BLASTX nr result
ID: Coptis25_contig00013772
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00013772
(979 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263259.1| PREDICTED: uncharacterized protein LOC100253... 167 3e-39
ref|XP_002521950.1| synovial sarcoma associated ss18 protein, pu... 160 3e-37
ref|XP_002332027.1| predicted protein [Populus trichocarpa] gi|2... 156 8e-36
gb|ABK94681.1| unknown [Populus trichocarpa] 156 8e-36
ref|XP_003521762.1| PREDICTED: uncharacterized protein LOC100801... 155 2e-35
>ref|XP_002263259.1| PREDICTED: uncharacterized protein LOC100253609 [Vitis vinifera]
Length = 223
Score = 167 bits (424), Expect = 3e-39
Identities = 104/212 (49%), Positives = 121/212 (57%), Gaps = 4/212 (1%)
Frame = -2
Query: 741 YNPNNVTTDHIQQYLDENKSLILKILENQNCGKLSECAENQARLQRNLMYLAAIADSQPQ 562
Y P+NVTTDHIQQYLDENKSLILKI+E+QN GKL+ECAENQARLQRNLMYLAAIADSQPQ
Sbjct: 15 YYPSNVTTDHIQQYLDENKSLILKIVESQNSGKLTECAENQARLQRNLMYLAAIADSQPQ 74
Query: 561 PPNVHAQY-SGAPMQPGAHYXXXXXXXXXXXXXXXXARSSLLYA-QPLSAMQQQQA--XX 394
PP +HAQ+ +QPGAHY ARSS+LY+ QP SA+QQQQA
Sbjct: 75 PPTMHAQFPPSGIVQPGAHYMQHQQAQQMTPQSLLAARSSMLYSQQPFSALQQQQAIHSQ 134
Query: 393 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYPDFGRGSGGEGLQASSRAVTIASKQDVX 214
G+PDF RG+ GEGLQA+ R + SKQD+
Sbjct: 135 LGMGSGGSAGLHMLQSEGSNPGGNGTLGTGGFPDFSRGTSGEGLQAAGRGMAGGSKQDM- 193
Query: 213 XXXXXXXXXXXXXXXXXXXXXSLYLKNGEEGN 118
+LYLK E+GN
Sbjct: 194 --GNAEGRGGNSGGQGGDGGETLYLKAAEDGN 223
>ref|XP_002521950.1| synovial sarcoma associated ss18 protein, putative [Ricinus
communis] gi|223538754|gb|EEF40354.1| synovial sarcoma
associated ss18 protein, putative [Ricinus communis]
Length = 219
Score = 160 bits (406), Expect = 3e-37
Identities = 100/212 (47%), Positives = 117/212 (55%), Gaps = 4/212 (1%)
Frame = -2
Query: 741 YNPNNVTTDHIQQYLDENKSLILKILENQNCGKLSECAENQARLQRNLMYLAAIADSQPQ 562
Y PNNVTTDHIQQYLDENKSLILKI+E+QN GK+SECAENQARLQRNLMYLAAIADSQPQ
Sbjct: 15 YYPNNVTTDHIQQYLDENKSLILKIVESQNSGKISECAENQARLQRNLMYLAAIADSQPQ 74
Query: 561 PPNVHAQYSGAP-MQPGAHYXXXXXXXXXXXXXXXXARSSLLYA-QPLSAMQQQQA--XX 394
PPN+H+Q+S + MQPGAHY ARSS+LY Q +A+QQQQA
Sbjct: 75 PPNMHSQFSSSGIMQPGAHYMQHQQAQQMTPQSVMAARSSMLYTQQQYAALQQQQALHSQ 134
Query: 393 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYPDFGRGSGGEGLQASSRAVTIASKQDVX 214
G+PDFGR + G G+ SKQD+
Sbjct: 135 LGMSSGGSPGLHMLQSEASTAGGSGGLGAGGFPDFGRDASGRGMAG-------GSKQDMG 187
Query: 213 XXXXXXXXXXXXXXXXXXXXXSLYLKNGEEGN 118
+LYLK+ +EGN
Sbjct: 188 NAGSGEGRGGNSGGQGSDGGENLYLKSADEGN 219
>ref|XP_002332027.1| predicted protein [Populus trichocarpa] gi|222875252|gb|EEF12383.1|
predicted protein [Populus trichocarpa]
