BLASTX nr result

ID: Coptis25_contig00013744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013744
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002465180.1| hypothetical protein SORBIDRAFT_01g033440 [S...    58   7e-07
gb|EEC75398.1| hypothetical protein OsI_11888 [Oryza sativa Indi...    58   9e-07
ref|NP_001050284.1| Os03g0392400 [Oryza sativa Japonica Group] g...    58   9e-07
ref|XP_003557774.1| PREDICTED: uncharacterized protein LOC100846...    57   2e-06
dbj|BAJ91004.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   4e-06

>ref|XP_002465180.1| hypothetical protein SORBIDRAFT_01g033440 [Sorghum bicolor]
           gi|241919034|gb|EER92178.1| hypothetical protein
           SORBIDRAFT_01g033440 [Sorghum bicolor]
          Length = 403

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/44 (54%), Positives = 37/44 (84%)
 Frame = +2

Query: 122 KPEAERWIEVSGKLLEAKDLLGSQRFAKRAQETDPNIDGAEQIL 253
           +P+AERW+E++ KLL A+DL+G +RFA+RA E DP + GA+++L
Sbjct: 23  QPQAERWLEIAEKLLSARDLVGCKRFAERAVEADPLLPGADELL 66


>gb|EEC75398.1| hypothetical protein OsI_11888 [Oryza sativa Indica Group]
          Length = 379

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/42 (57%), Positives = 36/42 (85%)
 Frame = +2

Query: 128 EAERWIEVSGKLLEAKDLLGSQRFAKRAQETDPNIDGAEQIL 253
           +AERW+E++GKLL A+DL+G +RFA+RA E DP + GA+++L
Sbjct: 18  QAERWLEIAGKLLAARDLVGCKRFAERAVEADPLLPGADELL 59


>ref|NP_001050284.1| Os03g0392400 [Oryza sativa Japonica Group]
           gi|29824463|gb|AAP04178.1| putative AT hook-containing
           MAR binding protein [Oryza sativa Japonica Group]
           gi|40539020|gb|AAR87277.1| putative AT hook-containing
           MAR binding protein [Oryza sativa Japonica Group]
           gi|108708584|gb|ABF96379.1| DnaJ domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|108708585|gb|ABF96380.1| DnaJ domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|108708586|gb|ABF96381.1| DnaJ domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113548755|dbj|BAF12198.1| Os03g0392400 [Oryza sativa
           Japonica Group] gi|125586527|gb|EAZ27191.1| hypothetical
           protein OsJ_11127 [Oryza sativa Japonica Group]
           gi|215741022|dbj|BAG97517.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 405

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/42 (57%), Positives = 36/42 (85%)
 Frame = +2

Query: 128 EAERWIEVSGKLLEAKDLLGSQRFAKRAQETDPNIDGAEQIL 253
           +AERW+E++GKLL A+DL+G +RFA+RA E DP + GA+++L
Sbjct: 18  QAERWLEIAGKLLAARDLVGCKRFAERAVEADPLLPGADELL 59


>ref|XP_003557774.1| PREDICTED: uncharacterized protein LOC100846339 [Brachypodium
           distachyon]
          Length = 391

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/59 (45%), Positives = 40/59 (67%)
 Frame = +2

Query: 77  SRGAKMERGKATKVPKPEAERWIEVSGKLLEAKDLLGSQRFAKRAQETDPNIDGAEQIL 253
           S GA    G      + +AERW+E++ KLL A+DL+G +RFA+RA E DP + GA+++L
Sbjct: 4   SAGAGGSGGGGGSGGRAQAERWLEIAAKLLAARDLVGCKRFAERAVEADPLLPGADELL 62


>dbj|BAJ91004.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 398

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/42 (54%), Positives = 35/42 (83%)
 Frame = +2

Query: 128 EAERWIEVSGKLLEAKDLLGSQRFAKRAQETDPNIDGAEQIL 253
           +AERW+E++ KLL A+DL+G +RFA+RA E DP + GA+++L
Sbjct: 21  QAERWLEIAAKLLAARDLVGCKRFAERAVEADPLLSGADELL 62


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