BLASTX nr result

ID: Coptis25_contig00014012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014012
         (1709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635012.1| PREDICTED: uncharacterized protein LOC100852...   172   3e-40
ref|XP_003635011.1| PREDICTED: uncharacterized protein LOC100852...   172   3e-40
emb|CAN64493.1| hypothetical protein VITISV_001939 [Vitis vinifera]   164   7e-38
ref|XP_004139627.1| PREDICTED: uncharacterized protein LOC101222...   127   9e-27
ref|XP_002301791.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-24

>ref|XP_003635012.1| PREDICTED: uncharacterized protein LOC100852917 isoform 2 [Vitis
            vinifera] gi|359495533|ref|XP_003635013.1| PREDICTED:
            uncharacterized protein LOC100852917 isoform 3 [Vitis
            vinifera]
          Length = 335

 Score =  172 bits (435), Expect = 3e-40
 Identities = 145/374 (38%), Positives = 173/374 (46%), Gaps = 5/374 (1%)
 Frame = +3

Query: 333  MSVLESTHLRDLLRVRDNNNEDDGRDSLAGLTLAAVLGCETSSSTSNHIRRESSSRTLLE 512
            MSV++ + LRD LR R+   +DDGRD+ AGLTL AVLGCE       HI     +RTLL+
Sbjct: 7    MSVMDPSTLRDRLRTRE---DDDGRDAWAGLTLGAVLGCE-KRPPPGHI-----NRTLLD 57

Query: 513  IIKDEESGAAYRGLIVPPLQXXXXXXXXXXXXXXXXXSWKYFKSRLRLRRAGAAFSSSTS 692
            II+DE +G  Y+ ++  P                   SWK FK RLR+RRAGAA++ S+ 
Sbjct: 58   IIRDESTG--YKDVLGQP------------NNNNNKMSWKSFKDRLRIRRAGAAWT-SSM 102

Query: 693  SHPVSACDFSIQDCNIRISPPVLVEHRPRILRIPTFANGRSTNSSENSPWNEGGGIESVS 872
              P S      Q    + +   +    P     PT     S  + EN    E   + ++ 
Sbjct: 103  PIPASDVPTRSQLSRRQSTRVTMYTTDPPE---PTETFEESPGTPENPLPVEAVQVHNLR 159

Query: 873  R--STGNSISLAESLXXXXXXXXXXXXXVGSNLIENVVESRLLREEMELNLTESPVE--- 1037
               S  NSI  A S              V    + +   S  L EE EL   ES      
Sbjct: 160  PQFSRNNSIR-APSRTFSRADSTRLHTGVTDGPVVSRRLSAALAEERELQRAESAAALGG 218

Query: 1038 ETPPAREEMRVSLXXXXXXXXXXXXXXXXXXXXXXXXSLMALLEETDWSTGGIVGTTXXX 1217
            +   A EE                             SLMALLEETD    GIVG     
Sbjct: 219  DDDEAGEE------------EDEGEGEEEGPEAAPRMSLMALLEETD-RQAGIVGPAYVL 265

Query: 1218 XXXXXXXXXXXXXXXXXXXXRGEYVCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNRGNC 1397
                                  EY CCVCMVRHKGAAFIPCGHTFCRLCSRELWV+RGNC
Sbjct: 266  EEEEDEDEEEEAGSGGGI----EYNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNC 321

Query: 1398 PLCNGFILEILDIF 1439
            PLCNGFILEILDIF
Sbjct: 322  PLCNGFILEILDIF 335


>ref|XP_003635011.1| PREDICTED: uncharacterized protein LOC100852917 isoform 1 [Vitis
            vinifera]
          Length = 329

 Score =  172 bits (435), Expect = 3e-40
 Identities = 145/374 (38%), Positives = 173/374 (46%), Gaps = 5/374 (1%)
 Frame = +3

