BLASTX nr result

ID: Coptis25_contig00013769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013769
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633806.1| PREDICTED: uncharacterized protein LOC100250...   325   1e-86
ref|XP_002298555.1| predicted protein [Populus trichocarpa] gi|2...   323   5e-86
ref|XP_003633807.1| PREDICTED: uncharacterized protein LOC100250...   317   4e-84
ref|XP_003553408.1| PREDICTED: uncharacterized protein LOC100526...   313   5e-83
ref|NP_189382.2| SGF29 tudor-like domain-containing protein [Ara...   310   4e-82

>ref|XP_003633806.1| PREDICTED: uncharacterized protein LOC100250716 isoform 1 [Vitis
            vinifera]
          Length = 270

 Score =  325 bits (834), Expect = 1e-86
 Identities = 169/272 (62%), Positives = 207/272 (76%), Gaps = 1/272 (0%)
 Frame = -1

Query: 1122 MGTVEMSSILDNSKELDRLKKDQDELLLEINKIHKKLQTTPEIIDKSGDTVLTKLRGLYV 943
            M + +++ IL+ SK+LDRL+++QDE+L EINK+HKKLQ+ PE+++K  D+ L+KLR LY 
Sbjct: 1    MSSPDITGILETSKDLDRLRREQDEILQEINKLHKKLQSAPEMVEKPTDSSLSKLRALYY 60

Query: 942  QAKDLAEIELSVSNTLMAQLDTLLQSA-GPAGQRKKIEVTEQKKKRMKADSDMSRHSTAA 766
            QA+DL+E E+SVSN L+AQLD LL SA  P  QR++I+ +EQKKKRMK DSD+SR S   
Sbjct: 61   QARDLSENEVSVSNQLLAQLDALLPSAPAPGQQRRRIDGSEQKKKRMKTDSDISRPSP-- 118

Query: 765  SMRSQLELAAGLKGEQVAARVTPDDAEKDEWFVVKVIHFDKDAKXXXXXXXXXXXXXXXX 586
            S+R+QLE+AA LKGEQVAARVTPDDA+KDEWFVVKVIHFD+DA+                
Sbjct: 119  SIRNQLEVAASLKGEQVAARVTPDDADKDEWFVVKVIHFDRDAREFEVLDEEPGDDEESS 178

Query: 585  GQRTYKLPMSRIIPFPKRSDPSSAPDYPTGKHVLAVYPTTTALYKATVVNPHRKRKAXXX 406
            GQR YKLPMS IIPFPKR+D +  PD+P G+ VLAVYP TTALYKATVVNPHRKRK    
Sbjct: 179  GQRKYKLPMSHIIPFPKRNDTNGVPDFPNGRQVLAVYPGTTALYKATVVNPHRKRKTDDY 238

Query: 405  XXXXXXXXXDGSMPQRTVPFHKVVPLPDGHRQ 310
                     DGS+PQR VPFHKVV LP+GHRQ
Sbjct: 239  VLEFDDDEEDGSLPQRVVPFHKVVALPEGHRQ 270


>ref|XP_002298555.1| predicted protein [Populus trichocarpa] gi|222845813|gb|EEE83360.1|
            predicted protein [Populus trichocarpa]
          Length = 269

 Score =  323 bits (828), Expect = 5e-86
 Identities = 168/271 (61%), Positives = 206/271 (76%)
 Frame = -1

Query: 1122 MGTVEMSSILDNSKELDRLKKDQDELLLEINKIHKKLQTTPEIIDKSGDTVLTKLRGLYV 943
            M + ++  IL+NSKELDRL+K+Q+++LL+INK+HKKLQ TPE+++K GDT L KL+ LY 
Sbjct: 1    MASSDIGLILENSKELDRLRKEQEDVLLDINKMHKKLQATPEVVEKPGDTSLAKLKTLYT 60

Query: 942  QAKDLAEIELSVSNTLMAQLDTLLQSAGPAGQRKKIEVTEQKKKRMKADSDMSRHSTAAS 763
            QAK+L+E E+SVS+ L+ QLD LL S  P  QR++IE  +QK+KR+KADSD+SR S A  
Sbjct: 61   QAKELSESEVSVSSALLTQLDALLPSGPPGQQRRRIEGNDQKRKRIKADSDISRLSPA-- 118

