BLASTX nr result
ID: Coptis25_contig00013955
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00013955
(2165 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40063.3| unnamed protein product [Vitis vinifera] 308 3e-81
ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 prote... 271 5e-70
gb|ADE75737.1| unknown [Picea sitchensis] 192 3e-46
ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putativ... 181 7e-43
ref|XP_003553237.1| PREDICTED: uncharacterized protein LOC100810... 160 1e-36
>emb|CBI40063.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 308 bits (790), Expect = 3e-81
Identities = 228/668 (34%), Positives = 333/668 (49%), Gaps = 53/668 (7%)
Frame = +3
Query: 99 MFYSQCLLSKKGTLKSIWVAAYFHKKLKKQQVADTHIPSSVDMIILNEVS-XXXXXXXXX 275
MF SQ LLS+KG L+S+W AAYFHKKLKK QV T+I SSVD I+++EV
Sbjct: 1 MFESQSLLSRKGALRSVWEAAYFHKKLKKAQVTQTNISSSVDKILVDEVPVLAYRILGYI 60
Query: 276 XXXXXXIFSKKVEYLYHDCSEVLTKIKTYT---PLHKPKEGMCASYASITIPERFELDGF 446
I+SKKVEYL+ DC ++L K+K + + EG A SIT+P+ FELD F
Sbjct: 61 LLGVVRIYSKKVEYLFDDCQKMLIKVKDFAVGKQFNADMEGFSAPCFSITLPKTFELDAF 120
Query: 447 DLELPDDMNGGSVLPNQKITLE--------------------------------ERLEDA 530
DLE+ +D++GG+V P ++ITL+ + L++
Sbjct: 121 DLEVLEDVSGGNVRPQEEITLQGSTQLYVNSFYLTLNNFFFFLFILLHFIFGAADTLKNE 180
Query: 531 GNEQYFMNKYFHEEEFARFEIRDVVHTPVRDALSPQSMEKYTEIFQSQIVTNSEASLEKL 710
G YF+++Y E+ ++ E + P D L P M+ + +++ EAS+EK
Sbjct: 181 GIRHYFLDQYRFEDVASQPETCSTISPPDEDFLLPCLMDTAQLVSSLHDLSSIEASMEKF 240
Query: 711 QG---HPKEFPDIE----TNCEAEEPMDRFPDVGLNGEDE--ESMDLEPQFNKVDGQAKQ 863
+ E D++ + P D + NGE E E + ++V +
Sbjct: 241 RDCSFSQGECLDLQLFHRVEIDIGGPFD--GEHHSNGEQTSLEMTSSENRRHQVTIECHS 298
Query: 864 IRN-LEITPLDPEKSGIPTEGGLAAITTDGTPHGSSFPYDSGAATPEFVVIQTPAKKEQP 1040
+ N + TP K + EG T D TP S+ P SG+ TPEF+++ TP KKE
Sbjct: 299 VPNTFDATP--QSKLQVTAEGHRVTNTLDATPE-SNLPDASGSTTPEFIIVHTPTKKEHA 355
Query: 1041 RFSRKRKHLIDNMMVLANEVIRKSLEDSSSLVVKRRKVPATALDVWNAQIFTNQYQNFLE 1220
R RKRK L D +VL++E ++KS++ SS L+ KRRKVP TA D W N Q FLE
Sbjct: 356 RIPRKRKCLFDEKIVLSSEFLKKSIQSSSDLIRKRRKVPHTAYDAWKVYQIANLSQGFLE 415
