BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013850
         (1709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24253.3| unnamed protein product [Vitis vinifera]              500   e-139
ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containi...   500   e-139
ref|XP_002313262.1| predicted protein [Populus trichocarpa] gi|2...   459   e-126
ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containi...   429   e-117
ref|XP_003623229.1| Pentatricopeptide repeat-containing protein ...   427   e-117

>emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  500 bits (1288), Expect = e-139
 Identities = 246/461 (53%), Positives = 327/461 (70%)
 Frame = -3

Query: 1704 VDRGKEFFHKMLDRGMLPNVVTYSCLVRGLCKAGNYQEANNLLKDMVGRGIRPDTVTYTG 1525
            +DRGKE F +ML +G+  NVVTYSCLV GLC+ G ++EAN +L  M   GI PD VTYTG
Sbjct: 119  LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 178

Query: 1524 LIDVLFKGGKFKYAMDFLQWIIDNGEKPSTTTYNVLINGLCKEGLVSDAFKFFNKMAERG 1345
            LID L K G+  +AMD L  +++ GE+PS  TYNVL++GLCKEGLV DAFK    M E+G
Sbjct: 179  LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238

Query: 1344 TPPDVVTFNTLMRGLCHTQQVDDAVVLINKMIEGEYNGEPNTKTYNTLIQGLCSEGRLDE 1165
               DVVT+NTLM+GLC   +VD+A+ L N M + E   EPN  T+N LI GLC EGRL +
Sbjct: 239  KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298

Query: 1164 AMSFYQKMVQKGNLCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMIN 985
            A+  ++KMV+KG+  N+VTYN+L+GG LKA  + +A ELW+  L  G +PN+FTYSI+I+
Sbjct: 299  AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 358

Query: 984  GLCKMNMLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKP 805
            G CKM ML+ AK + CEM+T G  P  + YN  + SLCK+G+LEQA +L  EM +ANC+P
Sbjct: 359  GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 418

Query: 804  DVVSFNILINGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFF 625
            D++SFN +I+G L  G+ Q  KEL   MV+ GL PD +T+ST+I+R SK+G+L+EA +  
Sbjct: 419  DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 478

Query: 624  NYMIARGFAPDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRD 445
              M+A GF PDA+V DSL+KG  ++G   E+I+LLHQMAAKG VLD  IVSTIL CLC  
Sbjct: 479  ERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 538

Query: 444  GESPEFLKLLPTFSSEASKETGISCSELLRKLEDSYSGLEV 322
             +  + ++LLPTF    S+   ISC+ELL +L  S+  L++
Sbjct: 539  IQEVDVMELLPTFFQGTSEGASISCNELLMQLHQSHPKLQL 579



 Score =  201 bits (511), Expect = 5e-49
 Identities = 121/398 (30%), Positives = 207/398 (52%), Gaps = 2/398 (0%)
 Frame = -3

Query: 1629 LVRGLCKAGNYQEANNLLKDMVGRGIRPDTVTYTGLIDVLFKGGKFKYAMDFLQWIIDNG 1450
            +++GLC+ G   EA  L+++M  + + PD V+Y  LI+ L K  K K A+  L  +   G
Sbjct: 4    VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 1449 EKPSTTTYNVLINGLCKEGLVSDAFKFFNKMAERGTPPDVVTFNTLMRGLCHTQQVDDAV 1270
              P++ T   L++GLCK+G + +A +    M ++G   DVV + TL+ G C+   +D   
Sbjct: 64   CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123

Query: 1269 VLINKMIEGEYNGEPNTKTYNTLIQGLCSEGRLDEAMSFYQKMVQKGNLCNVVTYNLLIG 1090
             L ++M+    +   N  TY+ L+ GLC  G+  EA +    M + G   +VVTY  LI 
Sbjct: 124  ELFDEMLGKGISA--NVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 1089 GFLKARNVSKARELWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVLCEMKTSGHTP 910
            G  K    + A +L    +  G  P+  TY+++++GLCK  ++  A ++L  M   G   
Sbjct: 182  GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 909  TAYVYNPFLESLCKDGNLEQAMNLLGEMKD-ANC-KPDVVSFNILINGMLNDGNLQTAKE 736
                YN  ++ LC  G +++A+ L   M D  NC +P+V +FN+LI G+  +G L  A +
Sbjct: 242  DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 735  LLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAVVCDSLIKGFG 556
            +   MV+ G   +++TY+ ++    K G++ EAM  +  ++  GF P++     LI GF 
Sbjct: 302  IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 361

Query: 555  ARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDG 442
                      L  +M   G+   +   +T++  LC++G
Sbjct: 362  KMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 399



 Score =  195 bits (496), Expect = 3e-47
 Identities = 108/339 (31%), Positives = 184/339 (54%), Gaps = 3/339 (0%)
 Frame = -3

Query: 1425 NVLINGLCKEGLVSDAFKFFNKMAERGTPPDVVTFNTLMRGLCHTQQVDDAVVLINKMIE 1246
            N+++ GLC+ G V +A     +M  +   PD+V++NTL+ GLC  +++ +AV L+   +E
Sbjct: 2    NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLL---LE 58

Query: 1245 GEYNG-EPNTKTYNTLIQGLCSEGRLDEAMSFYQKMVQKGNLCNVVTYNLLIGGFLKARN 1069
             E  G  PN+ T  TL+ GLC +GR+DEAM   + M +KG   +VV Y  LI GF    N
Sbjct: 59   MEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGN 118

Query: 1068 VSKARELWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVLCEMKTSGHTPTAYVYNP 889
            + + +EL+ + L  G+  N  TYS +++GLC++     A  VL  M   G  P    Y  
Sbjct: 119  LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 178

Query: 888  FLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLNDGNLQTAKELLEDMVQSG 709
             ++ LCKDG    AM+LL  M +   +P  V++N+L++G+  +G +  A ++L  M++ G
Sbjct: 179  LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238

