BLASTX nr result

ID: Coptis25_contig00013778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013778
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   120   2e-25
ref|XP_003547376.1| PREDICTED: ABC transporter C family member 4...   114   1e-23
ref|XP_003533361.1| PREDICTED: ABC transporter C family member 4...   112   4e-23
ref|XP_003628563.1| Multidrug resistance protein ABC transporter...   110   2e-22
ref|XP_002321011.1| multidrug resistance protein ABC transporter...   108   6e-22

>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  120 bits (301), Expect = 2e-25
 Identities = 66/153 (43%), Positives = 93/153 (60%), Gaps = 11/153 (7%)
 Frame = -1

Query: 427 FSAILQWLRFIFLSPCPQRAIFSSVDXXXXXXXXXXXIQKLCSRTHSND----------- 281
           FS ILQWLRFIFLSPCPQRA+ SS+D           +QKL SR  SN            
Sbjct: 25  FSLILQWLRFIFLSPCPQRALLSSIDLLFLLTLIAFSVQKLYSRFISNGRSSSAINKPLI 84

Query: 280 RNNISHLRTSLCYNVTLFLSALLAITYTVLSVLAFTKVAQSSWELVEAIFRXXXXXXXXX 101
           RNN + LRT+L + +TL  +ALLA+ +  L +LAF + AQ  W+L++A+F          
Sbjct: 85  RNNRARLRTTLWFKLTLTATALLAVCHGFLCILAFARGAQMPWKLIDALFWLVEAITHFL 144

Query: 100 XXXXXXHEKRFKAVTHPVTLRVYWIVNFVVVAL 2
                 H KRF+AVT+P++LR++W+V+F++ +L
Sbjct: 145 ITILIAHGKRFQAVTYPLSLRIFWVVSFIISSL 177


>ref|XP_003547376.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1501

 Score =  114 bits (286), Expect = 1e-23
 Identities = 64/150 (42%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
 Frame = -1

Query: 418 ILQWLRFIFLSPCPQRAIFSSVDXXXXXXXXXXXIQKLCSRTHSNDRNNI---------- 269
           I+QWLRFIFLSPCPQR + S+VD             KL SR  SN  +N           
Sbjct: 30  IVQWLRFIFLSPCPQRVLLSAVDSIFLLSLLAFAAAKLYSRFTSNATSNSTITKPLLQEK 89

Query: 268 -SHLRTSLCYNVTLFLSALLAITYTVLSVLAFTKVAQSSWELVEAIFRXXXXXXXXXXXX 92
            S  + +  + + L ++ LLAI YTVLS+LAFT+ +  SW+L+EA+FR            
Sbjct: 90  DSDYKVTFWFKLPLLVTTLLAIAYTVLSILAFTQTSLPSWKLIEALFRLFQAVSNIVVAI 149

Query: 91  XXXHEKRFKAVTHPVTLRVYWIVNFVVVAL 2
              HEK+FKA  HP++LR+YWI N VV  L
Sbjct: 150 LMVHEKKFKASKHPLSLRIYWIANLVVSCL 179


>ref|XP_003533361.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1506

 Score =  112 bits (281), Expect = 4e-23
 Identities = 63/150 (42%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
 Frame = -1

Query: 418 ILQWLRFIFLSPCPQRAIFSSVDXXXXXXXXXXXIQKLCSRTHSNDRNNI---------- 269
           I+QWLRFI LSPCPQR + S+VD             KL SR  SN  +N           
Sbjct: 30  IVQWLRFILLSPCPQRVLLSAVDSIFLLSLLAFAAVKLYSRFTSNTTSNNTITKPLLQEK 89

Query: 268 -SHLRTSLCYNVTLFLSALLAITYTVLSVLAFTKVAQSSWELVEAIFRXXXXXXXXXXXX 92
            S  + +  + + L ++ LLAI YTVLS+LAFT+ + SSW+L+EA+FR            
Sbjct: 90  DSDYKVTFWFKLPLLVTTLLAIAYTVLSILAFTQTSLSSWKLIEALFRLFQAASNIVVAI 149

Query: 91  XXXHEKRFKAVTHPVTLRVYWIVNFVVVAL 2
              HEK+FKA  HP++LR+YWI N +V  L
Sbjct: 150 LMAHEKKFKASKHPLSLRIYWIANLMVSCL 179


>ref|XP_003628563.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula] gi|355522585|gb|AET03039.1| Multidrug
           resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 1498

 Score =  110 bits (275), Expect = 2e-22
 Identities = 61/147 (41%), Positives = 85/147 (57%), Gaps = 8/147 (5%)
 Frame = -1

Query: 418 ILQWLRFIFLSPCPQRAIFSSVDXXXXXXXXXXXIQKLCSRTHSND-------RNNISHL 260
           ILQWL F+FLSPCPQR + S++D           + KL SR ++         +   S  
Sbjct: 28  ILQWLTFLFLSPCPQRLLLSALDSLFLLSLLASAVHKLYSRANTTSSITKPLLKEKDSDY 87

Query: 259 RTSLCYNVTLFLSALLAITYTVLSVLAFTKVAQ-SSWELVEAIFRXXXXXXXXXXXXXXX 83
           R +L + +TL ++ LLAITYTVL +LAFT+    SSW+ +EA FR               
Sbjct: 88  RVTLWFKLTLLVTTLLAITYTVLGILAFTQTNNLSSWKQIEAPFRLFQAVVNIVIVILML 147

Query: 82  HEKRFKAVTHPVTLRVYWIVNFVVVAL 2
           HEK+FK+  HP++LR+YWI NFV+ +L
Sbjct: 148 HEKKFKSSKHPLSLRIYWIANFVIASL 174


>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1507

 Score =  108 bits (271), Expect = 6e-22
 Identities = 58/153 (37%), Positives = 88/153 (57%), Gaps = 14/153 (9%)
 Frame = -1

Query: 418 ILQWLRFIFLSPCPQRAIFSSVDXXXXXXXXXXXIQKLCSRTHSN-------------DR 278
           I QWLRFIFLSPCPQRA+ SSVD            QKL SR  S+             + 
Sbjct: 28  IFQWLRFIFLSPCPQRALLSSVDLLFLLFLLGFAAQKLHSRFTSSGYSGSDINYPLVGNG 87

Query: 277 NNISHLRTSLCYNVTLFLSALLAITYTVLSVLAFTKVAQ-SSWELVEAIFRXXXXXXXXX 101
           N+ +H+ TS+ + ++L +   LA+ Y V+S+LAF++  Q   W++++ +F          
Sbjct: 88  NSRAHITTSIWFKLSLIVPVFLALCYIVVSILAFSQSTQLPRWKVLDGVFWLVQAITQLV 147

Query: 100 XXXXXXHEKRFKAVTHPVTLRVYWIVNFVVVAL 2
                 HEKRF AVTHP++LR+YW+ NF+++++
Sbjct: 148 VAILIIHEKRFHAVTHPLSLRIYWVANFIIISM 180


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