Query: 1221 PLIPC-TPQLKTLFH-RRIGAPE---PLEASEGAVKLGEERCVPQRECSEDRTCSQENVI 1385
LIPC + +L++LFH +++ PE +EA +G V G +
Sbjct: 416 ALIPCISLELRSLFHAKKLMTPELVVNVEAPDGLVVPGSP------------------TV 457
Query: 1386 NHSSRRSVEIPPEPLQASEGPVMLGEDRCEPNRECSEDRACSQQNVIDHSRRPAEIPETS 1565
N + + P P S ++G +E+ + +
Sbjct: 458 NQLLKETAIAPETPAIHS---TLMG---------------------------VSEVHKLT 487
Query: 1566 KSDRIVPMTLLSGGEDGLLETETQSSGLNLMDEELGPQEDNNSNNQNGWTVRTRMVASFL 1745
SDR+VP + + +E + + LM+EE+ E N NGW+ RT MVA +L
Sbjct: 488 DSDRVVPASSFESSQQRQSSSENEEFDI-LMNEEINSCEVAN-QKINGWSDRTGMVARYL 545
Query: 1746 CKRFL--KEPGKAEVLNLNLILEGKTRKENARLFYEILVLKSEGLVDVKQDTPYGDICVL 1919
C+ FL K+ G + L+ L GKT+KE++RLFYEILVLKS+G VDV+Q+ YGDI V+
Sbjct: 546 CRSFLNQKKQGDENAVTLSQFLTGKTKKESSRLFYEILVLKSKGYVDVEQNNAYGDIRVM 605
Query: 1920 NTPQMATV 1943
T QM +V
Sbjct: 606 KTLQMESV 613
>ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Vitis
vinifera]
Length = 756
Score = 271 bits (693), Expect = 5e-70
Identities = 196/570 (34%), Positives = 293/570 (51%), Gaps = 20/570 (3%)
Frame = +3
Query: 294 IFSKKVEYLYHDCSEVLTKIKTYT---PLHKPKEGMCASYASITIPERFELDGFDLELPD 464
I+SKKVEYL+ DC ++L K+K + + EG A SIT+P+ FELD FDLE+ +
Sbjct: 234 IYSKKVEYLFDDCQKMLIKVKDFAVGKQFNADMEGFSAPCFSITLPKTFELDAFDLEVLE 293
Query: 465 DMNGGSVLPNQKITLEERLEDAGNEQYFMNKYFHEEEFARFEIRDVVHTPVRDALSPQSM 644
D++GG+V P ++ITL++ L++ G YF+++Y E+ ++ E + P D L P M
Sbjct: 294 DVSGGNVRPQEEITLQDTLKNEGIRHYFLDQYRFEDVASQPETCSTISPPDEDFLLPCLM 353
Query: 645 EKYTEIFQSQIVTNSEASLEKLQG---HPKEFPDIETNCEAE----EPMDRFPDVGLNGE 803
+ + +++ EAS+EK + E D++ E P D + NGE
Sbjct: 354 DTAQLVSSLHDLSSIEASMEKFRDCSFSQGECLDLQLFHRVEIDIGGPFDG--EHHSNGE 411
Query: 804 DE--ESMDLEPQFNKVDGQAKQIRN-LEITPLDPEKSGIPTEGGLAAITTDGTPHGSSFP 974
E E + ++V + + N + TP K + EG T D TP S+ P
Sbjct: 412 QTSLEMTSSENRRHQVTIECHSVPNTFDATP--QSKLQVTAEGHRVTNTLDATPE-SNLP 468
Query: 975 YDSGAATPEFVVIQTPAKKEQPRFSRKRKHLIDNMMVLANEVIRKSLEDSSSLVVKRRKV 1154
SG+ TPEF+++ TP KKE R RKRK L D +VL++E ++KS++ SS L+ KRRKV
Sbjct: 469 DASGSTTPEFIIVHTPTKKEHARIPRKRKCLFDEKIVLSSEFLKKSIQSSSDLIRKRRKV 528
Query: 1155 PATALDVWNAQIFTNQYQNFLEPLIPC-TPQLKTLFH-RRIGAPE---PLEASEGAVKLG 1319
