BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013743
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT66765.1| Putative selenium-binding protein, related [Solan...   286   5e-75
ref|XP_002282464.1| PREDICTED: pentatricopeptide repeat-containi...   281   2e-73
emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]   278   1e-72
ref|XP_002529936.1| pentatricopeptide repeat-containing protein,...   273   4e-71
ref|XP_003532746.1| PREDICTED: pentatricopeptide repeat-containi...   264   3e-68

>gb|AAT66765.1| Putative selenium-binding protein, related [Solanum demissum]
          Length = 741

 Score =  286 bits (732), Expect = 5e-75
 Identities = 159/333 (47%), Positives = 214/333 (64%), Gaps = 3/333 (0%)
 Frame = +2

Query: 20   YSQNVNGFNGGISRGLRQNHPNGGYSTS---PQGSSLEFQGNRNESYASNVVGLVNENTV 190
            Y QN+NG N   SR   QN  +G Y+++   PQ +   +      +  S       +N  
Sbjct: 220  YQQNLNGGNSETSR---QNF-SGNYTSNGGVPQQNLSNYDPGNVRNVQSENSEKYPQNAS 275

Query: 191  GYNVQSDANYGGSFQDNTTGSYTGSVQGFNNSTNGYQGSGGFNMNTNGLPRRVGDSSTPM 370
            GYN++   N  G +     G Y  ++ GFN S+ G+Q S  +     G   +   SSTP+
Sbjct: 276  GYNMERHTNSSG-YSREMMGLYQQNLSGFNPSSAGHQASYQYQNGIVG--HQEMRSSTPV 332

Query: 371  SFGLNSRSVETDEKIQYVGTIEELDGFCKENKVKDAVEVLTVLENNGIIVDLPRYLLLMQ 550
                  +S+++D+     G+++ELD  CKE KVK+AVEVL +L+   + VDL RY++LM 
Sbjct: 333  E-----QSIDSDDSSSKKGSVDELDDLCKEGKVKEAVEVLQLLDQQHVTVDLSRYIMLMD 387

Query: 551  ICGEIRVLQYAKTVHDHLIRSLGHVNLSVHNKVLEMYSSCGSMSDAFDVFEKMNERNLTS 730
            +C E + L+ AK++H+HL+RS  H+++ ++NK+LEMY  CGSM DAF VF KM +RNLTS
Sbjct: 388  VCSEDKSLEDAKSIHEHLVRSHPHLDIKMYNKILEMYGKCGSMKDAFLVFRKMPQRNLTS 447

Query: 731  WDTMITGLAKNGSGEDAIDLFTRFKGMGLTPDGQMFVGVFLACGVLFDIDEGMLHFESMS 910
            WDTMIT L KNG GEDAI+LF  FK  G+ PDGQMF+GVF AC V+ DI EGMLHFESMS
Sbjct: 448  WDTMITWLGKNGLGEDAIELFGEFKETGMKPDGQMFLGVFHACSVVGDIVEGMLHFESMS 507

Query: 911  KVYGIVPTMEHYLSVVNMLGSTGCLEEAMEFIE 1009
            K Y I  +ME Y+ VV+MLGSTG L+EAMEFIE
Sbjct: 508  KDYDIDLSMEQYVGVVDMLGSTGYLDEAMEFIE 540


>ref|XP_002282464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g25580
            [Vitis vinifera]
          Length = 807

 Score =  281 bits (718), Expect = 2e-73
 Identities = 155/332 (46%), Positives = 208/332 (62%), Gaps = 2/332 (0%)
 Frame = +2

Query: 20   YSQNVNGFNGGISRGLRQNHPNGGYSTSPQGSSLEFQGNRNESYASNVVGLVNENTVGYN 199
            Y +N+  F         Q  P+G +  + Q    ++Q + N  Y  NV G   +N     
Sbjct: 292  YGENIRQF---------QQSPSGYHRENLQ----QYQPSENMYYRENV-GQYQQNPNVGQ 337

Query: 200  VQSDANYGGSFQDNTTGSY--TGSVQGFNNSTNGYQGSGGFNMNTNGLPRRVGDSSTPMS 373
             Q + N G   Q+     Y    +V  +  + N  Q    +  N+N     +  S    +
Sbjct: 338  YQQNPNIGQYQQNPNVAQYQQNPNVAQYQQNPNVAQ----YQTNSNEFQNSMVGSPKSSN 393

Query: 374  FGLNSRSVETDEKIQYVGTIEELDGFCKENKVKDAVEVLTVLENNGIIVDLPRYLLLMQI 553
            +  +  S+E  E  QY GT+EE+D FCK+ KVK+A+EVL +LE     VDLPRYL LM+ 
Sbjct: 394  YKPDGESLEAAESSQYSGTLEEVDDFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRLMKA 453

