BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013958
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methy...    61   8e-08
emb|CBI24149.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_003570303.1| PREDICTED: ribosomal RNA large subunit methy...    59   5e-07
ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methy...    58   7e-07

>ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Vitis vinifera]
          Length = 507

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/44 (72%), Positives = 35/44 (79%), Gaps = 3/44 (6%)
 Frame = -1

Query: 497 KLAPRRK---GTSGMYGNLNSLAM*ITKRGGLLVTCSCSEAWTQ 375
           KLAPRRK     SGMY NLNSLAM +T+RGGLL+TCSCS A TQ
Sbjct: 413 KLAPRRKVLQSASGMYRNLNSLAMQLTRRGGLLMTCSCSGAMTQ 456


>emb|CBI24149.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/44 (72%), Positives = 35/44 (79%), Gaps = 3/44 (6%)
 Frame = -1

Query: 497 KLAPRRK---GTSGMYGNLNSLAM*ITKRGGLLVTCSCSEAWTQ 375
           KLAPRRK     SGMY NLNSLAM +T+RGGLL+TCSCS A TQ
Sbjct: 293 KLAPRRKVLQSASGMYRNLNSLAMQLTRRGGLLMTCSCSGAMTQ 336


>ref|XP_003570303.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Brachypodium distachyon]
          Length = 448

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/44 (68%), Positives = 34/44 (77%), Gaps = 3/44 (6%)
 Frame = -1

Query: 497 KLAPRRK---GTSGMYGNLNSLAM*ITKRGGLLVTCSCSEAWTQ 375
           KLAPR+K     SGMY NLN+LAM + KRGGLL+TCSCS A TQ
Sbjct: 354 KLAPRKKVLQSASGMYRNLNALAMQVVKRGGLLMTCSCSGAMTQ 397


>ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|222864118|gb|EEF01249.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 3/44 (6%)
 Frame = -1

Query: 497 KLAPRRK---GTSGMYGNLNSLAM*ITKRGGLLVTCSCSEAWTQ 375
           KLAPR+K     SGMY N+NS+A+ +TKRGGLL+TCSCS A TQ
Sbjct: 293 KLAPRKKVLQNASGMYRNMNSMALRLTKRGGLLMTCSCSGAMTQ 336


>ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Glycine max]
          Length = 444

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/44 (70%), Positives = 34/44 (77%), Gaps = 3/44 (6%)
 Frame = -1

Query: 497 KLAPRRK---GTSGMYGNLNSLAM*ITKRGGLLVTCSCSEAWTQ 375
           KLAP +K     SGMY NLNSLAM +TKRGGLL+TCSCS A TQ
Sbjct: 350 KLAPTKKVLHSASGMYRNLNSLAMQLTKRGGLLMTCSCSGAVTQ 393