Query: 708  LNPDIITYSTIIDRYSKIGQLNEAMTFFNYMI--ARGFAPDAVVCDSLIKGFGARGQRKE 535
               D++TY+T++      G+++EA+  FN M        P+    + LI G    G+  +
Sbjct: 239  KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298

Query: 534  VIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPEFLKL 418
             + +  +M  KG   ++   + +L    + G+  E ++L
Sbjct: 299  AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMEL 337



 Score =  157 bits (397), Expect = 8e-36
 Identities = 89/285 (31%), Positives = 146/285 (51%), Gaps = 1/285 (0%)
 Frame = -3

Query: 1209 NTLIQGLCSEGRLDEAMSFYQKMVQKGNLCNVVTYNLLIGGFLKARNVSKARELWQDTLV 1030
            N +++GLC  G + EAM   ++M +K    ++V+YN LI G  KA+ + +A  L  +   
Sbjct: 2    NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 1029 AGVMPNAFTYSIMINGLCKMNMLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQ 850
            AG  PN+ T + +++GLCK   +D A E+L  MK  G      +Y   +   C +GNL++
Sbjct: 62   AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 849  AMNLLGEMKDANCKPDVVSFNILINGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIID 670
               L  EM       +VV+++ L++G+   G  + A  +L  M + G++PD++TY+ +ID
Sbjct: 122  GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 669  RYSKIGQLNEAMTFFNYMIARGFAPDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVL 490
               K G+   AM   N M+ +G  P  V  + L+ G    G   +   +L  M  KG   
Sbjct: 182  GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 489  DVNIVSTILDCLCRDGESPEFLKLLPT-FSSEASKETGISCSELL 358
            DV   +T++  LC  G+  E LKL  + F +E   E  +    +L
Sbjct: 242  DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 286



 Score =  143 bits (361), Expect = 1e-31
 Identities = 81/254 (31%), Positives = 131/254 (51%)
 Frame = -3

Query: 1104 NLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVLCEMKT 925
            N+++ G  +   V +A  L ++     V P+  +Y+ +INGLCK   L  A  +L EM+ 
Sbjct: 2    NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 924  SGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLNDGNLQT 745
            +G  P +      ++ LCKDG +++AM LL  MK      DVV +  LI+G  N+GNL  
Sbjct: 62   AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 744  AKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAVVCDSLIK 565
             KEL ++M+  G++ +++TYS ++    ++GQ  EA T  N M   G  PD V    LI 
Sbjct: 122  GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 564  GFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPEFLKLLPTFSSEASKE 385
            G    G+    +DLL+ M  KG        + +L  LC++G   +  K+L     +  K 
Sbjct: 182  GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 384  TGISCSELLRKLED 343
              ++ + L++ L D
Sbjct: 242  DVVTYNTLMKGLCD 255


>ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g28010-like
            [Vitis vinifera]
          Length = 728

 Score =  500 bits (1288), Expect = e-139
 Identities = 246/461 (53%), Positives = 327/461 (70%)
 Frame = -3

Query: 1704 VDRGKEFFHKMLDRGMLPNVVTYSCLVRGLCKAGNYQEANNLLKDMVGRGIRPDTVTYTG 1525
            +DRGKE F +ML +G+  NVVTYSCLV GLC+ G ++EAN +L  M   GI PD VTYTG
Sbjct: 265  LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 324

Query: 1524 LIDVLFKGGKFKYAMDFLQWIIDNGEKPSTTTYNVLINGLCKEGLVSDAFKFFNKMAERG 1345
            LID L K G+  +AMD L  +++ GE+PS  TYNVL++GLCKEGLV DAFK    M E+G
Sbjct: 325  LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 384

Query: 1344 TPPDVVTFNTLMRGLCHTQQVDDAVVLINKMIEGEYNGEPNTKTYNTLIQGLCSEGRLDE 1165
               DVVT+NTLM+GLC   +VD+A+ L N M + E   EPN  T+N LI GLC EGRL +
Sbjct: 385  KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 444

Query: 1164 AMSFYQKMVQKGNLCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMIN 985
            A+  ++KMV+KG+  N+VTYN+L+GG LKA  + +A ELW+  L  G +PN+FTYSI+I+
Sbjct: 445  AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 504

Query: 984  GLCKMNMLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKP 805
            G CKM ML+ AK + CEM+T G  P  + YN  + SLCK+G+LEQA +L  EM +ANC+P
Sbjct: 505  GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEP 564

Query: 804  DVVSFNILINGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFF 625
            D++SFN +I+G L  G+ Q  KEL   MV+ GL PD +T+ST+I+R SK+G+L+EA +  
Sbjct: 565  DIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 624

Query: 624  NYMIARGFAPDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRD 445
              M+A GF PDA+V DSL+KG  ++G   E+I+LLHQMAAKG VLD  IVSTIL CLC  
Sbjct: 625  ERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 684

Query: 444  GESPEFLKLLPTFSSEASKETGISCSELLRKLEDSYSGLEV 322
             +  + ++LLPTF    S+   ISC+ELL +L  S+  L++
Sbjct: 685  IQEVDVMELLPTFFQGTSEGASISCNELLMQLHQSHPKLQL 725



 Score =  218 bits (554), Expect = 5e-54
 Identities = 127/425 (29%), Positives = 220/425 (51%), Gaps = 3/425 (0%)
 Frame = -3

Query: 1683 FHKMLDRGMLPNVVTYSCLVRGLCKAGNYQEANNLLKDMVGRGIRPDTVTYTGLIDVLFK 1504
            FH  LD  +LP+  T + LV  L ++ NY  A ++ + M    + P   + + LI+    
Sbjct: 62   FHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFAD 121

