BLASTX nr result

ID: Coptis25_contig00013952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013952
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547145.1| PREDICTED: uncharacterized protein LOC100812...    55   3e-14
ref|XP_002282367.2| PREDICTED: uncharacterized protein LOC100255...    55   2e-13
ref|XP_003593573.1| hypothetical protein MTR_2g013640 [Medicago ...    60   4e-13
ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250...    59   4e-13
ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260...    55   2e-12

>ref|XP_003547145.1| PREDICTED: uncharacterized protein LOC100812795 [Glycine max]
          Length = 706

 Score = 55.5 bits (132), Expect(2) = 3e-14
 Identities = 21/39 (53%), Positives = 31/39 (79%)
 Frame = +3

Query: 279 SMDCEIQINIQFRPLNSKSSSYVKGTVESTRRRLDPFYF 395
           ++DCEI +N+QF PLN+K    + GT+ESTR++ DP+YF
Sbjct: 344 TLDCEIMVNVQFPPLNAKGGESLTGTIESTRQKSDPYYF 382



 Score = 47.4 bits (111), Expect(2) = 3e-14
 Identities = 36/92 (39%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
 Frame = +1

Query: 1   YSVPLSVGDQFYE---QGVPIIEFDAVTPKSSVQVIH*HLKGLLNVSYSLSL--APDYNV 165
           YS PLSV DQ Y     G P +      PK+       +   LLNVSY++SL   PD+  
Sbjct: 243 YSSPLSVCDQIYSGQSYGAPFV-LTTGKPKAHATQSDKY-SNLLNVSYTISLNPPPDFKF 300

Query: 166 GGAPF*KKTSLISTRTDISAEGVYNPETGSLC 261
           G         + ST+  I AEG+YN  TG LC
Sbjct: 301 G-------RGVSSTKVKIGAEGIYNRNTGVLC 325


>ref|XP_002282367.2| PREDICTED: uncharacterized protein LOC100255441 [Vitis vinifera]
          Length = 981

 Score = 54.7 bits (130), Expect(2) = 2e-13
 Identities = 22/39 (56%), Positives = 31/39 (79%)
 Frame = +3

Query: 279 SMDCEIQINIQFRPLNSKSSSYVKGTVESTRRRLDPFYF 395
           SMDCEI +++ F PLNS++ SY+KG++ESTR   DP +F
Sbjct: 614 SMDCEILLSLLFSPLNSRNGSYIKGSIESTRHESDPLHF 652



 Score = 45.8 bits (107), Expect(2) = 2e-13
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
 Frame = +1

Query: 4   SVPLSVGDQFYEQGVPIIEFDAVTPKSSVQ---VIH*HLK--GLLNVSYSLS--LAPDYN 162
           S PL VG+ FY+   P++ F+  +  SS+Q    +  H +  G  N+SY +S  L P   
Sbjct: 505 SAPLFVGEIFYD---PLVSFEPFSLSSSMQENSAVESHSRRIGPENISYKMSFKLKPGPE 561

Query: 163 VGGA--PF*KKTSLISTRTDISAEGVYNPETGSLC 261
             G   PF   +S +  + +ISAEG+Y  +TG LC
Sbjct: 562 SDGIINPFSSSSSGMYLQVEISAEGIYEAKTGFLC 596


>ref|XP_003593573.1| hypothetical protein MTR_2g013640 [Medicago truncatula]
           gi|355482621|gb|AES63824.1| hypothetical protein
           MTR_2g013640 [Medicago truncatula]
          Length = 937

 Score = 60.1 bits (144), Expect(2) = 4e-13
 Identities = 23/39 (58%), Positives = 32/39 (82%)
 Frame = +3

Query: 279 SMDCEIQINIQFRPLNSKSSSYVKGTVESTRRRLDPFYF 395
           S+DCEI +NIQF PLN+K   ++KGT+ES R++ DP+YF
Sbjct: 574 SLDCEIMVNIQFPPLNAKGGEFIKGTIESMRQKADPYYF 612



 Score = 38.9 bits (89), Expect(2) = 4e-13
 Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
 Frame = +1

Query: 1   YSVPLSVGDQFYE---QGVPIIEFDAVTPKSSVQVIH*HLKGLLNVSYSLS--LAPDYNV 165
           YS PL VGD+ Y     GVP +  +      S Q         LNVSY +   L+PD+  
Sbjct: 476 YSSPLFVGDRRYNGQPYGVPFVPTNGNLKAHSSQY-----NNSLNVSYMIKFKLSPDFK- 529

Query: 166 GGAPF*KKTSLISTRTDISAEGVYNPETGSLC 261
               F  + S  +T+  I AEG+YN  TG +C
Sbjct: 530 ----FDSEGS--ATKVKIIAEGLYNRNTGVMC 555


>ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250261 [Vitis vinifera]
          Length = 932

 Score = 59.3 bits (142), Expect(2) = 4e-13
 Identities = 25/44 (56%), Positives = 34/44 (77%)
 Frame = +3

Query: 264 TSNLHSMDCEIQINIQFRPLNSKSSSYVKGTVESTRRRLDPFYF 395
           TS+  SMDCEI +N+QF  LNSK+  Y+KG+++STR + DP YF
Sbjct: 580 TSSNDSMDCEILVNLQFPQLNSKNRGYIKGSIQSTREKSDPLYF 623



 Score = 39.7 bits (91), Expect(2) = 4e-13
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 14/101 (13%)
 Frame = +1

Query: 1   YSVPLSVGDQFY-----------EQGVPIIEFDAVTPKSSVQVIH*HLKGLLNVSY--SL 141
           YS  +++GD+FY           E  V +    A TP++S +      + + NVSY  SL
Sbjct: 468 YSELITLGDRFYDRYAQSIVSLEESSVAVATSSASTPENSFETNASDSRPM-NVSYRISL 526

Query: 142 SLAPDYNVGGAPF*KKT-SLISTRTDISAEGVYNPETGSLC 261
           +L P    G         S I T  +ISAEG+Y+ +TG LC
Sbjct: 527 TLEPGVKFGDMIISPSNFSGIYTPVEISAEGIYDAKTGFLC 567


>ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260511 [Vitis vinifera]
           gi|302143014|emb|CBI20309.3| unnamed protein product
           [Vitis vinifera]
          Length = 916

 Score = 55.1 bits (131), Expect(2) = 2e-12
 Identities = 22/39 (56%), Positives = 30/39 (76%)
 Frame = +3

Query: 279 SMDCEIQINIQFRPLNSKSSSYVKGTVESTRRRLDPFYF 395
           S+DCEI +N+QF PL S +  Y+KG++ESTR + DP YF
Sbjct: 580 SVDCEILVNLQFPPLGSGNEGYIKGSIESTREKSDPLYF 618



 Score = 41.6 bits (96), Expect(2) = 2e-12
 Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
 Frame = +1

Query: 4   SVPLSVGDQFYEQGVPIIEFDAVTPKSSVQVIH*HLKGLLNVSYSLS--LAPDYNVGG-- 171
           + P  VGD  Y+     I   +  P SSV   +      +N+SY +S  L P    GG  
Sbjct: 474 AAPFFVGDNLYDPFEYGIPSSSSEPGSSVVEANARHISPVNISYKISFTLEPGAEFGGII 533

Query: 172 APF*KKTSLISTRTDISAEGVYNPETGSLC 261
           +PF +       + DISAEG+Y+ +TG LC
Sbjct: 534 SPFSESLGR-HMKVDISAEGIYDAKTGGLC 562


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