BLASTX nr result

ID: Coptis25_contig00013941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013941
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282367.2| PREDICTED: uncharacterized protein LOC100255...    69   1e-17
ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250...    78   3e-17
ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260...    74   5e-17
ref|XP_003547145.1| PREDICTED: uncharacterized protein LOC100812...    69   5e-16
ref|XP_003593573.1| hypothetical protein MTR_2g013640 [Medicago ...    76   5e-15

>ref|XP_002282367.2| PREDICTED: uncharacterized protein LOC100255441 [Vitis vinifera]
          Length = 981

 Score = 68.9 bits (167), Expect(2) = 1e-17
 Identities = 30/62 (48%), Positives = 46/62 (74%), Gaps = 4/62 (6%)
 Frame = +2

Query: 317 ETGSLCMVGCRSVKTS----NHHSIDCEIQINIQFRPLNSKSSSYVKGTVESTRGQLDPF 484
           +TG LCMVGCR +++      + S+DCEI +++ F PLNS++ SY+KG++ESTR + DP 
Sbjct: 591 KTGFLCMVGCRKLRSEIQILTNDSMDCEILLSLLFSPLNSRNGSYIKGSIESTRHESDPL 650

Query: 485 YF 490
           +F
Sbjct: 651 HF 652



 Score = 45.8 bits (107), Expect(2) = 1e-17
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
 Frame = +3

Query: 3   SWGYSVPLSVGDQFYEQGGPIIEFDAVTPESSVQ---VIDKHLK--GLLNVSYSLS--LA 161
           +WG S PL VG+ FY+   P++ F+  +  SS+Q    ++ H +  G  N+SY +S  L 
Sbjct: 501 AWGSSAPLFVGEIFYD---PLVSFEPFSLSSSMQENSAVESHSRRIGPENISYKMSFKLK 557

Query: 162 PDYNVGGA--PFSKKASLISTHADISAEGV 245
           P     G   PFS  +S +    +ISAEG+
Sbjct: 558 PGPESDGIINPFSSSSSGMYLQVEISAEGI 587


>ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250261 [Vitis vinifera]
          Length = 932

 Score = 77.8 bits (190), Expect(2) = 3e-17
 Identities = 36/63 (57%), Positives = 48/63 (76%), Gaps = 4/63 (6%)
 Frame = +2

Query: 317 ETGSLCMVGCRS----VKTSNHHSIDCEIQINIQFRPLNSKSSSYVKGTVESTRGQLDPF 484
           +TG LCMVGCR     VKTS++ S+DCEI +N+QF  LNSK+  Y+KG+++STR + DP 
Sbjct: 562 KTGFLCMVGCRKLSSPVKTSSNDSMDCEILVNLQFPQLNSKNRGYIKGSIQSTREKSDPL 621

Query: 485 YFE 493
           YFE
Sbjct: 622 YFE 624



 Score = 35.4 bits (80), Expect(2) = 3e-17
 Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
 Frame = +3

Query: 6   WGYSVPLSVGDQFY-----------EQGGPIIEFDAVTPESSVQVIDKHLKGLLNVSY-- 146
           W YS  +++GD+FY           E    +    A TPE+S +      +  +NVSY  
Sbjct: 466 WAYSELITLGDRFYDRYAQSIVSLEESSVAVATSSASTPENSFETNASDSRP-MNVSYRI 524

Query: 147 SLSLAPDYNVGGAPFS-KKASLISTHADISAEGV 245
           SL+L P    G    S    S I T  +ISAEG+
Sbjct: 525 SLTLEPGVKFGDMIISPSNFSGIYTPVEISAEGI 558


>ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260511 [Vitis vinifera]
           gi|302143014|emb|CBI20309.3| unnamed protein product
           [Vitis vinifera]
          Length = 916

 Score = 73.9 bits (180), Expect(2) = 5e-17
 Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
 Frame = +2

