BLASTX nr result

ID: Coptis25_contig00013721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013721
         (1165 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278704.1| PREDICTED: uncharacterized protein LOC100247...   326   6e-87
emb|CBI26577.3| unnamed protein product [Vitis vinifera]              325   1e-86
ref|XP_002519986.1| conserved hypothetical protein [Ricinus comm...   295   1e-77
ref|XP_002886801.1| hypothetical protein ARALYDRAFT_315473 [Arab...   288   2e-75
ref|XP_002305632.1| predicted protein [Populus trichocarpa] gi|2...   286   5e-75

>ref|XP_002278704.1| PREDICTED: uncharacterized protein LOC100247606 [Vitis vinifera]
          Length = 244

 Score =  326 bits (836), Expect = 6e-87
 Identities = 154/221 (69%), Positives = 183/221 (82%)
 Frame = +3

Query: 129 RRHVSTQTQAFRRSDLDGFAKKVASGEVWKDAWRSANDGFEQLVYDAKKAAERIDRQYSV 308
           R  +    +AFRRSD DGFAK++ASG+ W+DAWRSANDGFE L+++AKK AERI+RQY+V
Sbjct: 26  RHRLPMPVRAFRRSDFDGFAKRMASGDAWRDAWRSANDGFELLIFEAKKTAERINRQYAV 85

Query: 309 SRRVSEVAQTAKYKARELDREYEIGQKWKSFSLDFSRNLPGYRKQLNDSLSTPLGRSFAT 488
           SRR SE   +A   ARE+DRE+EIG++W++ +LDF RN P YRKQLND L TPLGRSFAT
Sbjct: 86  SRRFSEAVGSAGDWAREVDREFEIGRRWRTVTLDFGRNWPRYRKQLNDFLDTPLGRSFAT 145

Query: 489 IFFLWFALSGWLFRILFFATWVLPFAAPLLIRTIANNFVIEGACPACKKRFVGYKNQTIN 668
           IFFLWFALSGWLFR L FATWVLPFA PLLI T ANNFVI+G CPAC+++F+GYKNQ + 
Sbjct: 146 IFFLWFALSGWLFRFLIFATWVLPFAGPLLIGTFANNFVIKGNCPACRRQFIGYKNQIVR 205

Query: 669 CTSCGSTVWQPKGDFFTRGGKGTPPSSTSQSDIIDVEFEEK 791
           C  CG+ VWQPKGD  +RG +GTPPSS SQS+IIDVEFEEK
Sbjct: 206 CAGCGNIVWQPKGD-VSRGSRGTPPSS-SQSEIIDVEFEEK 244


>emb|CBI26577.3| unnamed protein product [Vitis vinifera]
          Length = 214

 Score =  325 bits (833), Expect = 1e-86
 Identities = 153/213 (71%), Positives = 181/213 (84%)
 Frame = +3

Query: 153 QAFRRSDLDGFAKKVASGEVWKDAWRSANDGFEQLVYDAKKAAERIDRQYSVSRRVSEVA 332
           +AFRRSD DGFAK++ASG+ W+DAWRSANDGFE L+++AKK AERI+RQY+VSRR SE  
Sbjct: 4   RAFRRSDFDGFAKRMASGDAWRDAWRSANDGFELLIFEAKKTAERINRQYAVSRRFSEAV 63

Query: 333 QTAKYKARELDREYEIGQKWKSFSLDFSRNLPGYRKQLNDSLSTPLGRSFATIFFLWFAL 512
            +A   ARE+DRE+EIG++W++ +LDF RN P YRKQLND L TPLGRSFATIFFLWFAL
Sbjct: 64  GSAGDWAREVDREFEIGRRWRTVTLDFGRNWPRYRKQLNDFLDTPLGRSFATIFFLWFAL 123

Query: 513 SGWLFRILFFATWVLPFAAPLLIRTIANNFVIEGACPACKKRFVGYKNQTINCTSCGSTV 692
           SGWLFR L FATWVLPFA PLLI T ANNFVI+G CPAC+++F+GYKNQ + C  CG+ V
Sbjct: 124 SGWLFRFLIFATWVLPFAGPLLIGTFANNFVIKGNCPACRRQFIGYKNQIVRCAGCGNIV 183

Query: 693 WQPKGDFFTRGGKGTPPSSTSQSDIIDVEFEEK 791
           WQPKGD  +RG +GTPPSS SQS+IIDVEFEEK
Sbjct: 184 WQPKGD-VSRGSRGTPPSS-SQSEIIDVEFEEK 214


>ref|XP_002519986.1| conserved hypothetical protein [Ricinus communis]
           gi|223540750|gb|EEF42310.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 231

 Score =  295 bits (755), Expect = 1e-77
 Identities = 150/223 (67%), Positives = 177/223 (79%)
 Frame = +3