Query: 762  MRSQLELAAGLKGEQVAARVTPDDAEKDEWFVVKVIHFDKDAKXXXXXXXXXXXXXXXXG 583
            +RSQLE  A LKGEQVAARVT D+AEKDEWFVVKVIHFD++ K                G
Sbjct: 119  VRSQLEACASLKGEQVAARVTGDNAEKDEWFVVKVIHFDRETKEFEVLDEEPGDDEESGG 178

Query: 582  QRTYKLPMSRIIPFPKRSDPSSAPDYPTGKHVLAVYPTTTALYKATVVNPHRKRKAXXXX 403
            QR YKLPMS IIPFPKR+DPSSAPD+P G+HVLAVYP TTALYKATVV+P RKRK     
Sbjct: 179  QRKYKLPMSCIIPFPKRNDPSSAPDFPPGRHVLAVYPGTTALYKATVVSPLRKRKIDDYL 238

Query: 402  XXXXXXXXDGSMPQRTVPFHKVVPLPDGHRQ 310
                    DG++PQR VPF+KVVPLP+GHRQ
Sbjct: 239  LEFDDDEEDGALPQRIVPFYKVVPLPEGHRQ 269


>ref|XP_003633807.1| PREDICTED: uncharacterized protein LOC100250716 isoform 2 [Vitis
            vinifera] gi|296087578|emb|CBI34834.3| unnamed protein
            product [Vitis vinifera]
          Length = 281

 Score =  317 bits (812), Expect = 4e-84
 Identities = 169/283 (59%), Positives = 207/283 (73%), Gaps = 12/283 (4%)
 Frame = -1

Query: 1122 MGTVEMSSILDNSKELDRLKKDQDELLLEINKIHKKLQT-----------TPEIIDKSGD 976
            M + +++ IL+ SK+LDRL+++QDE+L EINK+HKKLQ+            PE+++K  D
Sbjct: 1    MSSPDITGILETSKDLDRLRREQDEILQEINKLHKKLQSGREKSGIKMAGAPEMVEKPTD 60

Query: 975  TVLTKLRGLYVQAKDLAEIELSVSNTLMAQLDTLLQSA-GPAGQRKKIEVTEQKKKRMKA 799
            + L+KLR LY QA+DL+E E+SVSN L+AQLD LL SA  P  QR++I+ +EQKKKRMK 
Sbjct: 61   SSLSKLRALYYQARDLSENEVSVSNQLLAQLDALLPSAPAPGQQRRRIDGSEQKKKRMKT 120

Query: 798  DSDMSRHSTAASMRSQLELAAGLKGEQVAARVTPDDAEKDEWFVVKVIHFDKDAKXXXXX 619
            DSD+SR S   S+R+QLE+AA LKGEQVAARVTPDDA+KDEWFVVKVIHFD+DA+     
Sbjct: 121  DSDISRPSP--SIRNQLEVAASLKGEQVAARVTPDDADKDEWFVVKVIHFDRDAREFEVL 178

Query: 618  XXXXXXXXXXXGQRTYKLPMSRIIPFPKRSDPSSAPDYPTGKHVLAVYPTTTALYKATVV 439
                       GQR YKLPMS IIPFPKR+D +  PD+P G+ VLAVYP TTALYKATVV
Sbjct: 179  DEEPGDDEESSGQRKYKLPMSHIIPFPKRNDTNGVPDFPNGRQVLAVYPGTTALYKATVV 238

Query: 438  NPHRKRKAXXXXXXXXXXXXDGSMPQRTVPFHKVVPLPDGHRQ 310
            NPHRKRK             DGS+PQR VPFHKVV LP+GHRQ
Sbjct: 239  NPHRKRKTDDYVLEFDDDEEDGSLPQRVVPFHKVVALPEGHRQ 281


>ref|XP_003553408.1| PREDICTED: uncharacterized protein LOC100526864 isoform 2 [Glycine
            max]
          Length = 269

 Score =  313 bits (802), Expect = 5e-83
 Identities = 164/272 (60%), Positives = 202/272 (74%), Gaps = 1/272 (0%)
 Frame = -1

Query: 1122 MGTVEMSSILDNSKELDRLKKDQDELLLEINKIHKKLQTTPEIIDKSGDTVLTKLRGLYV 943
            M + ++ SILDNSKELDR++K+Q+++L EINK+HKKLQ TPE+++K GD  L +L+ LY 
Sbjct: 1    MSSPDIVSILDNSKELDRVRKEQEDILSEINKLHKKLQATPEVVEKPGDNSLARLKFLYT 60