Query: 317 ETGSLCMVGCRSVKTSNH----HSIDCEIQINIQFRPLNSKSSSYVKGTVESTRGQLDPF 484
           +TG LCMVGCR + +  H     S+DCEI +N+QF PL S +  Y+KG++ESTR + DP 
Sbjct: 557 KTGGLCMVGCRRLSSKAHILTDDSVDCEILVNLQFPPLGSGNEGYIKGSIESTREKSDPL 616

Query: 485 YFE 493
           YFE
Sbjct: 617 YFE 619



 Score = 38.5 bits (88), Expect(2) = 5e-17
 Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
 Frame = +3

Query: 3   SWGYSVPLSVGDQFYEQGGPIIEFDAVTPESSVQVIDKHLKGLLNVSYSLS--LAPDYNV 176
           +WG + P  VGD  Y+     I   +  P SSV   +      +N+SY +S  L P    
Sbjct: 470 AWGSAAPFFVGDNLYDPFEYGIPSSSSEPGSSVVEANARHISPVNISYKISFTLEPGAEF 529

Query: 177 GG--APFSKKASLISTHADISAEGV 245
           GG  +PFS+         DISAEG+
Sbjct: 530 GGIISPFSESLGR-HMKVDISAEGI 553


>ref|XP_003547145.1| PREDICTED: uncharacterized protein LOC100812795 [Glycine max]
          Length = 706

 Score = 68.6 bits (166), Expect(2) = 5e-16
 Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
 Frame = +2

Query: 320 TGSLCMVGCRSVKTSN-----HHSIDCEIQINIQFRPLNSKSSSYVKGTVESTRGQLDPF 484
           TG LCM+GC+ +++++     + ++DCEI +N+QF PLN+K    + GT+ESTR + DP+
Sbjct: 321 TGVLCMIGCQHLRSTDKILIKNETLDCEIMVNVQFPPLNAKGGESLTGTIESTRQKSDPY 380

Query: 485 YFE 493
           YF+
Sbjct: 381 YFD 383



 Score = 40.4 bits (93), Expect(2) = 5e-16
 Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
 Frame = +3

Query: 9   GYSVPLSVGDQFY---EQGGPIIEFDAVTPESSVQVIDKHLKGLLNVSYSLSL--APDYN 173
           GYS PLSV DQ Y     G P +      P++     DK+   LLNVSY++SL   PD+ 
Sbjct: 242 GYSSPLSVCDQIYSGQSYGAPFV-LTTGKPKAHATQSDKY-SNLLNVSYTISLNPPPDFK 299

Query: 174 VGGAPFSKKASLISTHADISAEGV 245
            G         + ST   I AEG+
Sbjct: 300 FG-------RGVSSTKVKIGAEGI 316


>ref|XP_003593573.1| hypothetical protein MTR_2g013640 [Medicago truncatula]
           gi|355482621|gb|AES63824.1| hypothetical protein
           MTR_2g013640 [Medicago truncatula]
          Length = 937

 Score = 75.9 bits (185), Expect(2) = 5e-15
 Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
 Frame = +2

Query: 320 TGSLCMVGCRSVKTSN-----HHSIDCEIQINIQFRPLNSKSSSYVKGTVESTRGQLDPF 484
           TG +C+VGCR ++T+      + S+DCEI +NIQF PLN+K   ++KGT+ES R + DP+
Sbjct: 551 TGVMCLVGCRDLRTNGKILLKNESLDCEIMVNIQFPPLNAKGGEFIKGTIESMRQKADPY 610

Query: 485 YFE 493
           YFE
Sbjct: 611 YFE 613



 Score = 29.6 bits (65), Expect(2) = 5e-15
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = +3

Query: 9   GYSVPLSVGDQFYEQGGPIIEFDAVTPESSVQVIDKHLKGLLNVSYSL--SLAPDYNVGG 182
           GYS PL VGD+ Y   G       V    +++         LNVSY +   L+PD+    
Sbjct: 475 GYSSPLFVGDRRY--NGQPYGVPFVPTNGNLKAHSSQYNNSLNVSYMIKFKLSPDFKFDS 532

Query: 183 APFSKKASLIS 215
              + K  +I+
Sbjct: 533 EGSATKVKIIA 543


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