BLASTX nr result

ID: Coptis25_contig00013858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013858
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40749.3| unnamed protein product [Vitis vinifera]              304   2e-80
ref|XP_004145556.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   298   1e-78
emb|CAN59776.1| hypothetical protein VITISV_024651 [Vitis vinifera]   296   5e-78
ref|XP_002273060.2| PREDICTED: probable FKBP-type peptidyl-proly...   287   2e-75
ref|XP_002510711.1| FK506 binding protein, putative [Ricinus com...   285   1e-74

>emb|CBI40749.3| unnamed protein product [Vitis vinifera]
          Length = 222

 Score =  304 bits (778), Expect = 2e-80
 Identities = 153/219 (69%), Positives = 180/219 (82%), Gaps = 1/219 (0%)
 Frame = -1

Query: 827 MASVQSFEKLVVD-IFLCSKPTPIQKQNQNQLVLPLPISRRAALLISVLPLNFISPCQPS 651
           MAS++S  +  VD + L    + IQ Q    ++LP+PISRR A+LISVLP + IS    S
Sbjct: 1   MASIRSIHRWDVDNLLLTPTSSAIQTQPPKHVILPMPISRRCAILISVLPFSVISQPHSS 60

Query: 650 LARERRDRRVIPLEDYKTSSDGLKYYDLVEGKGRTAEKGSAVMVHFDCLYRNIDAVSSRE 471
            ARERR ++ IPLEDY TS DGLKYYD+V+G G  AEKGS+V VHFDC+YR+I AVSSRE
Sbjct: 61  DARERRTKKNIPLEDYLTSPDGLKYYDVVDGNGPVAEKGSSVQVHFDCIYRSITAVSSRE 120

Query: 470 SKLLAGNRSIAEPYEFKVGATPGKERKRDFVDNANGLFSAQASPKPPPAMYSVTEGMKVG 291
           SKLLAGNR IA+PY FKVGA PGKERKR+FVDN NGLFSAQA+PKPPPA+YS+TEGMKVG
Sbjct: 121 SKLLAGNRIIAQPYVFKVGAPPGKERKREFVDNPNGLFSAQAAPKPPPALYSITEGMKVG 180

Query: 290 GKRTVIVPPEAGYGRRGMNEIPPGATFQLTVELLEVLSP 174
           GKRTVIVPPEAGYG++GM+EIPPGATF+L VELL+VL P
Sbjct: 181 GKRTVIVPPEAGYGQKGMSEIPPGATFELNVELLQVLPP 219


>ref|XP_004145556.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP18,
           chloroplastic-like [Cucumis sativus]
           gi|449530267|ref|XP_004172117.1| PREDICTED:
           peptidyl-prolyl cis-trans isomerase FKBP18,
           chloroplastic-like [Cucumis sativus]
          Length = 227

 Score =  298 bits (762), Expect = 1e-78
 Identities = 147/195 (75%), Positives = 166/195 (85%)
 Frame = -1

Query: 758 QKQNQNQLVLPLPISRRAALLISVLPLNFISPCQPSLARERRDRRVIPLEDYKTSSDGLK 579
           Q++N +Q    LPISRR+A+LIS LP   +S   PS ARERR+++ IPLEDY TS +GLK
Sbjct: 29  QRENASQQEFSLPISRRSAILISSLPFTLVS-VSPSKARERRNKKTIPLEDYLTSPNGLK 87

Query: 578 YYDLVEGKGRTAEKGSAVMVHFDCLYRNIDAVSSRESKLLAGNRSIAEPYEFKVGATPGK 399
           YYD+ EGKG  AEKGS V VHFDCLYR I AVSSRESKLLAGNR IA+PYEFKVGA PGK
Sbjct: 88  YYDVEEGKGPVAEKGSTVQVHFDCLYRGITAVSSRESKLLAGNRVIAQPYEFKVGAPPGK 147

Query: 398 ERKRDFVDNANGLFSAQASPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYGRRGMNEIPPG 219
           ERKRDFVDN NGLFSAQA+PKPPPAMYS+TEGMKVGGKR VIVPPEAGYG++GMNEIPPG
Sbjct: 148 ERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVGGKRRVIVPPEAGYGQKGMNEIPPG 207

Query: 218 ATFQLTVELLEVLSP 174
           ATF+L +ELLEV+ P
Sbjct: 208 ATFELNIELLEVVQP 222


>emb|CAN59776.1| hypothetical protein VITISV_024651 [Vitis vinifera]
          Length = 682

 Score =  296 bits (757), Expect = 5e-78
 Identities = 148/216 (68%), Positives = 176/216 (81%), Gaps = 1/216 (0%)
 Frame = -1

Query: 827 MASVQSFEKLVVD-IFLCSKPTPIQKQNQNQLVLPLPISRRAALLISVLPLNFISPCQPS 651
           MAS++   +  VD + L    + IQ Q    ++LP+PI RR A+LISVLP + IS    S
Sbjct: 1   MASIRXIHRWDVDNLLLTPTSSAIQTQPPKHVILPMPIXRRCAILISVLPFSLISQPHSS 60