Query: 333  MSVLESTHLRDLLRVRDNNNEDDGRDSLAGLTLAAVLGCETSSSTSNHIRRESSSRTLLE 512
            MSV++ + LRD LR R+   +DDGRD+ AGLTL AVLGCE       HI     +RTLL+
Sbjct: 1    MSVMDPSTLRDRLRTRE---DDDGRDAWAGLTLGAVLGCE-KRPPPGHI-----NRTLLD 51

Query: 513  IIKDEESGAAYRGLIVPPLQXXXXXXXXXXXXXXXXXSWKYFKSRLRLRRAGAAFSSSTS 692
            II+DE +G  Y+ ++  P                   SWK FK RLR+RRAGAA++ S+ 
Sbjct: 52   IIRDESTG--YKDVLGQP------------NNNNNKMSWKSFKDRLRIRRAGAAWT-SSM 96

Query: 693  SHPVSACDFSIQDCNIRISPPVLVEHRPRILRIPTFANGRSTNSSENSPWNEGGGIESVS 872
              P S      Q    + +   +    P     PT     S  + EN    E   + ++ 
Sbjct: 97   PIPASDVPTRSQLSRRQSTRVTMYTTDPPE---PTETFEESPGTPENPLPVEAVQVHNLR 153

Query: 873  R--STGNSISLAESLXXXXXXXXXXXXXVGSNLIENVVESRLLREEMELNLTESPVE--- 1037
               S  NSI  A S              V    + +   S  L EE EL   ES      
Sbjct: 154  PQFSRNNSIR-APSRTFSRADSTRLHTGVTDGPVVSRRLSAALAEERELQRAESAAALGG 212

Query: 1038 ETPPAREEMRVSLXXXXXXXXXXXXXXXXXXXXXXXXSLMALLEETDWSTGGIVGTTXXX 1217
            +   A EE                             SLMALLEETD    GIVG     
Sbjct: 213  DDDEAGEE------------EDEGEGEEEGPEAAPRMSLMALLEETD-RQAGIVGPAYVL 259

Query: 1218 XXXXXXXXXXXXXXXXXXXXRGEYVCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNRGNC 1397
                                  EY CCVCMVRHKGAAFIPCGHTFCRLCSRELWV+RGNC
Sbjct: 260  EEEEDEDEEEEAGSGGGI----EYNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNC 315

Query: 1398 PLCNGFILEILDIF 1439
            PLCNGFILEILDIF
Sbjct: 316  PLCNGFILEILDIF 329


>emb|CAN64493.1| hypothetical protein VITISV_001939 [Vitis vinifera]
          Length = 326

 Score =  164 bits (415), Expect = 7e-38
 Identities = 141/371 (38%), Positives = 169/371 (45%), Gaps = 5/371 (1%)
 Frame = +3

Query: 342  LESTHLRDLLRVRDNNNEDDGRDSLAGLTLAAVLGCETSSSTSNHIRRESSSRTLLEIIK 521
            ++ + LRD LR R+   + DGRD+ AGLTL AVLGCE       HI     +RTLL+II+
Sbjct: 1    MDPSTLRDRLRTRE---DXDGRDAWAGLTLGAVLGCE-KRPPPGHI-----NRTLLDIIR 51

Query: 522  DEESGAAYRGLIVPPLQXXXXXXXXXXXXXXXXXSWKYFKSRLRLRRAGAAFSSSTSSHP 701
            DE +G  Y+ ++  P                   SWK FK RLR+RRAGAA++ S+   P
Sbjct: 52   DESTG--YKDVLGQP------------NNNNNKMSWKSFKDRLRIRRAGAAWT-SSMPIP 96

Query: 702  VSACDFSIQDCNIRISPPVLVEHRPRILRIPTFANGRSTNSSENSPWNEGGGIESVSR-- 875
             S      Q    + +   +    P     PT     S  + EN    E   + ++    
Sbjct: 97   ASDVPTRSQLSRRQSTRVTMYTTDPPE---PTETFEESPGTPENPLPVEAVQVHNLRPQF 153

Query: 876  STGNSISLAESLXXXXXXXXXXXXXVGSNLIENVVESRLLREEMELNLTESPVE---ETP 1046
            S  NSI  A S              V    + +   S  L EE EL   ES      +  
Sbjct: 154  SRNNSIR-APSRTFSRADSTRLHTGVTDGPVVSRRLSAALAEERELQRAESAAALGGDDD 212