Query: 942  QAKDLAEIELSVSNTLMAQLDTLLQSAGPAGQ-RKKIEVTEQKKKRMKADSDMSRHSTAA 766
            QAK+L+E E S+SN L+ Q+D LL + GP GQ R++IE  EQK+KR+K +SD+SR     
Sbjct: 61   QAKELSESEASISNLLINQIDALLPT-GPQGQTRRRIEGNEQKRKRVKTESDISR--LTP 117

Query: 765  SMRSQLELAAGLKGEQVAARVTPDDAEKDEWFVVKVIHFDKDAKXXXXXXXXXXXXXXXX 586
            SMR QLE  A LKGEQVAARVTP +A+KDEWFVVKVIHFDK++K                
Sbjct: 118  SMRGQLEACANLKGEQVAARVTPRNADKDEWFVVKVIHFDKESKEFEVLDEEPGDDEESS 177

Query: 585  GQRTYKLPMSRIIPFPKRSDPSSAPDYPTGKHVLAVYPTTTALYKATVVNPHRKRKAXXX 406
            GQR YKLPM+ IIPFPK +DPSSA D+P G+HVLAVYP TTALYKATVV  HR+RK    
Sbjct: 178  GQRQYKLPMANIIPFPKSNDPSSAQDFPPGRHVLAVYPGTTALYKATVVQGHRRRKTEDY 237

Query: 405  XXXXXXXXXDGSMPQRTVPFHKVVPLPDGHRQ 310
                     DGS+PQRTVPFHKVVPLP+GHRQ
Sbjct: 238  VLEFDDDEEDGSLPQRTVPFHKVVPLPEGHRQ 269


>ref|NP_189382.2| SGF29 tudor-like domain-containing protein [Arabidopsis thaliana]
            gi|19347735|gb|AAL86293.1| unknown protein [Arabidopsis
            thaliana] gi|21689749|gb|AAM67518.1| unknown protein
            [Arabidopsis thaliana] gi|332643801|gb|AEE77322.1| SGF29
            tudor-like domain-containing protein [Arabidopsis
            thaliana]
          Length = 270

 Score =  310 bits (794), Expect = 4e-82
 Identities = 159/267 (59%), Positives = 202/267 (75%)
 Frame = -1

Query: 1110 EMSSILDNSKELDRLKKDQDELLLEINKIHKKLQTTPEIIDKSGDTVLTKLRGLYVQAKD 931
            +++ ILDN+KELDRL+K+Q+E+L+EINK+HKKLQ TPEI++K GD  L+KL+ LY+QAK+
Sbjct: 6    DIAGILDNTKELDRLRKEQEEVLVEINKMHKKLQATPEIVEKPGDISLSKLKNLYIQAKE 65

Query: 930  LAEIELSVSNTLMAQLDTLLQSAGPAGQRKKIEVTEQKKKRMKADSDMSRHSTAASMRSQ 751
            L+E E++VSN L+ QLD+LL S     QR+K+E  EQK+KRMK D+D++R   + SMR+Q
Sbjct: 66   LSESEVTVSNILLTQLDSLLPSGPTGQQRRKLEGNEQKRKRMKVDTDVTR--VSPSMRNQ 123

Query: 750  LELAAGLKGEQVAARVTPDDAEKDEWFVVKVIHFDKDAKXXXXXXXXXXXXXXXXGQRTY 571
            +E  A LKGEQVAARVT +DAEKDEWFVVKVIHFD++ K                GQRTY
Sbjct: 124  IEAYASLKGEQVAARVTAEDAEKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEGGGQRTY 183

Query: 570  KLPMSRIIPFPKRSDPSSAPDYPTGKHVLAVYPTTTALYKATVVNPHRKRKAXXXXXXXX 391
            KL MS I+PFPKR+DPSS  ++  GKHVLAVYP TTALYKATV++  RKRK+        
Sbjct: 184  KLSMSCILPFPKRNDPSSTQEFIPGKHVLAVYPGTTALYKATVISTPRKRKSDEYLLEFD 243

Query: 390  XXXXDGSMPQRTVPFHKVVPLPDGHRQ 310
                DG++PQRTVPFHKVV LP+GHRQ
Sbjct: 244  DDEEDGALPQRTVPFHKVVALPEGHRQ 270


Top