Length = 220
Score = 156 bits (394), Expect = 8e-36
Identities = 100/213 (46%), Positives = 116/213 (54%), Gaps = 5/213 (2%)
Frame = -2
Query: 741 YNPNNVTTDHIQQYLDENKSLILKILENQNCGKLSECAENQARLQRNLMYLAAIADSQPQ 562
Y P+NVTTDHIQQYLDENKSLILKI+E+QN GKLSECAENQARLQ+NLMYLAAIAD QPQ
Sbjct: 15 YYPSNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQQNLMYLAAIADCQPQ 74
Query: 561 PPNVHAQY-SGAPMQPGAHYXXXXXXXXXXXXXXXXARSSLL-YA-QPLSAMQQQQA--X 397
PP +HAQ+ S MQPGAHY ARSS+L YA QP SA+QQQQA
Sbjct: 75 PPTMHAQFPSSGIMQPGAHYMQHQQAQQMTPQALMAARSSMLQYAQQPFSALQQQQALHS 134
Query: 396 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYPDFGRGSGGEGLQASSRAVTIASKQDV 217
+PDF G+ ASSR + SKQD+
Sbjct: 135 QLGMSSGGSAGLHMMQSEANTAGGSGALGAGRFPDF-------GMDASSRGIASGSKQDI 187
Query: 216 XXXXXXXXXXXXXXXXXXXXXXSLYLKNGEEGN 118
+LYLK+ ++GN
Sbjct: 188 RSAGSSEGRGGSSGGQGGDGGETLYLKSADDGN 220
>gb|ABK94681.1| unknown [Populus trichocarpa]
Length = 213
Score = 156 bits (394), Expect = 8e-36
Identities = 100/213 (46%), Positives = 116/213 (54%), Gaps = 5/213 (2%)
Frame = -2
Query: 741 YNPNNVTTDHIQQYLDENKSLILKILENQNCGKLSECAENQARLQRNLMYLAAIADSQPQ 562
Y P+NVTTDHIQQYLDENKSLILKI+E+QN GKLSECAENQARLQ+NLMYLAAIAD QPQ
Sbjct: 8 YYPSNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQQNLMYLAAIADCQPQ 67
Query: 561 PPNVHAQY-SGAPMQPGAHYXXXXXXXXXXXXXXXXARSSLL-YA-QPLSAMQQQQA--X 397
PP +HAQ+ S MQPGAHY ARSS+L YA QP SA+QQQQA
Sbjct: 68 PPTMHAQFPSSGIMQPGAHYMQHQQAQQMTPQALMAARSSMLQYAQQPFSALQQQQALHS 127
Query: 396 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYPDFGRGSGGEGLQASSRAVTIASKQDV 217
+PDF G+ ASSR + SKQD+
Sbjct: 128 QLGMSSGGSAGLHMMQSEANTAGGSGALGAGRFPDF-------GMDASSRGIASGSKQDI 180
Query: 216 XXXXXXXXXXXXXXXXXXXXXXSLYLKNGEEGN 118
+LYLK+ ++GN
Sbjct: 181 RSAGSSEGRGGSSGGQGGDGGETLYLKSADDGN 213
>ref|XP_003521762.1| PREDICTED: uncharacterized protein LOC100801134 [Glycine max]
Length = 225
Score = 155 bits (391), Expect = 2e-35
Identities = 97/184 (52%), Positives = 107/184 (58%), Gaps = 9/184 (4%)
Frame = -2
Query: 741 YNPNNVTTDHIQQYLDENKSLILKILENQNCGKLSECAENQARLQRNLMYLAAIADSQPQ 562
Y PNNVTTDHIQQYLDENKSLILKI+E+QN GKLSECAENQARLQRNLMYLAAIADSQPQ
Sbjct: 15 YYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQ 74
Query: 561 PPNVHAQY-SGAPMQPGAHY-XXXXXXXXXXXXXXXXARSSLLYA-QPLSAMQQQQAXXX 391
PP + QY MQ GAHY ARSSLLYA QP SA+QQQQA
Sbjct: 75 PPTMPGQYPPSGMMQQGAHYMQAQQQTQQMSPQQLMAARSSLLYAQQPYSALQQQQAMHS 134
Query: 390 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYPDFGRGSG------GEGLQASSRAVTIAS 229
G+PD RG G GEGL + R + +S
Sbjct: 135 ALGSSSGLHMLQSEGSNVNVGSGSGSVGGGFPDLVRGGGGGGGSTGEGLHSGGRGIMGSS 194
Query: 228 KQDV 217
KQ++
Sbjct: 195 KQEI 198