P TA D W N Q FLE LIPC + +L++LFH +++ PE +EA +G V G
Sbjct: 529 PHTAYDAWKVYQIANLSQGFLEALIPCISLELRSLFHAKKLMTPELVVNVEAPDGLVVPG 588
Query: 1320 EERCVPQRECSEDRTCSQENVINHSSRRSVEIPPEPLQASEGPVMLGEDRCEPNRECSED 1499
+N + + P P S ++G
Sbjct: 589 SP------------------TVNQLLKETAIAPETPAIHS---TLMG------------- 614
Query: 1500 RACSQQNVIDHSRRPAEIPETSKSDRIVPMTLLSGGEDGLLETETQSSGLNLMDEELGPQ 1679
+E+ + + SDR+VP + + +E + + LM+EE+
Sbjct: 615 --------------VSEVHKLTDSDRVVPASSFESSQQRQSSSENEEFDI-LMNEEINSC 659
Query: 1680 EDNNSNNQNGWTVRTRMVASFLCKRFL--KEPGKAEVLNLNLILEGKTRKENARLFYEIL 1853
E N NGW+ RT MVA +LC+ FL K+ G + L+ L GKT+KE++RLFYEIL
Sbjct: 660 EVAN-QKINGWSDRTGMVARYLCRSFLNQKKQGDENAVTLSQFLTGKTKKESSRLFYEIL 718
Query: 1854 VLKSEGLVDVKQDTPYGDICVLNTPQMATV 1943
VLKS+G VDV+Q+ YGDI V+ T QM +V
Sbjct: 719 VLKSKGYVDVEQNNAYGDIRVMKTLQMESV 748
Score = 60.8 bits (146), Expect = 1e-06
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = +3
Query: 99 MFYSQCLLSKKGTLKSIWVAAYFHKKLKKQQVADTHIPSSV 221
MF SQ LLS+KG L+S+W AAYFHKKLKK QV T+I SSV
Sbjct: 110 MFESQSLLSRKGALRSVWEAAYFHKKLKKAQVTQTNISSSV 150
>gb|ADE75737.1| unknown [Picea sitchensis]
Length = 678
Score = 192 bits (488), Expect = 3e-46
Identities = 199/690 (28%), Positives = 310/690 (44%), Gaps = 78/690 (11%)
Frame = +3
Query: 99 MFYSQCLLSKKGTLKSIWVAAYFHKKLKKQQVADTHIPSSVDMIILNEVSXXXXXXXXXX 278
MFYS +L+KKG L ++W+AA+ +KL+K QV +T+I +SVD I+ EV
Sbjct: 1 MFYSHFILAKKGPLGTVWIAAHLERKLRKNQVTETNISASVDSIMFPEVPIALRLSGHLL 60
Query: 279 XXXXXIFSKKVEYLYHDCSEVLTKIK---TYTPLHKPKEGMCASYASITIPERFELDGFD 449
I+SKKV YLY DCS+ L KIK + P A + SIT+PE FE D +
Sbjct: 61 LGVVRIYSKKVNYLYQDCSDALAKIKQAFNSVQVDLPPGATSAPFHSITLPETFEFDDME 120
Query: 450 LELPDDMNGGSVLPNQKITL-------EERLEDAGNEQ-------YFMNKYFHEEEFARF 587
EL + V +ITL + R +EQ Y M E R
Sbjct: 121 EELRYGIPDMHVTTRDQITLSHWPQGFDARPHFGPDEQVPGRVDPYTMIYLDEESRIHRS 180
Query: 588 EIRDVVHTPV-----RDALSPQSMEKYTEIFQSQIVTNS-EASLEKLQGHP--KEFPDIE 743
R +P+ D L P M+ + Q I N E + L P + P+ E
Sbjct: 181 PPRPQFPSPLIPSMEEDVLPPLPMDDTMGLDQMDIEINGLEEAARGLTEEPLHEHIPERE 240
