BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013741
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subu...   176   2e-42
emb|CBI17841.3| unnamed protein product [Vitis vinifera]              176   2e-42
ref|XP_004146319.1| PREDICTED: replication protein A 32 kDa subu...   169   3e-40
emb|CAJ13715.1| putative replication factor A [Capsicum chinense]     160   1e-37
ref|XP_003541521.1| PREDICTED: replication factor A protein 2-li...   158   5e-37

>ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
          Length = 275

 Score =  176 bits (445), Expect = 2e-42
 Identities = 88/142 (61%), Positives = 108/142 (76%)
 Frame = -2

Query: 426 SQFDGNAAFSGGGFMPSQSLQSTDPGYSSSSKNRDSQVLLPLTVKQIKDASNPNDEKSXX 247
           SQFDGNAAFSGGGFMPSQ+ Q+ +PG+S + +NRD+Q LLPLTVKQI +A   +D+KS  
Sbjct: 5   SQFDGNAAFSGGGFMPSQATQAAEPGFSPA-RNRDTQALLPLTVKQISEAFLSSDDKSNF 63

Query: 246 XXXXXXXXXIKLVGMVSDRVERATDVSFSIDDGTGRLVCHRWLNESIDSKEMEEIQDGMY 67
                    + LVGMV ++ ER TDV F +DDGTGR+ C+RW+NE++D+KEME I DGMY
Sbjct: 64  LIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILDGMY 123

Query: 66  VRVHGALKVFQGKIQLNTFSIR 1
           VRVHG LK FQGK  LN FSIR
Sbjct: 124 VRVHGHLKGFQGKRHLNVFSIR 145


>emb|CBI17841.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  176 bits (445), Expect = 2e-42
 Identities = 88/142 (61%), Positives = 108/142 (76%)
 Frame = -2

Query: 426 SQFDGNAAFSGGGFMPSQSLQSTDPGYSSSSKNRDSQVLLPLTVKQIKDASNPNDEKSXX 247
           SQFDGNAAFSGGGFMPSQ+ Q+ +PG+S + +NRD+Q LLPLTVKQI +A   +D+KS  
Sbjct: 5   SQFDGNAAFSGGGFMPSQATQAAEPGFSPA-RNRDTQALLPLTVKQISEAFLSSDDKSNF 63

Query: 246 XXXXXXXXXIKLVGMVSDRVERATDVSFSIDDGTGRLVCHRWLNESIDSKEMEEIQDGMY 67
                    + LVGMV ++ ER TDV F +DDGTGR+ C+RW+NE++D+KEME I DGMY
Sbjct: 64  LIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILDGMY 123

Query: 66  VRVHGALKVFQGKIQLNTFSIR 1
           VRVHG LK FQGK  LN FSIR
Sbjct: 124 VRVHGHLKGFQGKRHLNVFSIR 145


>ref|XP_004146319.1| PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis
           sativus] gi|449500253|ref|XP_004161048.1| PREDICTED:
           replication protein A 32 kDa subunit B-like [Cucumis
           sativus]
          Length = 277

 Score =  169 bits (427), Expect = 3e-40
 Identities = 88/142 (61%), Positives = 104/142 (73%)
 Frame = -2

Query: 426 SQFDGNAAFSGGGFMPSQSLQSTDPGYSSSSKNRDSQVLLPLTVKQIKDASNPNDEKSXX 247
           SQFDGNAAFSGGGFMPSQ+ Q+ D  +S + KNRD Q LLPLTVKQI DA   +D+KS  
Sbjct: 4   SQFDGNAAFSGGGFMPSQTTQAPDHSFSPA-KNRDVQALLPLTVKQINDAFLSSDDKSNF 62

Query: 246 XXXXXXXXXIKLVGMVSDRVERATDVSFSIDDGTGRLVCHRWLNESIDSKEMEEIQDGMY 67
                    +KLVGMV +R  R TDV+F++DDGTGR+ C +W+NE+ DS E+E I DGMY
Sbjct: 63  VIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMY 122

Query: 66  VRVHGALKVFQGKIQLNTFSIR 1
           VRVHG LK FQGK  LN FSIR
Sbjct: 123 VRVHGHLKSFQGKRTLNVFSIR 144


>emb|CAJ13715.1| putative replication factor A [Capsicum chinense]
          Length = 299

 Score =  160 bits (405), Expect = 1e-37
 Identities = 79/142 (55%), Positives = 103/142 (72%)
 Frame = -2

Query: 426 SQFDGNAAFSGGGFMPSQSLQSTDPGYSSSSKNRDSQVLLPLTVKQIKDASNPNDEKSXX 247
           +QFDGNAAFSGGGFMPSQ+ Q+      S +KNRDSQ L+PLTVKQI +A   +D+K+  
Sbjct: 25  NQFDGNAAFSGGGFMPSQATQTASDHSFSPTKNRDSQTLIPLTVKQISEAFQSSDDKTNF 84

Query: 246 XXXXXXXXXIKLVGMVSDRVERATDVSFSIDDGTGRLVCHRWLNESIDSKEMEEIQDGMY 67
                    +KLVG++ ++ E  T VSF +DDGTGRL C RW+NE++D+KEME + +G+Y
Sbjct: 85  LIDGVDVNNVKLVGILFNKAEMLTAVSFVVDDGTGRLDCFRWVNEAVDTKEMEALTNGIY 144

Query: 66  VRVHGALKVFQGKIQLNTFSIR 1
           VRVHG LK FQGK QL  +S+R
Sbjct: 145 VRVHGHLKGFQGKKQLMAYSVR 166


>ref|XP_003541521.1| PREDICTED: replication factor A protein 2-like [Glycine max]
          Length = 277

 Score =  158 bits (399), Expect = 5e-37
 Identities = 81/142 (57%), Positives = 100/142 (70%)
 Frame = -2

Query: 426 SQFDGNAAFSGGGFMPSQSLQSTDPGYSSSSKNRDSQVLLPLTVKQIKDASNPNDEKSXX 247
           SQFDGNAAFSGGGFMPSQ+ Q  D  +  S KNRD+Q LLPLTVKQI DAS  +D+K   
Sbjct: 6   SQFDGNAAFSGGGFMPSQTTQGPDSSFVPS-KNRDAQSLLPLTVKQIYDASQSSDDKINL 64

Query: 246 XXXXXXXXXIKLVGMVSDRVERATDVSFSIDDGTGRLVCHRWLNESIDSKEMEEIQDGMY 67
                    + LVG VS++  R TDV+F +DDGTGR+ C++WL+E++D+ E E I +GMY
Sbjct: 65  IIDGVDVTNVTLVGRVSNKAGRITDVTFVLDDGTGRIECNKWLHEAVDTNEAEAILEGMY 124

Query: 66  VRVHGALKVFQGKIQLNTFSIR 1
            R+HG LK FQGK  LN FS R
Sbjct: 125 ARLHGQLKHFQGKRTLNVFSFR 146