Query: 1047 PAREEMRVSLXXXXXXXXXXXXXXXXXXXXXXXXSLMALLEETDWSTGGIVGTTXXXXXX 1226
             A EE                             SLMALLEETD    GIVG        
Sbjct: 213  EAGEE------------EDEGEGEEEGPEAAPRMSLMALLEETD-RQAGIVGPAYVLEEE 259

Query: 1227 XXXXXXXXXXXXXXXXXRGEYVCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNRGNCPLC 1406
                               EY CCVCMVRHKGAAFIPCGHTFCRLCSRELWV+RGNCPLC
Sbjct: 260  EDEDEEEEGDSGGGI----EYNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLC 315

Query: 1407 NGFILEILDIF 1439
            NGFILEILDIF
Sbjct: 316  NGFILEILDIF 326


>ref|XP_004139627.1| PREDICTED: uncharacterized protein LOC101222466 [Cucumis sativus]
            gi|449475393|ref|XP_004154438.1| PREDICTED:
            uncharacterized LOC101222466 [Cucumis sativus]
          Length = 342

 Score =  127 bits (319), Expect = 9e-27
 Identities = 118/376 (31%), Positives = 151/376 (40%), Gaps = 29/376 (7%)
 Frame = +3

Query: 399  DGRDSLAGLTLAAVLGCETSSSTSNHIRRESSSRTLLEIIKDEESGAAYRGLIVPPLQXX 578
            DGRD   G TL  VL  +  +  S+        RTLL+II+D+   +             
Sbjct: 6    DGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRDDVGKSPVSN--------- 56

Query: 579  XXXXXXXXXXXXXXXSWKYFKSRLRLR-------RAGAAFSSSTSSHPVSACDFSIQDCN 737
                           SWK+F+ RLRL             F   TS+  +S  + S +   
Sbjct: 57   -----------RERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTT 105

Query: 738  ---IRISPPVLVEHRPRILRI-PTFANGRSTNSSENSPWNE------GGGIESVSR---- 875
               +  +P +    R    R+ P+        +S  SP N       G G  S+ R    
Sbjct: 106  TAAVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPDNNSAAAASGSGGRSLLRPQMS 165

Query: 876  ---STGNSISLAESLXXXXXXXXXXXXXVGSNLIEN-VVESRLLREEMELNLTESPVEET 1043
               ST  S+  +ES              + + L E   + +R      E    E+ V+E 
Sbjct: 166  RHNSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATVDEE 225

Query: 1044 PPAREEMRVSLXXXXXXXXXXXXXXXXXXXXXXXXSLMALLEETDWSTGGIVGTTXXXXX 1223
               +E++  S                         SLM LLEETD   G   G+T     
Sbjct: 226  EQQQEQVAESTPAPVRM------------------SLMDLLEETDRQMG-FEGSTYRIED 266

Query: 1224 XXXXXXXXXXXXXXXXXXRG----EYVCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNRG 1391
                               G    E  CCVCMVRHKGAAFIPCGHTFCRLCSRELWV+RG
Sbjct: 267  EDEEEEIENEVSTTVCGGGGSGGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRG 326

Query: 1392 NCPLCNGFILEILDIF 1439
            NCPLCNGFILEILDIF
Sbjct: 327  NCPLCNGFILEILDIF 342


>ref|XP_002301791.1| predicted protein [Populus trichocarpa] gi|222843517|gb|EEE81064.1|
            predicted protein [Populus trichocarpa]
          Length = 396

 Score =  118 bits (296), Expect = 4e-24
 Identities = 50/52 (96%), Positives = 50/52 (96%)
 Frame = +3

Query: 1284 EYVCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNRGNCPLCNGFILEILDIF 1439
            EY CCVCMVRHKGAAFIPCGHTFCRLCSRELWV RGNCPLCNGFILEILDIF
Sbjct: 345  EYTCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 396


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