Query: 1503 GGKFKYAMDFLQWIIDNGEKPSTTTYNVLINGLCKEGLVSDAFKFFNKMAERGTPPDVVT 1324
              K +     +  ++  G   +    N+++ GLC+ G V +A     +M  +   PD+V+
Sbjct: 122  AQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVS 181

Query: 1323 FNTLMRGLCHTQQVDDAVVLINKMIEGEYNG-EPNTKTYNTLIQGLCSEGRLDEAMSFYQ 1147
            +NTL+ GLC  +++ +AV L   ++E E  G  PN+ T  TL+ GLC +GR+DEAM   +
Sbjct: 182  YNTLINGLCKAKKLKEAVGL---LLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLE 238

Query: 1146 KMVQKGNLCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMINGLCKMN 967
             M +KG   +VV Y  LI GF    N+ + +EL+ + L  G+  N  TYS +++GLC++ 
Sbjct: 239  AMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLG 298

Query: 966  MLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFN 787
                A  VL  M   G  P    Y   ++ LCKDG    AM+LL  M +   +P  V++N
Sbjct: 299  QWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYN 358

Query: 786  ILINGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFFNYMI-- 613
            +L++G+  +G +  A ++L  M++ G   D++TY+T++      G+++EA+  FN M   
Sbjct: 359  VLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDN 418

Query: 612  ARGFAPDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESP 433
                 P+    + LI G    G+  + + +  +M  KG   ++   + +L    + G+  
Sbjct: 419  ENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIK 478

Query: 432  EFLKL 418
            E ++L
Sbjct: 479  EAMEL 483



 Score =  208 bits (530), Expect = 3e-51
 Identities = 126/413 (30%), Positives = 214/413 (51%), Gaps = 2/413 (0%)
 Frame = -3

Query: 1674 MLDRGMLPNVVTYSCLVRGLCKAGNYQEANNLLKDMVGRGIRPDTVTYTGLIDVLFKGGK 1495
            +L RG   NV   + +++GLC+ G   EA  L+++M  + + PD V+Y  LI+ L K  K
Sbjct: 135  VLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKK 194

Query: 1494 FKYAMDFLQWIIDNGEKPSTTTYNVLINGLCKEGLVSDAFKFFNKMAERGTPPDVVTFNT 1315
             K A+  L  +   G  P++ T   L++GLCK+G + +A +    M ++G   DVV + T
Sbjct: 195  LKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGT 254

Query: 1314 LMRGLCHTQQVDDAVVLINKMIEGEYNGEPNTKTYNTLIQGLCSEGRLDEAMSFYQKMVQ 1135
            L+ G C+   +D    L ++M+    +   N  TY+ L+ GLC  G+  EA +    M +
Sbjct: 255  LISGFCNNGNLDRGKELFDEMLGKGISA--NVVTYSCLVHGLCRLGQWKEANTVLNAMAE 312

Query: 1134 KGNLCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMINGLCKMNMLDS 955
             G   +VVTY  LI G  K    + A +L    +  G  P+  TY+++++GLCK  ++  
Sbjct: 313  HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVID 372

Query: 954  AKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKD-ANC-KPDVVSFNIL 781
            A ++L  M   G       YN  ++ LC  G +++A+ L   M D  NC +P+V +FN+L
Sbjct: 373  AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNML 432

Query: 780  INGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFFNYMIARGF 601
            I G+  +G L  A ++   MV+ G   +++TY+ ++    K G++ EAM  +  ++  GF
Sbjct: 433  IGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGF 492

Query: 600  APDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDG 442
             P++     LI GF           L  +M   G+   +   +T++  LC++G
Sbjct: 493  VPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 545



 Score =  169 bits (428), Expect = 2e-39
 Identities = 105/381 (27%), Positives = 180/381 (47%), Gaps = 1/381 (0%)
 Frame = -3

Query: 1497 KFKYAMDFLQWIIDNGEKPSTTTYNVLINGLCKEGLVSDAFKFFNKMAERGTPPDVVTFN 1318
            +F  A+      +D    PS  T N L++ L +      AF  + +M      P   + +
Sbjct: 54   QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLS 113

Query: 1317 TLMRGLCHTQQVDDAVVLINKMIEGEYNGEPNTKTYNTLIQGLCSEGRLDEAMSFYQKMV 1138
             L+      Q+      ++  +++  +    N    N +++GLC  G + EAM   ++M 
Sbjct: 114  ALIECFADAQKPQLGFGVVGLVLKRGFT--VNVFIMNIVLKGLCRNGGVFEAMGLIREMG 171

Query: 1137 QKGNLCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMINGLCKMNMLD 958
            +K    ++V+YN LI G  KA+ + +A  L  +   AG  PN+ T + +++GLCK   +D
Sbjct: 172  RKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMD 231

Query: 957  SAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILI 778
             A E+L  MK  G      +Y   +   C +GNL++   L  EM       +VV+++ L+
Sbjct: 232  EAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLV 291

Query: 777  NGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFFNYMIARGFA 598
            +G+   G  + A  +L  M + G++PD++TY+ +ID   K G+   AM   N M+ +G  
Sbjct: 292  HGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEE 351

Query: 597  PDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPEFLKL 418
            P  V  + L+ G    G   +   +L  M  KG   DV   +T++  LC  G+  E LKL
Sbjct: 352  PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 411

Query: 417  LPT-FSSEASKETGISCSELL 358
              + F +E   E  +    +L
Sbjct: 412  FNSMFDNENCLEPNVFTFNML 432



 Score =  152 bits (383), Expect = 3e-34
 Identities = 98/360 (27%), Positives = 170/360 (47%), Gaps = 2/360 (0%)
 Frame = -3

