BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013725
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    86   3e-15
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    85   5e-15
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    78   8e-13
ref|XP_002528337.1| conserved hypothetical protein [Ricinus comm...    74   2e-11

>ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|222848975|gb|EEE86522.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
 Frame = +1

Query: 1   LDFSKSKWVEAEDIGDHAFFVGSNNSFSVIALDFPGCRENCIYFADDDGQYIST----GG 168
           +DF K  WV    + D A FVG N+S SV+  D PGC +N +YF DD  + ++     GG
Sbjct: 367 MDFDKETWVSMTSLDDQAVFVGGNHSASVLTCDLPGCEKNSVYFTDDYWERMNEDYLYGG 426

Query: 169 HDNGIFNLKDGSIEAICPVDAKYVCPRPMWYSPN 270
           HD G+FNLKD S++    +DA  + P P W+ PN
Sbjct: 427 HDMGVFNLKDKSVKHFYQLDALKIQPPPCWFLPN 460


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
 Frame = +1

Query: 1   LDFSKSKWVEAEDIGDHAFFVGSNNSFSVIALDFPGCRENCIYFADD--DGQYISTGG-H 171
           LD    +W     +GD A F+G N S S+ ++DFPGC+ NCIY+ DD  +  Y   GG  
Sbjct: 295 LDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQ 354

Query: 172 DNGIFNLKDGSIEAICPVDAKYVCPRPMWYSPNIC 276
           D GIFNL+DGSIE +     +   P P+W +PN C
Sbjct: 355 DLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPNPC 389


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
 Frame = +1

Query: 1   LDFSKSKWVEAEDIGDHAFFVGSNNSFSVIALDFPGCRENCIYFADD--DGQYISTGG-H 171
           LD    +W     +GD A F+G N S S+ ++DFPGC+ NCIY+ DD  +  Y   GG  
Sbjct: 295 LDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQ 354

Query: 172 DNGIFNLKDGSIEAICPVDAKYVCPRPMWYSPNIC 276
           D GIFNL+DGSIE +     +   P P+W +PN C
Sbjct: 355 DLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPNPC 389


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
 Frame = +1

Query: 1   LDFSKSKWVEAEDIGDHAFFVGSNNSFSVIALDFPGCRENCIYFADD------DGQYIST 162
           LD++  +W+    +GD A F+G N+S S+ A DF GC  NCIY+ DD      DG +   
Sbjct: 300 LDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHF--- 356

Query: 163 GGHDNGIFNLKDGSIEAICPVDAKYVCP----RPMWYSPNIC 276
           G HD GIF L D +IE +      +  P     P+W SPN C
Sbjct: 357 GDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPNPC 398


>ref|XP_002528337.1| conserved hypothetical protein [Ricinus communis]
           gi|223532205|gb|EEF34009.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 102

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
 Frame = +1

Query: 1   LDFSKSKWVEAEDIGDHAFFVGSNNSFSVIALDFPGCRENCIYFADDD----GQYISTGG 168
           LD S+  WVE E + +   F+G N+S S+ A DF GC  N IYF DD+     +  S GG
Sbjct: 7   LDSSEQNWVEVESLNNQVLFLGMNHSMSLSAQDFSGCDRNSIYFTDDNLYQMYEDYSYGG 66

Query: 169 HDNGIFNLKDGSIEAICPVDAKYVCPRPMWYSPN 270
           HD G F+L+D  ++       + V P P+W  PN
Sbjct: 67  HDFGKFSLEDKVVKLFNGHKIEKVDPSPLWIVPN 100