Query: 744 TNCEAEEPMDRFPDVGLNGEDEESMDLEPQFNKVDGQAKQIRNLEITPLDPEKSGIPTEG 923
T A + P + + E E S ++ ++V+GQ ++ ++E P IP G
Sbjct: 241 TLRSAVGIPQQEPFLIGSEEVERSTEIG---DEVEGQ--RMDDIE----RPVLEEIPVLG 291
Query: 924 -GLAAITTDGTPHGSSFPYDS-----------GAATPEFVVIQTPAK----KEQPRFSRK 1055
G A TP P ++ G +P V+ TP K +E+ + SRK
Sbjct: 292 DGTPAFEWGRTPSSRRTPGETPGNEDLLTTALGGMSPALTVMPTPTKSPAPEEKRKRSRK 351
Query: 1056 RKHLIDNMMVLANEVIRKSLEDSSSLVVKRRKVPATALDVWNAQIFTNQYQNFLEPLIP- 1232
++ L D +VL+N+ ++K LED+ L R +V + L++W A ++ Q+F EP +P
Sbjct: 352 KRPLFDESIVLSNKFMKKQLEDTDDLCRTRTRVLCSKLEIWKAYRNSHIQQSFSEPSLPG 411
Query: 1233 CTPQLKTLFHR-------RIGAPEPLEAS--EGAVKLGEERCVPQRECSEDRTCSQENV- 1382
+ L+ +F + R+ EP EG + + P+ E + E V
Sbjct: 412 MSTDLQEIFKKVFTGQGVRVAFAEPPTTGFREGHEESPKSPQAPEIETTRLAPPEVEAVS 471
Query: 1383 -INHSSRRSVEIP--------------PEPLQASEGPVMLGEDRCEPNRECSEDRACSQQ 1517
+ + +E P PE L+ E V LGE R + + E SQ
Sbjct: 472 PVGFGTPYRMEEPTFQATEEIELEAQMPEVLE-PEVIVELGEVRTDEPTDL-EFETPSQH 529
Query: 1518 NVIDHSRRP-AEIPETSKSDRIVPMTLLSGGEDGL--LETETQ-SSGLNLMDEELGPQ-- 1679
+ + + P E+P S G+ GL LE +++ ++ + +++E +
Sbjct: 530 GLGEAEQVPLEEVPSVGLS------VYEEEGDQGLKFLEEDSRYAASVAAVEQEFNEEPG 583
Query: 1680 -----EDNNSNNQNGWTVRTRMVASFLCKRFLKEPGKAEVLNLNLILEGKTRKENARLFY 1844
+ ++ GW+VRTR VA +L F K E LNL +L +TRKE+AR+F+
Sbjct: 584 MGDAAKRRRVDDSTGWSVRTRAVAQYLQAAFQKLDTSQEKLNLGQMLARRTRKESARMFF 643
Query: 1845 EILVLKSEGLVDVKQDTPYGDICVLNTPQM 1934
E LVLKS+ ++VKQ+ PY DI + TP++
Sbjct: 644 ETLVLKSKDYLEVKQEEPYADILLSPTPKL 673
>ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis]
gi|223549451|gb|EEF50939.1| Sister chromatid cohesion 1
protein, putative [Ricinus communis]
Length = 781
Score = 181 bits (459), Expect = 7e-43
Identities = 156/467 (33%), Positives = 219/467 (46%), Gaps = 49/467 (10%)
Frame = +3
Query: 678 VTNSEASLEKLQGH---PKEFPDIETNCEAEEPMDR---FPDVGLNGE--------DEES 815
++N E S+EKL+ + +E DIE C EEP + PD + DE
Sbjct: 309 ISNLEVSIEKLRENMVAQEECRDIEMFCMVEEPPEENRSIPDKHKSNTEHKMLYRVDELP 368
Query: 816 MDLEPQFNKVDGQAKQIRNLEITPLDPEKSGIPTEGGLAAITTDGTPHGSSFPYDSGAAT 995
D P + A+ L++T TE ++T D TP FP SGA T
