BLASTX nr result

ID: Coptis25_contig00013928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013928
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]   106   4e-21
ref|XP_002268954.2| PREDICTED: transmembrane protein 184C-like [...   104   1e-20
emb|CBI23472.3| unnamed protein product [Vitis vinifera]              104   1e-20
ref|XP_002521429.1| conserved hypothetical protein [Ricinus comm...   100   2e-19
ref|XP_002305664.1| predicted protein [Populus trichocarpa] gi|2...   100   4e-19

>emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]
          Length = 295

 Score =  106 bits (264), Expect = 4e-21
 Identities = 48/70 (68%), Positives = 58/70 (82%)
 Frame = -2

Query: 622 QGLVLGFLVSAGIIRSHHHWLDVEHIQEAYQNILVCIEMVIFSIIQRYAYSAAPYSGGVK 443
           QG+VL  LV+ GIIRSHH WLDVEHIQEA QN+LVC+EMV+FS++Q+YAY  APYSG ++
Sbjct: 226 QGIVLEILVALGIIRSHHFWLDVEHIQEAIQNVLVCVEMVVFSVLQQYAYHVAPYSGDME 285

Query: 442 PKLKSEKKNE 413
            KLK  KK E
Sbjct: 286 AKLKLSKKRE 295


>ref|XP_002268954.2| PREDICTED: transmembrane protein 184C-like [Vitis vinifera]
          Length = 295

 Score =  104 bits (259), Expect = 1e-20
 Identities = 46/70 (65%), Positives = 58/70 (82%)
 Frame = -2

Query: 622 QGLVLGFLVSAGIIRSHHHWLDVEHIQEAYQNILVCIEMVIFSIIQRYAYSAAPYSGGVK 443
           QG+VL  LV+ G+IRSHH WLDVEHIQEA QN+LVC+EMV+FS++Q+YA+  APYSG ++
Sbjct: 226 QGIVLEILVALGVIRSHHFWLDVEHIQEAIQNVLVCVEMVVFSVLQQYAFHVAPYSGDME 285

Query: 442 PKLKSEKKNE 413
            KLK  KK E
Sbjct: 286 AKLKLSKKRE 295


>emb|CBI23472.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score =  104 bits (259), Expect = 1e-20
 Identities = 46/70 (65%), Positives = 58/70 (82%)
 Frame = -2

Query: 622 QGLVLGFLVSAGIIRSHHHWLDVEHIQEAYQNILVCIEMVIFSIIQRYAYSAAPYSGGVK 443
           QG+VL  LV+ G+IRSHH WLDVEHIQEA QN+LVC+EMV+FS++Q+YA+  APYSG ++
Sbjct: 151 QGIVLEILVALGVIRSHHFWLDVEHIQEAIQNVLVCVEMVVFSVLQQYAFHVAPYSGDME 210

Query: 442 PKLKSEKKNE 413
            KLK  KK E
Sbjct: 211 AKLKLSKKRE 220


>ref|XP_002521429.1| conserved hypothetical protein [Ricinus communis]
           gi|223539328|gb|EEF40919.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 294

 Score =  100 bits (249), Expect = 2e-19
 Identities = 44/67 (65%), Positives = 56/67 (83%)
 Frame = -2

Query: 622 QGLVLGFLVSAGIIRSHHHWLDVEHIQEAYQNILVCIEMVIFSIIQRYAYSAAPYSGGVK 443
           QG+VL  LV+ GIIRSHH WLDVEHI+EA QN+LVC+EMV+FS++Q+YAY  APYSG ++
Sbjct: 226 QGVVLDILVAIGIIRSHHFWLDVEHIEEALQNVLVCLEMVVFSVLQQYAYHVAPYSGDIE 285

Query: 442 PKLKSEK 422
            K+K  K
Sbjct: 286 RKMKLNK 292


>ref|XP_002305664.1| predicted protein [Populus trichocarpa] gi|222848628|gb|EEE86175.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 44/68 (64%), Positives = 58/68 (85%)
 Frame = -2

Query: 622 QGLVLGFLVSAGIIRSHHHWLDVEHIQEAYQNILVCIEMVIFSIIQRYAYSAAPYSGGVK 443
           QG+VL  LVSAGIIRSHH WLDVEHI+EA+QN+LV +EMV+FS++Q+YAY  APYSG V+
Sbjct: 227 QGIVLDMLVSAGIIRSHHFWLDVEHIEEAFQNVLVILEMVVFSVLQQYAYHVAPYSGEVE 286

Query: 442 PKLKSEKK 419
            K+  +++
Sbjct: 287 TKMLKKRE 294


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