 304 DERFQTDIFRI 314


>ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula]
           gi|355511349|gb|AES92491.1| F-box protein SKIP1
           [Medicago truncatula]
          Length = 302

 Score =  285 bits (729), Expect = 9e-75
 Identities = 133/191 (69%), Positives = 161/191 (84%)
 Frame = -1

Query: 835 RCSNLQVLSIKSCPNVRDSSIAKVASACLMLLELDISYCYEISHESLELIGRKCLNLKIL 656
           RC NL+VLSI+SCP V D S++K+A+ C  L ELDISYCYEI+HESL LIGR C N+K+L
Sbjct: 112 RCPNLEVLSIRSCPRVTDDSMSKIATGCPNLRELDISYCYEITHESLVLIGRNCSNIKVL 171

Query: 655 RRNLMNWLDPSQHLGIVPKEYLDACPQNGNEEAAAIGKFMPHLKHLELRFSKLSVHGLVL 476
           +RNLMNWLDPSQH+GIVP +YL+ACPQ+G+ EAAAI   MPHL+ LE+RFSKL+  GL  
Sbjct: 172 KRNLMNWLDPSQHVGIVPDDYLNACPQDGDSEAAAIANSMPHLEGLEIRFSKLTAKGLNS 231

Query: 475 ITEGCPCLEYLDLFGCANLTSRDMETASTNLKNLERLVKPNFYIPRSVFHTERYGHWRLY 296
           I +GCP LE+LDL GCANLTSRD+  AS++L +L+ + KPNFYIPRSVFHTERYGHW LY
Sbjct: 232 ICQGCPNLEFLDLSGCANLTSRDIAKASSSLSHLKDIKKPNFYIPRSVFHTERYGHWSLY 291

Query: 295 DERFQTNVFQI 263
           DERFQT+VF+I
Sbjct: 292 DERFQTDVFRI 302


>gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK45992.1| unknown
           [Medicago truncatula]
          Length = 302

 Score =  283 bits (725), Expect = 3e-74
 Identities = 132/191 (69%), Positives = 160/191 (83%)
 Frame = -1

Query: 835 RCSNLQVLSIKSCPNVRDSSIAKVASACLMLLELDISYCYEISHESLELIGRKCLNLKIL 656
           RC NL+VLSI+SCP V D S++K+A+ C  L ELDISYCYEI+HESL LIGR C N+K+L
Sbjct: 112 RCPNLEVLSIRSCPRVTDDSMSKIATGCPNLRELDISYCYEITHESLVLIGRNCSNIKVL 171

Query: 655 RRNLMNWLDPSQHLGIVPKEYLDACPQNGNEEAAAIGKFMPHLKHLELRFSKLSVHGLVL 476
           +RNLMNWLDPSQH+GIVP +YL+ACPQ+G+ EA AI   MPHL+ LE+RFSKL+  GL  
Sbjct: 172 KRNLMNWLDPSQHVGIVPDDYLNACPQDGDSEAVAIANSMPHLEGLEIRFSKLTAKGLNS 231

Query: 475 ITEGCPCLEYLDLFGCANLTSRDMETASTNLKNLERLVKPNFYIPRSVFHTERYGHWRLY 296
           I +GCP LE+LDL GCANLTSRD+  AS++L +L+ + KPNFYIPRSVFHTERYGHW LY
Sbjct: 232 ICQGCPNLEFLDLSGCANLTSRDIAKASSSLSHLKDIKKPNFYIPRSVFHTERYGHWSLY 291

Query: 295 DERFQTNVFQI 263
           DERFQT+VF+I
Sbjct: 292 DERFQTDVFRI 302


>ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform 1 [Glycine max]
          Length = 306

 Score =  279 bits (713), Expect = 6e-73
 Identities = 131/190 (68%), Positives = 158/190 (83%)
 Frame = -1

Query: 832 CSNLQVLSIKSCPNVRDSSIAKVASACLMLLELDISYCYEISHESLELIGRKCLNLKILR 653
           C NL+VL I+SCP V D SI+++A +C  L ELDISYCYEI+HESL LIGR C NLK+L+
Sbjct: 117 CPNLEVLFIRSCPRVTDDSISRIALSCPKLRELDISYCYEITHESLVLIGRNCPNLKVLK 176

Query: 652 RNLMNWLDPSQHLGIVPKEYLDACPQNGNEEAAAIGKFMPHLKHLELRFSKLSVHGLVLI 473
           RNLMNWLDPSQH GIVP +YL+ACPQ+G++EAAAI   MP L+ LE+RFSKL+  GL  I
Sbjct: 177 RNLMNWLDPSQHRGIVPDDYLNACPQDGDDEAAAIANSMPGLEQLEIRFSKLTAKGLNSI 236

Query: 472 TEGCPCLEYLDLFGCANLTSRDMETASTNLKNLERLVKPNFYIPRSVFHTERYGHWRLYD 293
            +GCP LE+LDL GCANLTSRD+  AS++L +L+ + KPNFYIPRSVFHTERYGHW LYD
Sbjct: 237 CQGCPNLEFLDLSGCANLTSRDIANASSSLVHLKEIKKPNFYIPRSVFHTERYGHWSLYD 296

Query: 292 ERFQTNVFQI 263
           ERFQT++FQI
Sbjct: 297 ERFQTDIFQI 306