Query: 650 LARERRDRRVIPLEDYKTSSDGLKYYDLVEGKGRTAEKGSAVMVHFDCLYRNIDAVSSRE 471
            ARERR ++ IPLEDY TS DGLKYYD+V+G G  AEKGS+V VHFDC+YR+I AVSSRE
Sbjct: 61  DARERRTKKNIPLEDYLTSPDGLKYYDVVBGNGPVAEKGSSVQVHFDCIYRSITAVSSRE 120

Query: 470 SKLLAGNRSIAEPYEFKVGATPGKERKRDFVDNANGLFSAQASPKPPPAMYSVTEGMKVG 291
           SK+LAGNR IA+PY FKVGA PGKERKR+FVDN NGLFSAQA+PKPPPA+YS+TEGMKVG
Sbjct: 121 SKJLAGNRIIAQPYVFKVGAPPGKERKREFVDNPNGLFSAQAAPKPPPALYSITEGMKVG 180

Query: 290 GKRTVIVPPEAGYGRRGMNEIPPGATFQLTVELLEV 183
           GKRTVIVPPEAGYG++GM+EIPPGATF+L VELL+V
Sbjct: 181 GKRTVIVPPEAGYGQKGMSEIPPGATFELNVELLQV 216


>ref|XP_002273060.2| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase
           1, chloroplastic [Vitis vinifera]
          Length = 187

 Score =  287 bits (735), Expect = 2e-75
 Identities = 141/184 (76%), Positives = 161/184 (87%)
 Frame = -1

Query: 725 LPISRRAALLISVLPLNFISPCQPSLARERRDRRVIPLEDYKTSSDGLKYYDLVEGKGRT 546
           +PISRR A+LISVLP + IS    S ARERR ++ IPLEDY TS DGLKYYD+V+G G  
Sbjct: 1   MPISRRCAILISVLPFSVISQPHSSDARERRTKKNIPLEDYLTSPDGLKYYDVVDGNGPV 60

Query: 545 AEKGSAVMVHFDCLYRNIDAVSSRESKLLAGNRSIAEPYEFKVGATPGKERKRDFVDNAN 366
           AEKGS+V VHFDC+YR+I AVSSRESKLLAGNR IA+PY FKVGA PGKERKR+FVDN N
Sbjct: 61  AEKGSSVQVHFDCIYRSITAVSSRESKLLAGNRIIAQPYVFKVGAPPGKERKREFVDNPN 120

Query: 365 GLFSAQASPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYGRRGMNEIPPGATFQLTVELLE 186
           GLFSAQA+PKPPPA+YS+TEGMKVGGKRTVIVPPEAGYG++GM+EIPPGATF+L VELL+
Sbjct: 121 GLFSAQAAPKPPPALYSITEGMKVGGKRTVIVPPEAGYGQKGMSEIPPGATFELNVELLQ 180

Query: 185 VLSP 174
           VL P
Sbjct: 181 VLPP 184


>ref|XP_002510711.1| FK506 binding protein, putative [Ricinus communis]
           gi|223551412|gb|EEF52898.1| FK506 binding protein,
           putative [Ricinus communis]
          Length = 219

 Score =  285 bits (728), Expect = 1e-74
 Identities = 145/202 (71%), Positives = 166/202 (82%), Gaps = 3/202 (1%)
 Frame = -1

Query: 761 IQKQNQN---QLVLPLPISRRAALLISVLPLNFISPCQPSLARERRDRRVIPLEDYKTSS 591
           I KQ+Q    Q+V+  P SRR A+L S L L+ IS  Q +  RERR+++ IPLEDY TS 
Sbjct: 18  ISKQSQEPPKQVVVSTPTSRRCAVLTSSLSLSLISFPQLAEGRERRNKKNIPLEDYLTSP 77

Query: 590 DGLKYYDLVEGKGRTAEKGSAVMVHFDCLYRNIDAVSSRESKLLAGNRSIAEPYEFKVGA 411
           DGLKYYD+VEGKG  AEKGS V VHFDC+YR I AVSSRESKLLAGNR IA+PYEFKVGA
Sbjct: 78  DGLKYYDVVEGKGPIAEKGSTVQVHFDCMYRGITAVSSRESKLLAGNRIIAQPYEFKVGA 137

Query: 410 TPGKERKRDFVDNANGLFSAQASPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYGRRGMNE 231
            PGKERKRDFVDN NGLFSAQA+PKPP AMY++T+GMK+GGKR VIVPPEAGYG++GMNE
Sbjct: 138 PPGKERKRDFVDNPNGLFSAQAAPKPPAAMYTITQGMKLGGKRIVIVPPEAGYGKKGMNE 197

Query: 230 IPPGATFQLTVELLEVLSP*TK 165
           IPPGATFQL +ELL+V SP  K
Sbjct: 198 IPPGATFQLDIELLQVTSPEVK 219


Top