Query: 1416 INGLCKE--GLVSDAFKFFNKMAERGTPPDVVTFNTLMRGLCHTQQVDDAVVLINKMIEG 1243
            +  LC++     ++A   F+   +    P   T N L+  L  ++    A  +  +M   
Sbjct: 44   LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 1242 EYNGEPNTKTYNTLIQGLCSEGRLDEAMSFYQKMVQKGNLCNVVTYNLLIGGFLKARNVS 1063
            +    P+  + + LI+      +          ++++G   NV   N+++ G  +   V 
Sbjct: 104  DVL--PSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVF 161

Query: 1062 KARELWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVLCEMKTSGHTPTAYVYNPFL 883
            +A  L ++     V P+  +Y+ +INGLCK   L  A  +L EM+ +G  P +      +
Sbjct: 162  EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLM 221

Query: 882  ESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLNDGNLQTAKELLEDMVQSGLN 703
            + LCKDG +++AM LL  MK      DVV +  LI+G  N+GNL   KEL ++M+  G++
Sbjct: 222  DGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGIS 281

Query: 702  PDIITYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAVVCDSLIKGFGARGQRKEVIDL 523
             +++TYS ++    ++GQ  EA T  N M   G  PD V    LI G    G+    +DL
Sbjct: 282  ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 341

Query: 522  LHQMAAKGVVLDVNIVSTILDCLCRDGESPEFLKLLPTFSSEASKETGISCSELLRKLED 343
            L+ M  KG        + +L  LC++G   +  K+L     +  K   ++ + L++ L D
Sbjct: 342  LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 401


>ref|XP_002313262.1| predicted protein [Populus trichocarpa] gi|222849670|gb|EEE87217.1|
            predicted protein [Populus trichocarpa]
          Length = 559

 Score =  459 bits (1180), Expect = e-126
 Identities = 228/464 (49%), Positives = 319/464 (68%)
 Frame = -3

Query: 1704 VDRGKEFFHKMLDRGMLPNVVTYSCLVRGLCKAGNYQEANNLLKDMVGRGIRPDTVTYTG 1525
            +DRGK  F +ML++G+ PNVV YSCL+ G CK G ++EA  +L  M  RGI+PD  TYT 
Sbjct: 96   LDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTC 155

Query: 1524 LIDVLFKGGKFKYAMDFLQWIIDNGEKPSTTTYNVLINGLCKEGLVSDAFKFFNKMAERG 1345
            +I  L K G+ + A+D    + + GE+PST TYNVLINGLCKEG + DAFK F  M E+G
Sbjct: 156  MIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKG 215

Query: 1344 TPPDVVTFNTLMRGLCHTQQVDDAVVLINKMIEGEYNGEPNTKTYNTLIQGLCSEGRLDE 1165
               +VV++NTL+ GLC+  ++D+A+ L + ++E     EP+  T+NT+IQGLC EGRLD+
Sbjct: 216  KRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDK 275

Query: 1164 AMSFYQKMVQKGNLCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMIN 985
            A+  Y  M+++G+  N+ T ++LIG ++K+  + KA ELW+     G++P++ TYS+MI+
Sbjct: 276  AVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMID 335

Query: 984  GLCKMNMLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKP 805
            G CKM+ML+ AK +   MK SG +PT + YN  + SLCK+ +LEQA  L  EMK++NC+P
Sbjct: 336  GFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEP 395

Query: 804  DVVSFNILINGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFF 625
            D +SFNI+I+G L  G++ +AKELL DM Q GL PD  TYS+ I+R SK+GQ+ EA   F
Sbjct: 396  DTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAF 455

Query: 624  NYMIARGFAPDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRD 445
            + MIA G  PD  V DSLIKGFG   + +EVI+LL QMA  GV+LD+ I ++IL  LC  
Sbjct: 456  DSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNS 515

Query: 444  GESPEFLKLLPTFSSEASKETGISCSELLRKLEDSYSGLEVMAA 313
             E    ++LLP FSSE+S  T ISC +LL K++     L++ AA
Sbjct: 516  AEHLHVMELLPNFSSESSGGTSISCDKLLMKIQKFNPKLQISAA 559



 Score =  181 bits (459), Expect = 5e-43
 Identities = 96/282 (34%), Positives = 162/282 (57%), Gaps = 2/282 (0%)
 Frame = -3

Query: 1338 PDVVTFNTLMRGLCHTQQVDDAVVLINKMIEGEYNGEPNTKTYNTLIQGLCSEGRLDEAM 1159
            PD+V++NT++ GLC  ++++ AV L+ +M EG  + EPN+ TY  L+ GLC EGR++EAM
Sbjct: 8    PDIVSYNTIINGLCKEKRLEKAVDLLVEM-EGS-SCEPNSFTYCILMDGLCKEGRVEEAM 65

Query: 1158 SFYQKMVQKGNLCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMINGL 979
                +M +KG   +VV Y+ LI GF     + + + L+ + L  G+ PN   YS +ING 
Sbjct: 66   RLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGF 125

Query: 978  CKMNMLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDV 799
            CK  +   A  VL  M   G  P  Y Y   +  LCKDG   +A++L   M +   +P  
Sbjct: 126  CKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPST 185

Query: 798  VSFNILINGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFFNY 619
            V++N+LING+  +G +  A ++ E M++ G   ++++Y+T+I      G+L+EAM  F+ 
Sbjct: 186  VTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSS 245

Query: 618  MIARG--FAPDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKG 499
            ++  G    PD +  +++I+G    G+  + +++   M  +G
Sbjct: 246  LLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERG 287



 Score =  136 bits (343), Expect = 1e-29
 Identities = 70/225 (31%), Positives = 123/225 (54%)
 Frame = -3

Query: 1023 VMPNAFTYSIMINGLCKMNMLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAM 844
            ++P+  +Y+ +INGLCK   L+ A ++L EM+ S   P ++ Y   ++ LCK+G +E+AM
Sbjct: 6    ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAM 65

