BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014002
         (1083 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40866.1| bHLH transcriptional factor [Coptis japonica]         405   e-111
ref|XP_002268590.2| PREDICTED: transcription factor bHLH104-like...   231   2e-58
ref|XP_002529295.1| DNA binding protein, putative [Ricinus commu...   221   3e-55
emb|CBI23608.3| unnamed protein product [Vitis vinifera]              216   6e-54
ref|XP_002280987.2| PREDICTED: transcription factor bHLH104-like...   212   1e-52

>dbj|BAJ40866.1| bHLH transcriptional factor [Coptis japonica]
          Length = 219

 Score =  405 bits (1041), Expect = e-111
 Identities = 200/219 (91%), Positives = 200/219 (91%)
 Frame = +2

Query: 146 MNSFPEDSPWNLIDYTRLYEDPSSNDLLWCSNQSACTELDVSAAGAGPVEKGCAKKRGRN 325
           MNSFPEDSPWNLIDYTRLYEDPSSNDLLWCSNQSACTELDVSAAGAGPVEKGCAKKRGRN
Sbjct: 1   MNSFPEDSPWNLIDYTRLYEDPSSNDLLWCSNQSACTELDVSAAGAGPVEKGCAKKRGRN 60

Query: 326 ESCGGLGSKACREKMRRDKLNDRFADLSSALEPGRPAKTDKSAILSDAIRVLNQLRTESQ 505
           ESCGGLGSKACREKMRRDKLNDRFADLSSALEPGRPAKTDKSAILSDAIRVLNQLRTESQ
Sbjct: 61  ESCGGLGSKACREKMRRDKLNDRFADLSSALEPGRPAKTDKSAILSDAIRVLNQLRTESQ 120

Query: 506 ELKEANEKLQEDIXXXXXXXXXXXXXXXXXXXDKERIEQQMKAMAIVPGGIVPPHPATYQ 685
           ELKEANEKLQEDI                   DKERIEQQMKAMAIVPGGIVPPHPATYQ
Sbjct: 121 ELKEANEKLQEDIKNLKAEKNELREEKNLLKADKERIEQQMKAMAIVPGGIVPPHPATYQ 180

Query: 686 AGVNKFMAFPSYGGYPMWQYIPPASLDTSQDHVLRPPVA 802
           AGVNKFMAFPSYGGYPMWQYIPPASLDTSQDHVLRPPVA
Sbjct: 181 AGVNKFMAFPSYGGYPMWQYIPPASLDTSQDHVLRPPVA 219


>ref|XP_002268590.2| PREDICTED: transcription factor bHLH104-like [Vitis vinifera]
          Length = 216

 Score =  231 bits (589), Expect = 2e-58
 Identities = 120/219 (54%), Positives = 146/219 (66%)
 Frame = +2

Query: 146 MNSFPEDSPWNLIDYTRLYEDPSSNDLLWCSNQSACTELDVSAAGAGPVEKGCAKKRGRN 325
           M+SF ED  W+L+DY  + ED +S D  W +NQS   E++         EK C + R + 
Sbjct: 1   MDSF-EDGGWDLLDYC-IIEDATSADYFW-ANQSPSREINALVVDTVSTEKRCKRGREKG 57

Query: 326 ESCGGLGSKACREKMRRDKLNDRFADLSSALEPGRPAKTDKSAILSDAIRVLNQLRTESQ 505
           E C    SKACREKMRR+K+NDRF DLSS LEPGRP KTDKS+ILSDAI VLNQLRTE++
Sbjct: 58  ERCSRAESKACREKMRREKMNDRFLDLSSLLEPGRPPKTDKSSILSDAIHVLNQLRTEAR 117

Query: 506 ELKEANEKLQEDIXXXXXXXXXXXXXXXXXXXDKERIEQQMKAMAIVPGGIVPPHPATYQ 685
           ELK   +KL+EDI                   DKE+++Q++KAM +VP G VP HP  YQ
Sbjct: 118 ELKGKTQKLREDIRTLKAEKSELREEKLILKADKEKMQQRVKAMNVVPPGYVPAHPLAYQ 177

Query: 686 AGVNKFMAFPSYGGYPMWQYIPPASLDTSQDHVLRPPVA 802
           AG NK + FP YGG+ MWQ+IP   LDTSQDHVLRPPVA
Sbjct: 178 AGANKMVGFPGYGGFQMWQWIPQTVLDTSQDHVLRPPVA 216


>ref|XP_002529295.1| DNA binding protein, putative [Ricinus communis]
           gi|223531219|gb|EEF33064.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 219

 Score =  221 bits (562), Expect = 3e-55
 Identities = 113/220 (51%), Positives = 149/220 (67%), Gaps = 1/220 (0%)
 Frame = +2

Query: 146 MNSFPEDSPWNLIDYTRLYEDPSSNDLLWCSNQSACTELDVSAAG-AGPVEKGCAKKRGR 322
           M+S  E S W+ +DY+ + E  +S+DLLW ++ +  +E+D S++G A   EK C++KR R
Sbjct: 1   MDSLEEGSCWDFLDYSFIEETTTSSDLLWPNSNNNLSEIDFSSSGGAVSEEKQCSRKRAR 60

