BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013878
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139171.1| PREDICTED: 50S ribosomal protein L27-like [C...    65   7e-09
ref|XP_003598463.1| 50S ribosomal protein L27 [Medicago truncatu...    62   5e-08
ref|XP_002873715.1| ribosomal protein L27 family protein [Arabid...    61   1e-07
emb|CAB89332.1| ribosomal protein L27-like [Arabidopsis thaliana]      60   2e-07
ref|NP_568310.1| large subunit ribosomal protein L27 [Arabidopsi...    60   2e-07

>ref|XP_004139171.1| PREDICTED: 50S ribosomal protein L27-like [Cucumis sativus]
           gi|449482828|ref|XP_004156416.1| PREDICTED: 50S
           ribosomal protein L27-like [Cucumis sativus]
          Length = 148

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = +1

Query: 79  MMNLAASLCRRVNLRELVTNVPVYSGFISDAEGGLSLMIRRWATKK 216
           M+N+A + C+R+N+++LVTNVPVYS F   A  GL+L+ RRWATKK
Sbjct: 1   MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKK 46


>ref|XP_003598463.1| 50S ribosomal protein L27 [Medicago truncatula]
           gi|217071060|gb|ACJ83890.1| unknown [Medicago
           truncatula] gi|355487511|gb|AES68714.1| 50S ribosomal
           protein L27 [Medicago truncatula]
           gi|388495594|gb|AFK35863.1| unknown [Medicago
           truncatula] gi|388500166|gb|AFK38149.1| unknown
           [Medicago truncatula]
          Length = 148

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = +1

Query: 82  MNLAASLCRRVNLRELVTNVPVYSGFISDAEGGLSLMIRRWATKK 216
           MN A+SLCRR+N++ELVTNVPVY      +  GLSL+ RRWATKK
Sbjct: 1   MNFASSLCRRLNIKELVTNVPVYRSTADVSGEGLSLVFRRWATKK 45


>ref|XP_002873715.1| ribosomal protein L27 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297319552|gb|EFH49974.1| ribosomal protein
           L27 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 154

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/49 (63%), Positives = 40/49 (81%), Gaps = 2/49 (4%)
 Frame = +1

Query: 76  SMMNLAASLCRRVNLRELVTNVPVYSG-FISD-AEGGLSLMIRRWATKK 216
           + +N AAS+CRRV+LREL+T VP YSG  ISD +  GLSL+++RWATKK
Sbjct: 2   NFLNSAASICRRVSLRELITEVPAYSGSSISDGSSSGLSLVLKRWATKK 50


>emb|CAB89332.1| ribosomal protein L27-like [Arabidopsis thaliana]
          Length = 162

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/49 (63%), Positives = 39/49 (79%), Gaps = 2/49 (4%)
 Frame = +1

Query: 76  SMMNLAASLCRRVNLRELVTNVPVYSG-FISD-AEGGLSLMIRRWATKK 216
           + +N AAS+CRRV+LREL+T VP YSG  ISD +  GLSL+ +RWATKK
Sbjct: 2   NFLNSAASICRRVSLRELITEVPAYSGSSISDGSSSGLSLVFKRWATKK 50


>ref|NP_568310.1| large subunit ribosomal protein L27 [Arabidopsis thaliana]
           gi|15081777|gb|AAK82543.1| AT5g15220/F8M21_110
           [Arabidopsis thaliana] gi|18958058|gb|AAL79602.1|
           AT5g15220/F8M21_110 [Arabidopsis thaliana]
           gi|332004748|gb|AED92131.1| large subunit ribosomal
           protein L27 [Arabidopsis thaliana]
          Length = 154

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/49 (63%), Positives = 39/49 (79%), Gaps = 2/49 (4%)
 Frame = +1

Query: 76  SMMNLAASLCRRVNLRELVTNVPVYSG-FISD-AEGGLSLMIRRWATKK 216
           + +N AAS+CRRV+LREL+T VP YSG  ISD +  GLSL+ +RWATKK
Sbjct: 2   NFLNSAASICRRVSLRELITEVPAYSGSSISDGSSSGLSLVFKRWATKK 50