Query: 843  NLLGEMKDANCKPDVVSFNILINGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRY 664
             LLGEMK    + DVV ++ LI+G  + G L   K L ++M++ G++P+++ YS +I+ +
Sbjct: 66   RLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGF 125

Query: 663  SKIGQLNEAMTFFNYMIARGFAPDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDV 484
             K G   EA    + M  RG  PD      +I G    G+ ++ +DL   M  KG     
Sbjct: 126  CKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPST 185

Query: 483  NIVSTILDCLCRDGESPEFLKLLPTFSSEASKETGISCSELLRKL 349
               + +++ LC++G   +  K+  T   +  +   +S + L+  L
Sbjct: 186  VTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGL 230



 Score =  134 bits (338), Expect = 6e-29
 Identities = 75/245 (30%), Positives = 124/245 (50%)
 Frame = -3

Query: 1125 LCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKE 946
            L ++V+YN +I G  K + + KA +L  +   +   PN+FTY I+++GLCK   ++ A  
Sbjct: 7    LPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMR 66

Query: 945  VLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGML 766
            +L EMK  G      VY+  +   C  G L++   L  EM +    P+VV ++ LING  
Sbjct: 67   LLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFC 126

Query: 765  NDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAV 586
              G  + A  +L  M + G+ PD+ TY+ +I    K G+  +A+  F+ M  +G  P  V
Sbjct: 127  KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186

Query: 585  VCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPEFLKLLPTF 406
              + LI G    G   +   +   M  KG  L+V   +T++  LC +G+  E +KL  + 
Sbjct: 187  TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246

Query: 405  SSEAS 391
              + +
Sbjct: 247  LEDGN 251



 Score =  119 bits (298), Expect = 2e-24
 Identities = 65/221 (29%), Positives = 117/221 (52%)
 Frame = -3

Query: 933 MKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLNDGN 754
           MK     P    YN  +  LCK+  LE+A++LL EM+ ++C+P+  ++ IL++G+  +G 
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 753 LQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAVVCDS 574
           ++ A  LL +M + GL  D++ YST+I  +   G L+     F+ M+ +G +P+ VV   
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 573 LIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPEFLKLLPTFSSEA 394
           LI GF  +G  +E   +LH M  +G+  DV   + ++  LC+DG + + L L    + + 
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 393 SKETGISCSELLRKLEDSYSGLEVMAA*CCEPWLLDAFRCY 271
            + + ++ + L+  L             C E  + DAF+ +
Sbjct: 181 EEPSTVTYNVLINGL-------------CKEGCIGDAFKIF 208


>ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein At4g28010-like
            [Glycine max]
          Length = 703

 Score =  429 bits (1103), Expect = e-117
 Identities = 215/467 (46%), Positives = 312/467 (66%), Gaps = 3/467 (0%)
 Frame = -3

Query: 1704 VDRGKEFFHKMLDRGMLPNVVTYSCLVRGLCKAGNYQEANNLLKDMVGRGIRPDTVTYTG 1525
            ++ G+E F +ML R + PNVVTYSCL++GL + G ++EA+ +LKDM  RG+RPD V YT 
Sbjct: 236  IETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTV 295

Query: 1524 LIDVLFKGGKFKYAMDFLQWIIDNGEKPSTTTYNVLINGLCKEGLVSDAFKFFNKMAERG 1345
            L D L K G+   A+  L  ++  GE+P T TYNV++NGLCKE  + DAF     M ++G
Sbjct: 296  LADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKG 355

Query: 1344 TPPDVVTFNTLMRGLCHTQQVDDAVVLINKMIEGEYNGEPNTKTYNTLIQGLCSEGRLDE 1165
              PD VT+NTL++GLC   ++ +A+ L   ++  +++ +P+  T N LIQGLC EGR+ +
Sbjct: 356  KKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHD 415

Query: 1164 AMSFYQKMVQKGNLCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMIN 985
            A   +  MV+ G   N+VTYN LI G+L AR + +A +LW+  + +G  PN+ TYS+MIN
Sbjct: 416  AARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMIN 475

Query: 984  GLCKMNMLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKP 805
            GLCKM ML  A+ + C+MK SG  PT   YN  + SLC++ +LEQA +L  EM++ N   
Sbjct: 476  GLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNV 535

Query: 804  DVVSFNILINGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFF 625
            DVVSFNI+I+G L  G++++AKELL +M    L PD +T+S +I+R+SK+G L+EAM  +
Sbjct: 536  DVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLY 595

Query: 624  NYMIARGFAPDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRD 445
              M++ G  P  VV DSL+KG+G +G+ +++I LLHQMA K VVLD  + STIL CLC  
Sbjct: 596  EKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHM 655

Query: 444  GESPEFLKLLPTFSSEA---SKETGISCSELLRKLEDSYSGLEVMAA 313
              + +  K+LP FS ++   SK T I C ELL +L + +  L+++ A
Sbjct: 656  SRNLDVEKILPKFSQQSEHTSKGTTIKCHELLMRLNNFHPELKLIVA 702



 Score =  177 bits (450), Expect = 6e-42
 Identities = 112/410 (27%), Positives = 192/410 (46%), Gaps = 6/410 (1%)
 Frame = -3

Query: 1683 FHKMLDRGML--PNVVTYSCLVRGLCKAGNYQEANNLLKDMVGRGIRPDTVTYTGLIDVL 1510
            FH+ +D      P+    S L+  L KA  Y    ++   MV   + P   + + L +  
Sbjct: 28   FHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESF 87

Query: 1509 FKGGKFKYAMDFLQWIIDNGEKPSTTTYNVLINGLCKEGLVSDAFKFFNKMAERG--TPP 1336
                   +A   L  +   G   +    N+++ G C+ G    A   F++M        P
Sbjct: 88   VNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVP 147

