BLASTX nr result

ID: Coptis25_contig00013854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013854
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276751.1| PREDICTED: eukaryotic translation initiation...    69   7e-11
emb|CBI25434.3| unnamed protein product [Vitis vinifera]               69   7e-11
ref|XP_002275312.1| PREDICTED: eukaryotic translation initiation...    69   1e-10
ref|XP_003538479.1| PREDICTED: eukaryotic translation initiation...    68   1e-10
gb|ACU23758.1| unknown [Glycine max]                                   68   1e-10

>ref|XP_002276751.1| PREDICTED: eukaryotic translation initiation factor 2 subunit alpha
           [Vitis vinifera]
          Length = 344

 Score = 69.3 bits (168), Expect(2) = 7e-11
 Identities = 49/117 (41%), Positives = 56/117 (47%)
 Frame = +1

Query: 34  DEIKDALLINIRRRMTL*PLKIQADIEMKCFQMDGVLHIKVMISYCXXXXXXXXXXXXXX 213
           +E+KDAL+ NIRRRMT  PLKI+ADIEMKCFQ DGVLHIK  +                 
Sbjct: 186 EEVKDALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAM----------RKAEAAG 235

Query: 214 XXXCPNLSCCSTYYVHSSPFYRLPCGKLKLLEMRIFLLR*NWWLPPLYALTTQTLDK 384
              CP                     K+KL+             PPLY LTTQTLDK
Sbjct: 236 NKDCP--------------------VKIKLV------------APPLYVLTTQTLDK 260



 Score = 22.3 bits (46), Expect(2) = 7e-11
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 2   EIKEVGQDGKEM 37
           E+KEVG DG+E+
Sbjct: 166 EVKEVGPDGQEV 177


>emb|CBI25434.3| unnamed protein product [Vitis vinifera]
          Length = 229

 Score = 69.3 bits (168), Expect(2) = 7e-11
 Identities = 49/117 (41%), Positives = 56/117 (47%)
 Frame = +1

Query: 34  DEIKDALLINIRRRMTL*PLKIQADIEMKCFQMDGVLHIKVMISYCXXXXXXXXXXXXXX 213
           +E+KDAL+ NIRRRMT  PLKI+ADIEMKCFQ DGVLHIK  +                 
Sbjct: 71  EEVKDALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAM----------RKAEAAG 120

Query: 214 XXXCPNLSCCSTYYVHSSPFYRLPCGKLKLLEMRIFLLR*NWWLPPLYALTTQTLDK 384
              CP                     K+KL+             PPLY LTTQTLDK
Sbjct: 121 NKDCP--------------------VKIKLV------------APPLYVLTTQTLDK 145



 Score = 22.3 bits (46), Expect(2) = 7e-11
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 2  EIKEVGQDGKEM 37
          E+KEVG DG+E+
Sbjct: 51 EVKEVGPDGQEV 62


>ref|XP_002275312.1| PREDICTED: eukaryotic translation initiation factor 2 subunit alpha
           [Vitis vinifera] gi|297745848|emb|CBI15904.3| unnamed
           protein product [Vitis vinifera]
          Length = 344

 Score = 68.6 bits (166), Expect(2) = 1e-10
 Identities = 48/117 (41%), Positives = 56/117 (47%)
 Frame = +1

Query: 34  DEIKDALLINIRRRMTL*PLKIQADIEMKCFQMDGVLHIKVMISYCXXXXXXXXXXXXXX 213
           +E+KD+L+ NIRRRMT  PLKI+ADIEMKCFQ DGVLHIK  +                 
Sbjct: 186 EEVKDSLIKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAM----------RKAEAAG 235

Query: 214 XXXCPNLSCCSTYYVHSSPFYRLPCGKLKLLEMRIFLLR*NWWLPPLYALTTQTLDK 384
              CP                     K+KL+             PPLY LTTQTLDK
Sbjct: 236 NKDCP--------------------VKIKLV------------APPLYVLTTQTLDK 260



 Score = 22.3 bits (46), Expect(2) = 1e-10
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 2   EIKEVGQDGKEM 37
           EIKE+G DG+E+
Sbjct: 166 EIKEIGPDGQEV 177


>ref|XP_003538479.1| PREDICTED: eukaryotic translation initiation factor 2 subunit
           alpha-like [Glycine max]
          Length = 340

 Score = 68.2 bits (165), Expect(2) = 1e-10
 Identities = 48/117 (41%), Positives = 56/117 (47%)
 Frame = +1

Query: 34  DEIKDALLINIRRRMTL*PLKIQADIEMKCFQMDGVLHIKVMISYCXXXXXXXXXXXXXX 213
           +E+KD+L+ NIRRRMT  PLKI+ADIEMKCFQ DGVLHIK  +                 
Sbjct: 183 EEVKDSLVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAM----------HKAEAAG 232

Query: 214 XXXCPNLSCCSTYYVHSSPFYRLPCGKLKLLEMRIFLLR*NWWLPPLYALTTQTLDK 384
              CP                     K+KL+             PPLY LTTQTLDK
Sbjct: 233 NDDCP--------------------VKIKLV------------APPLYVLTTQTLDK 257



 Score = 22.3 bits (46), Expect(2) = 1e-10
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 2   EIKEVGQDGKEM 37
           E+KEVG DG+E+
Sbjct: 163 EVKEVGPDGQEV 174


>gb|ACU23758.1| unknown [Glycine max]
          Length = 340

 Score = 68.2 bits (165), Expect(2) = 1e-10
 Identities = 48/117 (41%), Positives = 56/117 (47%)
 Frame = +1

Query: 34  DEIKDALLINIRRRMTL*PLKIQADIEMKCFQMDGVLHIKVMISYCXXXXXXXXXXXXXX 213
           +E+KD+L+ NIRRRMT  PLKI+ADIEMKCFQ DGVLHIK  +                 
Sbjct: 183 EEVKDSLVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAM----------HKAEAAG 232

Query: 214 XXXCPNLSCCSTYYVHSSPFYRLPCGKLKLLEMRIFLLR*NWWLPPLYALTTQTLDK 384
              CP                     K+KL+             PPLY LTTQTLDK
Sbjct: 233 NDDCP--------------------VKIKLV------------APPLYVLTTQTLDK 257



 Score = 22.3 bits (46), Expect(2) = 1e-10
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 2   EIKEVGQDGKEM 37
           E+KEVG DG+E+
Sbjct: 163 EVKEVGPDGQEV 174


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