BLASTX nr result

ID: Coptis25_contig00014000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014000
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888410.1| hypothetical protein ARALYDRAFT_894101 [Arab...    59   5e-07
gb|AAB60903.1| F5I14.2 gene product [Arabidopsis thaliana]             58   7e-07
ref|NP_001185320.1| chromatin assembly factor-1 (FASCIATA1) [Ara...    58   7e-07
gb|ADK74335.1| chromatin assembly factor-1 [Arabidopsis thaliana]      58   7e-07
emb|CAM34516.1| Fasciata 1 protein [Arabidopsis thaliana]              58   7e-07

>ref|XP_002888410.1| hypothetical protein ARALYDRAFT_894101 [Arabidopsis lyrata subsp.
           lyrata] gi|297334251|gb|EFH64669.1| hypothetical protein
           ARALYDRAFT_894101 [Arabidopsis lyrata subsp. lyrata]
          Length = 814

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 10/80 (12%)
 Frame = -2

Query: 211 KKVNKRKRD-----SLSVLDKESRIDQLKKEIDGLFKYFKEVSDQN-----VIIIDDVSS 62
           KK NKRKR+     +L+  +KE++I  L  E+ GLF YF+EV DQ+          + SS
Sbjct: 20  KKPNKRKREPAAVENLTSEEKEAQISSLNLEMKGLFAYFREVMDQSKRTDLFSRFSECSS 79

Query: 61  VNSVIACLLEGSNLPYSKLV 2
           VNS++A L+E  +LP SKLV
Sbjct: 80  VNSMVALLMEEMSLPLSKLV 99


>gb|AAB60903.1| F5I14.2 gene product [Arabidopsis thaliana]
          Length = 406

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 10/80 (12%)
 Frame = -2

Query: 211 KKVNKRKRD-----SLSVLDKESRIDQLKKEIDGLFKYFKEVSDQNVII-----IDDVSS 62
           KK+NKRKR+     +L+  +KES+I  L  E+ GLF YF+EV D++          + SS
Sbjct: 20  KKLNKRKREPTAIENLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRTDLFSGFSECSS 79

Query: 61  VNSVIACLLEGSNLPYSKLV 2
           +NS++A L+E  +LP SKLV
Sbjct: 80  LNSMVALLMEEMSLPLSKLV 99


>ref|NP_001185320.1| chromatin assembly factor-1 (FASCIATA1) [Arabidopsis thaliana]
           gi|332196259|gb|AEE34380.1| chromatin assembly factor-1
           (FASCIATA1) [Arabidopsis thaliana]
          Length = 807

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 10/80 (12%)
 Frame = -2

Query: 211 KKVNKRKRD-----SLSVLDKESRIDQLKKEIDGLFKYFKEVSDQNVII-----IDDVSS 62
           KK+NKRKR+     +L+  +KES+I  L  E+ GLF YF+EV D++          + SS
Sbjct: 20  KKLNKRKREPTAIENLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRTDLFSGFSECSS 79

Query: 61  VNSVIACLLEGSNLPYSKLV 2
           +NS++A L+E  +LP SKLV
Sbjct: 80  LNSMVALLMEEMSLPLSKLV 99


>gb|ADK74335.1| chromatin assembly factor-1 [Arabidopsis thaliana]
          Length = 763

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 10/80 (12%)
 Frame = -2

Query: 211 KKVNKRKRD-----SLSVLDKESRIDQLKKEIDGLFKYFKEVSDQNVII-----IDDVSS 62
           KK+NKRKR+     +L+  +KES+I  L  E+ GLF YF+EV D++          + SS
Sbjct: 20  KKLNKRKREPTAIENLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRTDLFSGFSECSS 79

Query: 61  VNSVIACLLEGSNLPYSKLV 2
           +NS++A L+E  +LP SKLV
Sbjct: 80  LNSMVALLMEEMSLPLSKLV 99


>emb|CAM34516.1| Fasciata 1 protein [Arabidopsis thaliana]
          Length = 145

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 10/80 (12%)
 Frame = -2

Query: 211 KKVNKRKRD-----SLSVLDKESRIDQLKKEIDGLFKYFKEVSDQNVII-----IDDVSS 62
           KK+NKRKR+     +L+  +KES+I  L  E+ GLF YF+EV D++          + SS
Sbjct: 20  KKLNKRKREPTAIENLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRTDLFSGFSECSS 79

Query: 61  VNSVIACLLEGSNLPYSKLV 2
           +NS++A L+E  +LP SKLV
Sbjct: 80  LNSMVALLMEEMSLPLSKLV 99


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