Query: 323 NESCGGLGSKACREKMRRDKLNDRFADLSSALEPGRPAKTDKSAILSDAIRVLNQLRTES 502
            +SC    +KACREK+RR++LNDRF DLSS LEP RPA+TDK ++L DAIRVLNQL+TE+
Sbjct: 61  GDSCSKPVTKACREKLRRERLNDRFQDLSSVLEPERPARTDKPSLLDDAIRVLNQLKTEA 120

Query: 503 QELKEANEKLQEDIXXXXXXXXXXXXXXXXXXXDKERIEQQMKAMAIVPGGIVPPHPATY 682
           QELKE NEKL E+I                   DKER EQQ+K MA+ P G +P HPA Y
Sbjct: 121 QELKETNEKLLEEIKCLKAEKNELREEKLTLKADKERTEQQLKIMAVRPPGYMPAHPAAY 180

Query: 683 QAGVNKFMAFPSYGGYPMWQYIPPASLDTSQDHVLRPPVA 802
            A +NK   +PS+G  PMWQ +PPA+ DTS+DH   PP A
Sbjct: 181 HAAMNKMAIYPSFGLIPMWQ-LPPAAQDTSKDHEYWPPAA 219


>emb|CBI23608.3| unnamed protein product [Vitis vinifera]
          Length = 248

 Score =  216 bits (551), Expect = 6e-54
 Identities = 117/222 (52%), Positives = 150/222 (67%), Gaps = 1/222 (0%)
 Frame = +2

Query: 140 KEMNSFPEDSPWNLIDYTRLYEDPSSNDLLWCSNQSACTELDVSAAGAGPVEKGCAKKRG 319
           K M+SF +D+ W+ +++ +L +D +SNDL W  N  A  ++D+S   A   E    +KRG
Sbjct: 30  KSMDSFDDDT-WDFLNH-KLIDDVTSNDLSWI-NDGAGVDIDLSRICAASQENEGRQKRG 86

Query: 320 RNESCGGLGSKACREKMRRDKLNDRFADLSSALEPGRPAKTDKSAILSDAIRVLNQLRTE 499
           RN+S    G+KACREK+RR++LNDRF DLSS LEPG+ AKTDK AIL DAIRVLNQLR E
Sbjct: 87  RNDSSTRPGTKACREKLRRERLNDRFLDLSSILEPGKSAKTDKLAILGDAIRVLNQLRNE 146

Query: 500 SQELKEANEKLQEDIXXXXXXXXXXXXXXXXXXXDKERIEQQMKAMAIVPGGIVPPHP-A 676
           +++L++ANEKLQE+I                   DKERIEQQMKA++    G  P +P A
Sbjct: 147 AKDLEDANEKLQEEIRSLKAEKNELREEKLLLKADKERIEQQMKAISAPAAGFWPTYPAA 206

Query: 677 TYQAGVNKFMAFPSYGGYPMWQYIPPASLDTSQDHVLRPPVA 802
           T+  G NK   FPSYG +PMWQYIP ++LDTS DH LRPP A
Sbjct: 207 THHTGANKSAVFPSYGLFPMWQYIPSSALDTSHDHELRPPAA 248


>ref|XP_002280987.2| PREDICTED: transcription factor bHLH104-like [Vitis vinifera]
          Length = 219

 Score =  212 bits (539), Expect = 1e-52
 Identities = 115/221 (52%), Positives = 150/221 (67%), Gaps = 2/221 (0%)
 Frame = +2

Query: 146 MNSFPEDSPWNLIDYTRLYEDPSSNDLLWCSN-QSACTELDVSAAGAGPVEKGCAKKRGR 322
           M+SF +D+ W+ +++ +L +D +SNDL W ++   A  ++D+S   A   E    +KRGR
Sbjct: 1   MDSFDDDT-WDFLNH-KLIDDVTSNDLSWINDGYLAGVDIDLSRICAASQENEGRQKRGR 58

Query: 323 NESCGGLGSKACREKMRRDKLNDRFADLSSALEPGRPAKTDKSAILSDAIRVLNQLRTES 502
           N+S    G+KACREK+RR++LNDRF DLSS LEPG+ AKTDK AIL DAIRVLNQLR E+
Sbjct: 59  NDSSTRPGTKACREKLRRERLNDRFLDLSSILEPGKSAKTDKLAILGDAIRVLNQLRNEA 118

Query: 503 QELKEANEKLQEDIXXXXXXXXXXXXXXXXXXXDKERIEQQMKAMAIVPGGIVPPHP-AT 679
           ++L++ANEKLQE+I                   DKERIEQQMKA++    G  P +P AT
Sbjct: 119 KDLEDANEKLQEEIRSLKAEKNELREEKLLLKADKERIEQQMKAISAPAAGFWPTYPAAT 178

Query: 680 YQAGVNKFMAFPSYGGYPMWQYIPPASLDTSQDHVLRPPVA 802
           +  G NK   FPSYG +PMWQYIP ++LDTS DH LRPP A
Sbjct: 179 HHTGANKSAVFPSYGLFPMWQYIPSSALDTSHDHELRPPAA 219