Sbjct: 369 EDTRPFGEEHQSSAEHETLLQMTSPRNSTYEALTEDHPLSVTLDTTPR-PRFPNASGAMT 427
Query: 996 PEFVVIQTPAKKEQPRFSRKRKHLIDNMMVLANEVIRKSLEDSSSLVVKRRKVPATALDV 1175
PE VI TPA KE R RKRK + D+ +V N VI++ +EDSS LV KR+K P TAL
Sbjct: 428 PEISVIPTPAAKEGARVPRKRKCVFDDTIVFPNNVIKQCIEDSSDLVSKRKKAPHTALTA 487
Query: 1176 WNAQIFTNQYQNFLEPLIPCT-PQLKTLFHRR---------------------------- 1268
W A + + FLE LIPCT L++L +
Sbjct: 488 WRASRVSRLPRCFLESLIPCTASDLRSLLSGKKLKISESLDTVRVPQTFTSECPTARRSV 547
Query: 1269 --IGAPEPLEASEGAVKLGEERCVPQRECSEDRTCSQENVINHSSRRSVEIPPEPLQASE 1442
+ +PE L+ S+ V + R V + E S ++ ++VE P L SE
Sbjct: 548 ETVESPEKLDKSKILV---DGRLVETMDSLEKLNVSASPAVDRQG-KTVE-PRATLGMSE 602
Query: 1443 GPVMLGEDRCEPNRECSEDRACSQQNVI-DHSRRPAEIPETSKSDRIVPMTLLSGG-EDG 1616
P + R ++R + ++ S R E PE + + + L S E
Sbjct: 603 SPTAI--------RSLEQERIAPETPILHTKSLRTFESPERPEISNLDRVRLESERVEKE 654
Query: 1617 LLETETQSSGLNLMDEELGPQEDNNSNNQNGWTVRTRMVASFLCKRFLKEPGK--AEVLN 1790
L ++ LN+M+EE+ E +N NQ GW+ RTR+ L + FLK+ + EV+N
Sbjct: 655 LSPSKGHELDLNMMNEEISSDEGDN-QNQYGWSGRTRVAVRCLHRSFLKQKNRREEEVVN 713
Query: 1791 LNLILEGKTRKENARLFYEILVLKSEGLVDVKQDTPYGDICVLNTPQ 1931
L +LEG+ +KE+ARLFYEILVLKS+G V VKQ+ YGDI V Q
Sbjct: 714 LLSLLEGRAKKESARLFYEILVLKSKGYVHVKQENAYGDILVWKASQ 760
Score = 133 bits (335), Expect = 2e-28
Identities = 88/235 (37%), Positives = 126/235 (53%), Gaps = 5/235 (2%)
Frame = +3
Query: 99 MFYSQCLLSKKGTLKSIWVAAYFHKKLKKQQVADTHIPSSVDMIILNEV-SXXXXXXXXX 275
MFYS LS+KG L +IWVAAY KKLKK QV T I SSVD I+ +E +
Sbjct: 1 MFYSHSFLSRKGPLGAIWVAAYCFKKLKKAQVTQTDIASSVDKILQDEFDAVTYRVLAYL 60
Query: 276 XXXXXXIFSKKVEYLYHDCSEVLTKIKTYTPLHKPK---EGMCASYASITIPERFELDGF 446
IFSKKVEYL+ DC++VL KIK + +K + E +CA Y+SIT+PERFELD F
Sbjct: 61 LLGVVRIFSKKVEYLFDDCNKVLLKIKDFMVRNKERALMETLCAPYSSITLPERFELDAF 120
Query: 447 DLELPDDMNGGSVLPNQKITLEERLEDAGNEQYFMNKYFHEEEFARFEIRDVVHTPVRDA 626
+LE+ +D++GG+V+P++ IT+++ + G A
Sbjct: 121 NLEIIEDISGGNVVPSEDITVKDGMWKTG------------------------------A 150
Query: 627 LSPQSMEKYTEIFQSQIVTNSEASLEKLQGHPKEFPDIETN-CEAEEPMDRFPDV 788
+ P S++K I + + L L+ + + D E N CE+ E ++ FP V
Sbjct: 151 IVPYSLDKVYVIKSFYLTYCTSHYLSSLEASTENYLDNEPNQCESME-LEMFPMV 204
