BLASTX nr result

ID: Coptis25_contig00013788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013788
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515994.1| Cytochrome c oxidase assembly protein COX19,...    94   1e-17
ref|XP_002299727.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-17
ref|XP_002284168.1| PREDICTED: cytochrome c oxidase assembly pro...    91   1e-16
ref|XP_002893372.1| predicted protein [Arabidopsis lyrata subsp....    89   3e-16
ref|XP_004141761.1| PREDICTED: cytochrome c oxidase assembly pro...    89   4e-16

>ref|XP_002515994.1| Cytochrome c oxidase assembly protein COX19, putative [Ricinus
           communis] gi|223544899|gb|EEF46414.1| Cytochrome c
           oxidase assembly protein COX19, putative [Ricinus
           communis]
          Length = 94

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 42/62 (67%), Positives = 52/62 (83%)
 Frame = -2

Query: 519 QCLKEKKEYVSCLKTSGHNAEKCRRFSKMYLECRMAKNLMAKQDMSELGFSKEHDMNSSA 340
           +C  EKK+Y++CLK+SGH +EKCR FSK YLECRM KNLMA+QDMSELGF KE D+ +S 
Sbjct: 30  ECDLEKKDYLNCLKSSGHQSEKCRLFSKKYLECRMEKNLMARQDMSELGFRKEPDLEASG 89

Query: 339 EK 334
           E+
Sbjct: 90  ER 91


>ref|XP_002299727.1| predicted protein [Populus trichocarpa] gi|222846985|gb|EEE84532.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 41/62 (66%), Positives = 51/62 (82%)
 Frame = -2

Query: 519 QCLKEKKEYVSCLKTSGHNAEKCRRFSKMYLECRMAKNLMAKQDMSELGFSKEHDMNSSA 340
           +C  EKK+Y++CLK+SGH +EKCR FSK YLECRM KNLMAKQDMSELGF K  ++++  
Sbjct: 30  ECDLEKKDYLNCLKSSGHQSEKCRLFSKKYLECRMEKNLMAKQDMSELGFGKVSEIDAPG 89

Query: 339 EK 334
           EK
Sbjct: 90  EK 91


>ref|XP_002284168.1| PREDICTED: cytochrome c oxidase assembly protein COX19 [Vitis
           vinifera] gi|297743230|emb|CBI36097.3| unnamed protein
           product [Vitis vinifera]
          Length = 98

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/64 (67%), Positives = 51/64 (79%)
 Frame = -2

Query: 519 QCLKEKKEYVSCLKTSGHNAEKCRRFSKMYLECRMAKNLMAKQDMSELGFSKEHDMNSSA 340
           +C  EK EY+SCLK+SG+N+EKCR  SK YL+CRM KNLMAKQD+SELGF KE D  SS 
Sbjct: 30  ECDLEKIEYISCLKSSGNNSEKCRHLSKKYLQCRMDKNLMAKQDLSELGFRKEADTVSSE 89

Query: 339 EKNE 328
            KN+
Sbjct: 90  GKND 93


>ref|XP_002893372.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339214|gb|EFH69631.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 93

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/62 (67%), Positives = 49/62 (79%)
 Frame = -2

Query: 519 QCLKEKKEYVSCLKTSGHNAEKCRRFSKMYLECRMAKNLMAKQDMSELGFSKEHDMNSSA 340
           QC  EKK Y+ CLK+SGH +E+CR  SK YLECRMAKNLMAKQDMSELGFS   +++S  
Sbjct: 30  QCDTEKKGYLDCLKSSGHKSEQCRHLSKTYLECRMAKNLMAKQDMSELGFSGVTELDSIV 89

Query: 339 EK 334
           EK
Sbjct: 90  EK 91


>ref|XP_004141761.1| PREDICTED: cytochrome c oxidase assembly protein COX19-like
           [Cucumis sativus]
          Length = 95

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/63 (66%), Positives = 47/63 (74%)
 Frame = -2

Query: 516 CLKEKKEYVSCLKTSGHNAEKCRRFSKMYLECRMAKNLMAKQDMSELGFSKEHDMNSSAE 337
           C  EKKEY++CLKTSGH +EKCR  SK YLECRM KNLMAKQDM+ELGF      N S +
Sbjct: 31  CDLEKKEYLNCLKTSGHKSEKCRHLSKRYLECRMEKNLMAKQDMTELGFGNLSQANLSGD 90

Query: 336 KNE 328
           K E
Sbjct: 91  KLE 93


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