BLASTX nr result

ID: Coptis25_contig00013879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013879
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172258.1| PREDICTED: DUF246 domain-containing protein ...    86   3e-15
ref|XP_004133993.1| PREDICTED: DUF246 domain-containing protein ...    86   3e-15
ref|XP_002892251.1| hypothetical protein ARALYDRAFT_470476 [Arab...    83   3e-14
gb|AAF40446.1|AC004809_4 Similar to the auxin-independent growth...    82   3e-14
emb|CBI17217.3| unnamed protein product [Vitis vinifera]               82   3e-14

>ref|XP_004172258.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 523

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 35/49 (71%), Positives = 43/49 (87%)
 Frame = +2

Query: 2   AKRDTPSWRPSSAPRSDWPPPPNETNGYLRVRCNGGLNQQCSAVCICVI 148
           ++ D+  WRPSSAPRSDWPPPP+E+NGYL+VRCNGGLNQQ SA+C  V+
Sbjct: 66  SRADSRGWRPSSAPRSDWPPPPSESNGYLKVRCNGGLNQQRSAICNAVL 114


>ref|XP_004133993.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 523

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 35/49 (71%), Positives = 43/49 (87%)
 Frame = +2

Query: 2   AKRDTPSWRPSSAPRSDWPPPPNETNGYLRVRCNGGLNQQCSAVCICVI 148
           ++ D+  WRPSSAPRSDWPPPP+E+NGYL+VRCNGGLNQQ SA+C  V+
Sbjct: 66  SRADSRGWRPSSAPRSDWPPPPSESNGYLKVRCNGGLNQQRSAICNAVL 114


>ref|XP_002892251.1| hypothetical protein ARALYDRAFT_470476 [Arabidopsis lyrata subsp.
           lyrata] gi|297338093|gb|EFH68510.1| hypothetical protein
           ARALYDRAFT_470476 [Arabidopsis lyrata subsp. lyrata]
          Length = 519

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = +2

Query: 11  DTPSWRPSSAPRSDWPPPPNETNGYLRVRCNGGLNQQCSAVCICVI 148
           ++  WRPSSAPRSDWPPP  ETNGYLRVRCNGGLNQQ SA+C  V+
Sbjct: 67  ESGGWRPSSAPRSDWPPPTKETNGYLRVRCNGGLNQQRSAICNAVL 112


>gb|AAF40446.1|AC004809_4 Similar to the auxin-independent growth promoter (axi 1) gene
           product from Nicotiana tabacum gb|X80301. ESTs
           gb|T88041, gb|AA394631 and gb|AA720157 come from this
           gene [Arabidopsis thaliana]
          Length = 499

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = +2

Query: 23  WRPSSAPRSDWPPPPNETNGYLRVRCNGGLNQQCSAVCICVI 148
           WRPSSAPRSDWPPP  ETNGYLRVRCNGGLNQQ SA+C  V+
Sbjct: 51  WRPSSAPRSDWPPPTKETNGYLRVRCNGGLNQQRSAICNAVL 92


>emb|CBI17217.3| unnamed protein product [Vitis vinifera]
          Length = 564

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = +2

Query: 11  DTPSWRPSSAPRSDWPPPPNETNGYLRVRCNGGLNQQCSAVCICVI 148
           D+  WRPSSAPRSDWP PP+E+NGYLRVRCNGGLNQQ +A+C  V+
Sbjct: 109 DSSGWRPSSAPRSDWPSPPSESNGYLRVRCNGGLNQQRTAICNAVL 154


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