Query: 1335 DVVTFNTLMRGLCHTQQVDDAVVLINKMIEGEYNGEPNTKTYNTLIQGLCSEGRLDEAMS 1156
            D VT+NTL+ G C  +++ +A VL   M +G  +  PN  TY+ LI   C  G + E + 
Sbjct: 148  DCVTYNTLVNGFCKAKRLAEARVLFEAMKKGG-DCRPNLVTYSVLIDCYCKSGEVGEGLG 206

Query: 1155 FYQKMVQKGNLCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMINGLC 976
              ++M ++G   +V  Y+ LI  F    ++   REL+ + L   V PN  TYS ++ GL 
Sbjct: 207  LLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLG 266

Query: 975  KMNMLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVV 796
            +      A E+L +M   G  P    Y    + LCK+G    A+ +L  M     +P  +
Sbjct: 267  RTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTL 326

Query: 795  SFNILINGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFFNYM 616
            ++N+++NG+  +  +  A  ++E MV+ G  PD +TY+T++      G+++EAM  +  +
Sbjct: 327  TYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386

Query: 615  IARGF--APDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVS 472
            ++  F   PD   C++LI+G    G+  +   +   M   G  L  NIV+
Sbjct: 387  LSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMG--LQGNIVT 434



 Score =  153 bits (386), Expect = 2e-34
 Identities = 100/386 (25%), Positives = 179/386 (46%), Gaps = 7/386 (1%)
 Frame = -3

Query: 1485 AMDFLQWIIDNG--EKPSTTTYNVLINGLCKEGLVSDAFKFFNKMAERGTPPDVVTFNTL 1312
            A+      IDN     PS    + LI+ L K          ++KM      P   + + L
Sbjct: 24   AVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSAL 83

Query: 1311 MRGLCHTQQVDDAVVLINKMIEGEYNGEPNTKTYNTLIQGLCSEGRLDEAMSFYQKMVQK 1132
                 +T     A  +++ M +  +    N    N +++G C  G+ D+AMS + +M + 
Sbjct: 84   TESFVNTHHPSFAFSVLSLMTKRGFG--VNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRN 141

Query: 1131 GNLC--NVVTYNLLIGGFLKARNVSKARELWQDTLVAG-VMPNAFTYSIMINGLCKMNML 961
             +    + VTYN L+ GF KA+ +++AR L++     G   PN  TYS++I+  CK   +
Sbjct: 142  YDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEV 201

Query: 960  DSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNIL 781
                 +L EM+  G     +VY+  + + C +G++E    L  EM      P+VV+++ L
Sbjct: 202  GEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCL 261

Query: 780  INGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFFNYMIARGF 601
            + G+   G  + A E+L+DM   G+ PD++ Y+ + D   K G+  +A+   + M+ +G 
Sbjct: 262  MQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGE 321

Query: 600  APDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPEFLK 421
             P  +  + ++ G     +  +   ++  M  KG   D    +T+L  LC  G+  E + 
Sbjct: 322  EPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMD 381

Query: 420  LLPTFSSEA--SKETGISCSELLRKL 349
            L     SE    K    +C+ L++ L
Sbjct: 382  LWKLLLSEKFHVKPDVFTCNNLIQGL 407



 Score =  135 bits (340), Expect = 3e-29
 Identities = 85/339 (25%), Positives = 161/339 (47%), Gaps = 11/339 (3%)
 Frame = -3

Query: 1302 LCHTQ--QVDDAVVLINKMIEGEYNGEPNTKTYNTLIQGLCSEGRLDEAMSFYQKMVQKG 1129
            + HTQ   + DAV L ++ I+ +    P+    +TLI  L    + D  +S Y KMV   
Sbjct: 13   IAHTQPHSLSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSAL 72

Query: 1128 NLCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAK 949
             L    + + L   F+   + S A  +       G   N +  ++++ G C+    D A 
Sbjct: 73   VLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAM 132

Query: 948  EVLCEMKTSGH--TPTAYVYNPFLESLCKDGNLEQAMNLLGEM-KDANCKPDVVSFNILI 778
             +  +MK +     P    YN  +   CK   L +A  L   M K  +C+P++V++++LI
Sbjct: 133  SLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLI 192

Query: 777  NGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFFNYMIARGFA 598
            +     G +     LLE+M + GL  D+  YS++I  +   G +      F+ M+ R  +
Sbjct: 193  DCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVS 252

Query: 597  PDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPEFLKL 418
            P+ V    L++G G  G+ +E  ++L  M A+GV  DV   + + D LC++G + + +K+
Sbjct: 253  PNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKV 312

Query: 417  LPTFSSEASKETGISCSELLR------KLEDSYSGLEVM 319
            L     +  +   ++ + ++       +++D++  +E+M
Sbjct: 313  LDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMM 351


>ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355498244|gb|AES79447.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  427 bits (1097), Expect = e-117
 Identities = 211/452 (46%), Positives = 304/452 (67%)
 Frame = -3

Query: 1704 VDRGKEFFHKMLDRGMLPNVVTYSCLVRGLCKAGNYQEANNLLKDMVGRGIRPDTVTYTG 1525
            ++RGKE F++ML + + PNVVTYSCL+  LCK   ++EA  +L  M G  +RPD V YT 
Sbjct: 250  IERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTV 309

Query: 1524 LIDVLFKGGKFKYAMDFLQWIIDNGEKPSTTTYNVLINGLCKEGLVSDAFKFFNKMAERG 1345
            L D L K G+   A+  L  ++  GE+P+  TYN +INGLCKEG V DA      MA++G
Sbjct: 310  LADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKG 369

Query: 1344 TPPDVVTFNTLMRGLCHTQQVDDAVVLINKMIEGEYNGEPNTKTYNTLIQGLCSEGRLDE 1165
              PDVVT++TL++GLC   ++D+AV L+N ++  E++ +P+   +N +IQ LC + RL  
Sbjct: 370  KKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRH 429