Query: 554  CGEIRVLQYAKTVHDHLIRSLGHVNLSVHNKVLEMYSSCGSMSDAFDVFEKMNERNLTSW 733
            CGE + LQ AK VH+ LI+S+  + +S +N++LEMYS CGSM DA+ VF+KM ERNLTSW
Sbjct: 454  CGEAKALQEAKAVHESLIKSVSPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNLTSW 513

Query: 734  DTMITGLAKNGSGEDAIDLFTRFKGMGLTPDGQMFVGVFLACGVLFDIDEGMLHFESMSK 913
            DTMIT  AKN  GE+AIDLF +FK  GL PDGQMF+GVF+AC VL D+ EGMLHF SMSK
Sbjct: 514  DTMITWFAKNDLGEEAIDLFIQFKESGLKPDGQMFIGVFMACSVLGDVIEGMLHFNSMSK 573

Query: 914  VYGIVPTMEHYLSVVNMLGSTGCLEEAMEFIE 1009
             YGIVP+M+HY S+V+MLG++G L+EA+EF+E
Sbjct: 574  DYGIVPSMKHYASMVDMLGNSGYLDEALEFVE 605


>emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]
          Length = 1148

 Score =  278 bits (711), Expect = 1e-72
 Identities = 154/332 (46%), Positives = 207/332 (62%), Gaps = 2/332 (0%)
 Frame = +2

Query: 20   YSQNVNGFNGGISRGLRQNHPNGGYSTSPQGSSLEFQGNRNESYASNVVGLVNENTVGYN 199
            Y +N+  F         Q  P+G +  + Q    ++Q + N  Y  NV G   +N     
Sbjct: 292  YGENIRQF---------QQSPSGYHRENLQ----QYQPSENMYYRENV-GQYQQNPNVGQ 337

Query: 200  VQSDANYGGSFQDNTTGSY--TGSVQGFNNSTNGYQGSGGFNMNTNGLPRRVGDSSTPMS 373
             Q + N G   Q+     Y    +V  +  + N  Q    +  N+N     +  S    +
Sbjct: 338  YQQNPNIGQYQQNPNVAQYQQNPNVAQYQQNPNVAQ----YQTNSNEFQNSMVGSPKSSN 393

Query: 374  FGLNSRSVETDEKIQYVGTIEELDGFCKENKVKDAVEVLTVLENNGIIVDLPRYLLLMQI 553
            +  +  S+E  E  QY GT+EE+D FCK+ KVK+A+EVL +LE     VDLPRYL LM+ 
Sbjct: 394  YKPDGESLEAAESSQYSGTLEEVDDFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRLMKA 453

Query: 554  CGEIRVLQYAKTVHDHLIRSLGHVNLSVHNKVLEMYSSCGSMSDAFDVFEKMNERNLTSW 733
            CGE + LQ AK VH+ LI+S+  + +S +N++LEMYS CGSM DA+ VF+KM ERNLTSW
Sbjct: 454  CGEAKALQEAKAVHESLIKSVSPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNLTSW 513

Query: 734  DTMITGLAKNGSGEDAIDLFTRFKGMGLTPDGQMFVGVFLACGVLFDIDEGMLHFESMSK 913
            DTMIT  AKN  GE+AIDLF +FK  GL PD QMF+GVF+AC VL D+ EGMLHF SMSK
Sbjct: 514  DTMITWFAKNDLGEEAIDLFIQFKESGLKPDXQMFIGVFMACSVLGDVIEGMLHFNSMSK 573

Query: 914  VYGIVPTMEHYLSVVNMLGSTGCLEEAMEFIE 1009
             YGIVP+M+HY S+V+MLG++G L+EA+EF+E
Sbjct: 574  DYGIVPSMKHYASMVDMLGNSGYLDEALEFVE 605


>ref|XP_002529936.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223530566|gb|EEF32444.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 548

 Score =  273 bits (699), Expect = 4e-71
 Identities = 156/354 (44%), Positives = 214/354 (60%), Gaps = 22/354 (6%)
 Frame = +2

Query: 14   NEYSQNVNGFNGGISRGLRQNHPNGGYSTSPQGSSLEFQGNRNESYASNVVGLV--NENT 187
            +++ QN   F+G +       +PN G+  +   +      N N +Y +N V  +  ++N+
Sbjct: 57   DDHFQNPVNFDGNVL------NPNWGFRET---TGNVIGSNNNHNYNNNQVSQIGNSQNS 107

