BLASTX nr result

ID: Coptis25_contig00014005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014005
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882364.1| tRNA synthetase class I family protein [Arab...   186   1e-45
ref|NP_974219.1| tryptophanyl-tRNA synthetase [Arabidopsis thali...   183   1e-44
ref|NP_187110.1| tryptophanyl-tRNA synthetase [Arabidopsis thali...   183   1e-44
ref|XP_002312840.1| predicted protein [Populus trichocarpa] gi|1...   182   2e-44
ref|XP_002275626.1| PREDICTED: tryptophanyl-tRNA synthetase, cyt...   182   2e-44

>ref|XP_002882364.1| tRNA synthetase class I family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297328204|gb|EFH58623.1| tRNA synthetase
           class I family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 402

 Score =  186 bits (473), Expect = 1e-45
 Identities = 86/102 (84%), Positives = 95/102 (93%)
 Frame = +2

Query: 68  PWEVAAKGDGKIDYDKLITKFGCQKLDHSLIDRVQRLTGQLPHVFLRRGVFFAHREFDQI 247
           PWEV+AK  GKIDYDKLI KFGCQ+LD SLIDRVQRLT + PHVFLRRGVFFAHR+F++I
Sbjct: 20  PWEVSAKDGGKIDYDKLIDKFGCQRLDESLIDRVQRLTSRQPHVFLRRGVFFAHRDFNEI 79

Query: 248 LSAYEKGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQDAFK 373
           L AYEKGDKFYLYTGRGPSSE+LHLGHLIPF+FTKYLQ+AFK
Sbjct: 80  LDAYEKGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAFK 121


>ref|NP_974219.1| tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
           gi|332640583|gb|AEE74104.1| tryptophanyl-tRNA synthetase
           [Arabidopsis thaliana]
          Length = 402

 Score =  183 bits (464), Expect = 1e-44
 Identities = 84/102 (82%), Positives = 94/102 (92%)
 Frame = +2

Query: 68  PWEVAAKGDGKIDYDKLITKFGCQKLDHSLIDRVQRLTGQLPHVFLRRGVFFAHREFDQI 247
           PWEV+AK  GKIDYDKLI KFGCQ+LD SLIDRVQRLT + PHVFLRR VFFAHR+F++I
Sbjct: 20  PWEVSAKDGGKIDYDKLIDKFGCQRLDESLIDRVQRLTSRQPHVFLRRSVFFAHRDFNEI 79

Query: 248 LSAYEKGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQDAFK 373
           L AYE+GDKFYLYTGRGPSSE+LHLGHLIPF+FTKYLQ+AFK
Sbjct: 80  LDAYERGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAFK 121


>ref|NP_187110.1| tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
           gi|145331754|ref|NP_001078104.1| tryptophanyl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|6175164|gb|AAF04890.1|AC011437_5 putative
           tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
           gi|19310593|gb|AAL85027.1| putative tryptophanyl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|21436361|gb|AAM51350.1| putative tryptophanyl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|110740619|dbj|BAE98413.1| putative tryptophanyl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|332640582|gb|AEE74103.1| tryptophanyl-tRNA synthetase
           [Arabidopsis thaliana] gi|332640584|gb|AEE74105.1|
           tryptophanyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 402

 Score =  183 bits (464), Expect = 1e-44
 Identities = 84/102 (82%), Positives = 94/102 (92%)
 Frame = +2

Query: 68  PWEVAAKGDGKIDYDKLITKFGCQKLDHSLIDRVQRLTGQLPHVFLRRGVFFAHREFDQI 247
           PWEV+AK  GKIDYDKLI KFGCQ+LD SLIDRVQRLT + PHVFLRR VFFAHR+F++I
Sbjct: 20  PWEVSAKDGGKIDYDKLIDKFGCQRLDESLIDRVQRLTSRQPHVFLRRSVFFAHRDFNEI 79

Query: 248 LSAYEKGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQDAFK 373
           L AYE+GDKFYLYTGRGPSSE+LHLGHLIPF+FTKYLQ+AFK
Sbjct: 80  LDAYERGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAFK 121


>ref|XP_002312840.1| predicted protein [Populus trichocarpa] gi|118482985|gb|ABK93404.1|
           unknown [Populus trichocarpa]
           gi|222849248|gb|EEE86795.1| predicted protein [Populus
           trichocarpa]
          Length = 404

 Score =  182 bits (462), Expect = 2e-44
 Identities = 83/102 (81%), Positives = 93/102 (91%)
 Frame = +2

Query: 68  PWEVAAKGDGKIDYDKLITKFGCQKLDHSLIDRVQRLTGQLPHVFLRRGVFFAHREFDQI 247
           PWEVAAK  GKIDYDKLI KFGCQ+LD +LIDRV RLTG+ PHVFLRRGVFFAHR+F++I
Sbjct: 22  PWEVAAKDGGKIDYDKLIDKFGCQRLDQTLIDRVHRLTGRPPHVFLRRGVFFAHRDFNEI 81

Query: 248 LSAYEKGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQDAFK 373
           L AYEKG KFYLYTGRGPSSE+LHLGHL+PF+FTKYLQD F+
Sbjct: 82  LDAYEKGKKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDVFR 123


>ref|XP_002275626.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic [Vitis
           vinifera] gi|302143316|emb|CBI21877.3| unnamed protein
           product [Vitis vinifera]
          Length = 399

 Score =  182 bits (462), Expect = 2e-44
 Identities = 82/102 (80%), Positives = 94/102 (92%)
 Frame = +2

Query: 68  PWEVAAKGDGKIDYDKLITKFGCQKLDHSLIDRVQRLTGQLPHVFLRRGVFFAHREFDQI 247
           PWEV+AK  GKIDYDKLI KFGCQ+LD +LIDRVQRLT + PHVFLRRGVFFAHR+ +++
Sbjct: 17  PWEVSAKDGGKIDYDKLIDKFGCQRLDQTLIDRVQRLTSRPPHVFLRRGVFFAHRDLNEV 76

Query: 248 LSAYEKGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQDAFK 373
           L AYE+GDKFYLYTGRGPSSE+LHLGHL+PF+FTKYLQDAFK
Sbjct: 77  LDAYERGDKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFK 118


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