Query: 1164 AMSFYQKMVQKGNLCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMIN 985
            A   Y  MV++G   N+VTYN+LI G+L A  ++KA ELW+D + +G+ PNA TY+++IN
Sbjct: 430  AKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLIN 489

Query: 984  GLCKMNMLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKP 805
            GLCKM ML  AK +  + + SG  PT   YN  + SLC++ ++EQA NL  EM++AN  P
Sbjct: 490  GLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDP 549

Query: 804  DVVSFNILINGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFF 625
            DVVSFNI+I+G L  G++++AKELL +M+   L PD IT+S +I+R+ K+GQL+EA + +
Sbjct: 550  DVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLY 609

Query: 624  NYMIARGFAPDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRD 445
              M++ G  PDAV+ DSL+KG+  +G+ ++V+ +L QMA K VVLD  + STIL CLC  
Sbjct: 610  ERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNM 669

Query: 444  GESPEFLKLLPTFSSEASKETGISCSELLRKL 349
             +  +  K+LP FS   S    I C+ELL KL
Sbjct: 670  SKDVDIEKILPKFSQHTSVGASIKCNELLMKL 701



 Score =  182 bits (463), Expect = 2e-43
 Identities = 112/426 (26%), Positives = 206/426 (48%), Gaps = 3/426 (0%)
 Frame = -3

Query: 1686 FFHKMLDR-GMLPNVVTYSCLVRGLCKAGNYQEANNLLKDMVGRGIRPDTVTYTGLIDVL 1510
            F H + D    +P+  + + L+  L KA +Y    ++   M    + P   + + LI+  
Sbjct: 45   FHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESF 104

Query: 1509 FKGGKFKYAMDFLQWIIDNGEKPSTTTYNVLINGLCKEGLVSDAFKFFNKMAERGTPPDV 1330
                K  +A   L  I+  G   +   +N+L+ G C+ G    A   F  M      PD 
Sbjct: 105  VNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDC 164

Query: 1329 VTFNTLMRGLCHTQQVDDAVVLINKMIEGEYNGEPNTKTYNTLIQGLCSEGRLDEAMSFY 1150
            V++NT++ GLC  +++ +A  L  +M  GE   +PN+ T++ LI G C  G ++E     
Sbjct: 165  VSYNTVINGLCKGKRLVEAKELFKEMKGGEC--KPNSVTFSALIDGFCKNGDVEEGFGLL 222

Query: 1149 QKMVQKGNLCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMINGLCKM 970
            ++M + G   +V  Y+ LI GF    ++ + +EL+ + L   V PN  TYS ++N LCK 
Sbjct: 223  EEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKK 282

Query: 969  NMLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSF 790
                 A ++L  M      P    Y    + L K+G    A+ +L  M     +P+ V++
Sbjct: 283  QKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTY 342

Query: 789  NILINGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFFNYMIA 610
            N +ING+  +G +  A  +LE M + G  PD++TYST++     +G+++EA+   N +++
Sbjct: 343  NAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMS 402

Query: 609  RGF--APDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGES 436
            + F   PD    + +I+    + + +    + + M  +G   ++   + ++D     G+ 
Sbjct: 403  KEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKL 462

Query: 435  PEFLKL 418
             + L+L
Sbjct: 463  TKALEL 468



 Score =  164 bits (415), Expect = 7e-38
 Identities = 93/298 (31%), Positives = 156/298 (52%), Gaps = 2/298 (0%)
 Frame = -3

Query: 1707 KVDRGKEFFHKMLDRGMLPNVVTYSCLVRGLCKAGNYQEANNLLKDMVGR--GIRPDTVT 1534
            +VD        M  +G  P+VVTYS LV+GLC  G   EA +LL  ++ +   I+PD   
Sbjct: 354  RVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFA 413

Query: 1533 YTGLIDVLFKGGKFKYAMDFLQWIIDNGEKPSTTTYNVLINGLCKEGLVSDAFKFFNKMA 1354
            +  +I  L K  + ++A      +++ G   +  TYN+LI+G    G ++ A + +    
Sbjct: 414  FNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAV 473

Query: 1353 ERGTPPDVVTFNTLMRGLCHTQQVDDAVVLINKMIEGEYNGEPNTKTYNTLIQGLCSEGR 1174
            + G  P+  T+  L+ GLC  Q +  A  L NK  +      P    YNTL+  LC E  
Sbjct: 474  DSGISPNAATYTVLINGLCKMQMLSIAKGLFNK--KRASGTRPTVSEYNTLMASLCRESS 531

Query: 1173 LDEAMSFYQKMVQKGNLCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSI 994
            +++A + +Q+M    +  +VV++N++I G LKA +V  A+EL  + L   ++P+  T+SI
Sbjct: 532  VEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSI 591

Query: 993  MINGLCKMNMLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKD 820
            +IN   K+  LD A  +   M + GH P A +++  L+     G  E+ +++L +M D
Sbjct: 592  LINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMAD 649



 Score =  159 bits (401), Expect = 3e-36
 Identities = 94/349 (26%), Positives = 175/349 (50%)
 Frame = -3

Query: 1443 PSTTTYNVLINGLCKEGLVSDAFKFFNKMAERGTPPDVVTFNTLMRGLCHTQQVDDAVVL 1264
            PS ++ N LI+ L K           +KMA     P   + + L+    +TQ+   A  +
Sbjct: 57   PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 1263 INKMIEGEYNGEPNTKTYNTLIQGLCSEGRLDEAMSFYQKMVQKGNLCNVVTYNLLIGGF 1084
            +  +++  ++   N   +N L++G C  G   +AM  +  M +   + + V+YN +I G 
Sbjct: 117  LGLIMKRGFH--LNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGL 174