>ref|XP_003553237.1| PREDICTED: uncharacterized protein LOC100810733 [Glycine max]
Length = 882
Score = 160 bits (406), Expect = 1e-36
Identities = 159/569 (27%), Positives = 250/569 (43%), Gaps = 22/569 (3%)
Frame = +3
Query: 294 IFSKKVEYLYHDCSEVLTKIKTYTPLHKPKEGMCASYA---SITIPERFELDGFDLELPD 464
IFSKKVEY+ DC+EVL KI + KEG+ +TIP+R ELD F+L+ +
Sbjct: 19 IFSKKVEYVLEDCNEVLIKINKFVV---NKEGIVRVETLRMPVTIPDRLELDVFELDELE 75
Query: 465 DMNGGSVLPNQKITLEERLEDAGNEQYFMNKYFHEEEFARFEIRDVVHTPVRDALSPQSM 644
+++ G P ++ITL ++ E + + F E+F F++ +
Sbjct: 76 NVDRGHTAPPEEITLRDKENVCKTEGFGL---FSHEKFEEFDVAE--------------- 117
Query: 645 EKYTEIFQSQIVTNSEASLEKLQGHPKEFPDIETNCEAEEPMDRFPDVGLNGEDEESMDL 824
T F IV N A L KL DIE + P + D+ L D+ +
Sbjct: 118 --NTSSFDQDIVGN--AFLSKLLN----MMDIEVS-----PQNSPTDLLLESWDKFQSSI 164
Query: 825 EPQFNKVDGQAKQIRNLEITPLDPEK-SGIPTEGGLAAITTDGTPHGSSFPYDSGAATPE 1001
KV P++ E+ S IP + T G P +ATPE
Sbjct: 165 SAFQEKV-------------PIEDERLSVIPPKSKNLDATPQSKFQGVGRPKQD-SATPE 210
Query: 1002 FVVIQTPAKKEQPRFSRKRKHLIDNMMVLANEVIRKSLEDSSSLV-------VKRRKVPA 1160
+ + TPA +EQP FSRKR+ +D M+VL+N+ + K+++ + LV +R + A
Sbjct: 211 SMHVSTPAVREQPPFSRKRRVGLDRMIVLSNKAVIKNIKSAKDLVRFPFPRESRRTLLNA 270
Query: 1161 TALDVWNAQIFTNQYQNFLEPLIPC-TPQLKTLF-HRRIGAPEPLEASEGAVKLGEERCV 1334
+ ++ F EPL+PC + +L+ LF +++ P L+ E
Sbjct: 271 HCVQRQRESPISSLPNRFYEPLLPCSSSELQLLFSKKKMKLPNSLKIVE----------- 319
Query: 1335 PQRECSEDRTCSQENVINHSSRRSVEIPPEPLQASEGPVMLGEDRCEPNRECSEDRACSQ 1514
+ ++++P P+ + D E
Sbjct: 320 --------------------TPGNLDVPESPIAGTPLSPSQSSDSLE------------- 346
Query: 1515 QNVIDHSRRPAEIPETSKS--------DRIVPMTLLSGGEDGLLETETQSSGLNLMDEEL 1670
I+ +RR ++PE+ S D P LS E+ +E+ + NLMDEE
Sbjct: 347 ---IEETRRVLDVPESQASGFPKHKATDSQTPP--LSQHENIEIESLETNEVPNLMDEET 401
Query: 1671 GPQEDNNSNNQNGWTVRTRMVASFLCKRFL-KEPGKAEVLNLNLILEGKTRKENARLFYE 1847
+ N S GW+ RTR VAS L + FL + + +N + + G+ RKE+A LFYE
Sbjct: 402 NSRGTNESELLAGWSGRTREVASCLHQSFLHARKQREDTVNFSQVFGGRARKESALLFYE 461
Query: 1848 ILVLKSEGLVDVKQDTPYGDICVLNTPQM 1934
+LVLK+ G VDV+Q+ YGDI + P++
Sbjct: 462 VLVLKTTGYVDVEQNKAYGDIAISRLPKL 490