Query: 188  VGYNVQSDANYGGSFQDNTTGSYTGSVQGFNNSTNGYQGSGGFNMNTNGLPRRVGDSSTP 367
             GY      N+ GS++++   +YT  V         Y G+ G    + G   +   + + 
Sbjct: 108  GGYQ-----NFSGSYRESWNNNYTQHVNQLPPPY--YAGNVGMYPPSYGAAAQYQQNLSV 160

Query: 368  MSFGL------------------NSRSVETD--EKIQYVGTIEELDGFCKENKVKDAVEV 487
            ++ G                   N+  VE D  E   Y GT+EELD  CKE KVK+AVEV
Sbjct: 161  VNAGQYMSNSNDVQNVMVASGVSNNPKVEDDLAESSSYRGTLEELDELCKEKKVKEAVEV 220

Query: 488  LTVLENNGIIVDLPRYLLLMQICGEIRVLQYAKTVHDHLIRSLGHVNLSVHNKVLEMYSS 667
            L +LE   ++VDLPR+L LM+ICGE +  + AK VHDHL+R    + +S  NK+LEMY  
Sbjct: 221  LNLLEERRVLVDLPRFLQLMRICGEAKASEEAKVVHDHLVRLQSPLAVSTFNKILEMYGK 280

Query: 668  CGSMSDAFDVFEKMNERNLTSWDTMITGLAKNGSGEDAIDLFTRFKGMGLTPDGQMFVGV 847
            CG M  AF VF KM +RNLT+WDTMI  LAKNG GEDAIDLF++FK  GL PD Q+F+GV
Sbjct: 281  CGDMDSAFAVFNKMPKRNLTTWDTMIAWLAKNGLGEDAIDLFSQFKQAGLVPDAQLFIGV 340

Query: 848  FLACGVLFDIDEGMLHFESMSKVYGIVPTMEHYLSVVNMLGSTGCLEEAMEFIE 1009
            F ACGV+ D+ EGMLHFESM K YGIVP+MEH++S+V+MLG+ G L+EA+EFIE
Sbjct: 341  FSACGVVGDVIEGMLHFESMKKDYGIVPSMEHFVSIVDMLGTIGHLDEALEFIE 394


>ref|XP_003532746.1| PREDICTED: pentatricopeptide repeat-containing protein At2g25580-like
            [Glycine max]
          Length = 664

 Score =  264 bits (674), Expect = 3e-68
 Identities = 149/316 (47%), Positives = 189/316 (59%)
 Frame = +2

Query: 62   GLRQNHPNGGYSTSPQGSSLEFQGNRNESYASNVVGLVNENTVGYNVQSDANYGGSFQDN 241
            G     PN   S  P    LE QGN          G +N+N   +    + +Y GS +  
Sbjct: 166  GQGMQSPNAYSSPGP----LESQGNLR--------GDLNQNIDHFQQPQNVHYKGSHEMR 213

Query: 242  TTGSYTGSVQGFNNSTNGYQGSGGFNMNTNGLPRRVGDSSTPMSFGLNSRSVETDEKIQY 421
                      G+  S    +  G +  N N   R V  S    +   +  S +      Y
Sbjct: 214  P------QYPGYGQSQQSLK-DGQYLPNLNTAQRSVVGSHLSSNANPDGESAKASNDSPY 266

Query: 422  VGTIEELDGFCKENKVKDAVEVLTVLENNGIIVDLPRYLLLMQICGEIRVLQYAKTVHDH 601
             GT+EELD FC E  VK+AVEVL +LE   I VDLPRYL LM  CGE + L+ AK VH H
Sbjct: 267  RGTLEELDNFCIEGNVKEAVEVLELLEKLDIPVDLPRYLQLMHQCGENKSLEEAKNVHRH 326

Query: 602  LIRSLGHVNLSVHNKVLEMYSSCGSMSDAFDVFEKMNERNLTSWDTMITGLAKNGSGEDA 781
             ++ L  + +S +N++LEMY  CGS+ DA ++F  M ERNLT+WDTMIT LAKNG  ED+
Sbjct: 327  ALQHLSPLQVSTYNRILEMYLECGSVDDALNIFNNMPERNLTTWDTMITQLAKNGFAEDS 386

Query: 782  IDLFTRFKGMGLTPDGQMFVGVFLACGVLFDIDEGMLHFESMSKVYGIVPTMEHYLSVVN 961
            IDLFT+FK +GL PDGQMF+GV  ACG+L DIDEGM HFESM+K YGIVP+M H++SVV+
Sbjct: 387  IDLFTQFKNLGLKPDGQMFIGVLFACGMLGDIDEGMQHFESMNKDYGIVPSMTHFVSVVD 446

Query: 962  MLGSTGCLEEAMEFIE 1009
            M+GS G L+EA EFIE
Sbjct: 447  MIGSIGHLDEAFEFIE 462