Query: 1083 LKARNVSKARELWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVLCEMKTSGHTPTA 904
             K + + +A+EL+++       PN+ T+S +I+G CK   ++    +L EM+  G     
Sbjct: 175  CKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDV 234

Query: 903  YVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLNDGNLQTAKELLED 724
            +VY+  +   C  G++E+   L  EM   N  P+VV+++ L+N +      + A ++L+ 
Sbjct: 235  FVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDT 294

Query: 723  MVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAVVCDSLIKGFGARGQ 544
            M    + PD++ Y+ + D  SK G+ ++A+   + M+ RG  P+ V  +++I G    G+
Sbjct: 295  MTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGR 354

Query: 543  RKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPEFLKLLPTFSSE 397
              + + +L  MA KG   DV   ST++  LC  G+  E + LL    S+
Sbjct: 355  VDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSK 403



 Score =  139 bits (351), Expect = 2e-30
 Identities = 86/330 (26%), Positives = 164/330 (49%)
 Frame = -3

Query: 1338 PDVVTFNTLMRGLCHTQQVDDAVVLINKMIEGEYNGEPNTKTYNTLIQGLCSEGRLDEAM 1159
            P   + NTL+  L   +  D  + + +KM     +  P   + + LI+   +  +   A 
Sbjct: 57   PSYSSCNTLIDNLRKAKHYDHVISVHSKM--ASVSVFPCFTSLSALIESFVNTQKPSFAF 114

Query: 1158 SFYQKMVQKGNLCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMINGL 979
                 ++++G   NV  +NLL+ GF ++ +  KA +L+       ++P+  +Y+ +INGL
Sbjct: 115  GVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGL 174

Query: 978  CKMNMLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDV 799
            CK   L  AKE+  EMK     P +  ++  ++  CK+G++E+   LL EM+    + DV
Sbjct: 175  CKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDV 234

Query: 798  VSFNILINGMLNDGNLQTAKELLEDMVQSGLNPDIITYSTIIDRYSKIGQLNEAMTFFNY 619
              ++ LI+G  + G+++  KEL  +M++  + P+++TYS +++   K  +  EA    + 
Sbjct: 235  FVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDT 294

Query: 618  MIARGFAPDAVVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGE 439
            M      PD V    L  G    G+  + I +L  M  +G   +    + I++ LC++G 
Sbjct: 295  MTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGR 354

Query: 438  SPEFLKLLPTFSSEASKETGISCSELLRKL 349
              + L +L T + +  K   ++ S L++ L
Sbjct: 355  VDDALGILETMAKKGKKPDVVTYSTLVKGL 384



 Score =  127 bits (320), Expect = 7e-27
 Identities = 79/313 (25%), Positives = 140/313 (44%), Gaps = 6/313 (1%)
 Frame = -3

Query: 1236 NGEPNTKTYNTLIQGLCSEGRLDEAMSFYQKMVQKGNLCNVVTYNLLIGGFLKARNVSKA 1057
            N  P+  + NTLI  L      D  +S + KM          + + LI  F+  +  S A
Sbjct: 54   NSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFA 113

Query: 1056 RELWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVLCEMKTSGHTPTAYVYNPFLES 877
              +    +  G   N + +++++ G C+      A ++ C MK +   P    YN  +  
Sbjct: 114  FGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVING 173

Query: 876  LCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLNDGNLQTAKELLEDMVQSGLNPD 697
            LCK   L +A  L  EMK   CKP+ V+F+ LI+G   +G+++    LLE+M + GL  D
Sbjct: 174  LCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGD 233

Query: 696  IITYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAVVCDSLIKGFGARGQRKEVIDLLH 517
            +  YS +I  +   G +      FN M+ +   P+ V    L+     + + KE   +L 
Sbjct: 234  VFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLD 293

Query: 516  QMAAKGVVLDVNIVSTILDCLCRDGESPEFLKLLPTFSSEASKETGISCSELLR------ 355
             M    V  DV   + + D L ++G + + +K+L        +   ++ + ++       
Sbjct: 294  TMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEG 353

Query: 354  KLEDSYSGLEVMA 316
            +++D+   LE MA
Sbjct: 354  RVDDALGILETMA 366



 Score =  123 bits (309), Expect = 1e-25
 Identities = 81/265 (30%), Positives = 130/265 (49%)
 Frame = -3

Query: 1707 KVDRGKEFFHKMLDRGMLPNVVTYSCLVRGLCKAGNYQEANNLLKDMVGRGIRPDTVTYT 1528
            ++   K  ++ M++RG   N+VTY+ L+ G   AG   +A  L KD V  GI P+  TYT
Sbjct: 426  RLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYT 485

Query: 1527 GLIDVLFKGGKFKYAMDFLQWIIDNGEKPSTTTYNVLINGLCKEGLVSDAFKFFNKMAER 1348
             LI+ L K      A         +G +P+ + YN L+  LC+E  V  A   F +M   
Sbjct: 486  VLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNA 545

Query: 1347 GTPPDVVTFNTLMRGLCHTQQVDDAVVLINKMIEGEYNGEPNTKTYNTLIQGLCSEGRLD 1168
               PDVV+FN ++ G      V+ A  L+ +M+    N  P+  T++ LI      G+LD
Sbjct: 546  NHDPDVVSFNIIIDGTLKAGDVESAKELLLEML--NMNLVPDNITFSILINRFLKLGQLD 603

Query: 1167 EAMSFYQKMVQKGNLCNVVTYNLLIGGFLKARNVSKARELWQDTLVAGVMPNAFTYSIMI 988
            EA S Y++MV  G++ + V ++ L+ G+       K   + Q      V+ ++   S ++
Sbjct: 604  EAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTIL 663

Query: 987  NGLCKMNMLDSAKEVLCEMKTSGHT 913
              LC M+     +++L   K S HT
Sbjct: 664  ACLCNMSKDVDIEKIL--PKFSQHT 686