Query: 123 ATRRHVSTQTQAFRRSDLDGFAKKVASGEVWKDAWRSANDGFEQLVYDAKKAAERIDRQY 302
           A  RHV T  +AF+R D D  A+         +AWRSANDGFEQL+Y+A+KAAERIDR+Y
Sbjct: 22  AAFRHVGT-VRAFQRGDFDRLAR---------NAWRSANDGFEQLMYEARKAAERIDRRY 71

Query: 303 SVSRRVSEVAQTAKYKARELDREYEIGQKWKSFSLDFSRNLPGYRKQLNDSLSTPLGRSF 482
           SVSRRVS+VAQ+A  +ARE+DRE EIG +W++F++DFSRN P YR+QLND L TPLGR F
Sbjct: 72  SVSRRVSDVAQSAAERAREIDRELEIGVRWRTFTVDFSRNWPRYRRQLNDFLDTPLGRGF 131

Query: 483 ATIFFLWFALSGWLFRILFFATWVLPFAAPLLIRTIANNFVIEGACPACKKRFVGYKNQT 662
           ATIFFLWFALSGWLFRIL FATWVLPFAAPLLI T+ANN VI+GACPACK++FVGYK+Q 
Sbjct: 132 ATIFFLWFALSGWLFRILIFATWVLPFAAPLLIGTVANNLVIKGACPACKRQFVGYKSQV 191

Query: 663 INCTSCGSTVWQPKGDFFTRGGKGTPPSSTSQSDIIDVEFEEK 791
           I C  CG+ VWQP  D     G+GT  SS S ++IIDVEFEEK
Sbjct: 192 IRCAGCGNIVWQP--DSRDGRGRGT-SSSKSDTNIIDVEFEEK 231


>ref|XP_002886801.1| hypothetical protein ARALYDRAFT_315473 [Arabidopsis lyrata subsp.
           lyrata] gi|297332642|gb|EFH63060.1| hypothetical protein
           ARALYDRAFT_315473 [Arabidopsis lyrata subsp. lyrata]
          Length = 247

 Score =  288 bits (737), Expect = 2e-75
 Identities = 137/228 (60%), Positives = 168/228 (73%), Gaps = 4/228 (1%)
 Frame = +3

Query: 120 FATRRHVSTQTQAFRRSDLDGFAKKVASGEVWKDAWRSANDGFEQLVYDAKKAAERIDRQ 299
           + +R     Q +AF+R D D FA  V SG+ W+DAWRSANDGFEQ V++AKK AERIDRQ
Sbjct: 20  YTSRAASFLQVKAFQRGDFDRFADNVKSGKAWRDAWRSANDGFEQFVFEAKKTAERIDRQ 79

Query: 300 YSVSRRVSEVAQTAKYKARELDREYEIGQKWKSFSLDFSRNLPGYRKQLNDSLSTPLGRS 479
           Y+VSRR S  A +A  +ARE+DRE+ I  + +SFS D SRN P YRKQ +  L+TPLG S
Sbjct: 80  YAVSRRFSSAASSAGDRAREIDREFGISPRVRSFSADLSRNFPKYRKQFSAFLNTPLGGS 139

Query: 480 FATIFFLWFALSGWLFRILFFATWVLPFAAPLLIRTIANNFVIEGACPACKKRFVGYKNQ 659
           FATIFFLWFALSGWLFR++  ATWVLP A PLLI  +ANNFVI+G CPACK++F+GYK+Q
Sbjct: 140 FATIFFLWFALSGWLFRVIIIATWVLPIAGPLLIGAVANNFVIKGECPACKRQFIGYKSQ 199

Query: 660 TINCTSCGSTVWQPKGDFFTRGGKGTPPSSTS----QSDIIDVEFEEK 791
            I C  CG+ VWQP+GDFF++ G        S    +S IIDV+FEEK
Sbjct: 200 IIRCEGCGNIVWQPQGDFFSKDGNNNNSKGNSKKPPKSQIIDVDFEEK 247


>ref|XP_002305632.1| predicted protein [Populus trichocarpa] gi|222848596|gb|EEE86143.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score =  286 bits (733), Expect = 5e-75
 Identities = 142/225 (63%), Positives = 172/225 (76%), Gaps = 8/225 (3%)
 Frame = +3

Query: 141 STQTQAFRRSDLDGFAKKVASGEVWKDAWRSANDGFEQLVYDAKKAAERIDRQYSVSRRV 320
           S +  AFRR D D FAK         DAWR+ANDGFEQ +++AKK AERIDR+YSVSRR+
Sbjct: 46  SGKALAFRR-DFDRFAK---------DAWRTANDGFEQFLFEAKKTAERIDRRYSVSRRL 95

Query: 321 SEVAQTAKYKARELDREYEIGQKWKSFSLDFSRNLPGYRKQLNDSLSTPLGRSFATIFFL 500
           S VAQ+A  +ARE+DREY+I  +W++FS+DF+RN P YRKQ+ND  +TP+GRSF TIFFL
Sbjct: 96  SAVAQSASDRAREIDREYDISLRWRTFSMDFNRNWPRYRKQINDFFNTPIGRSFVTIFFL 155

Query: 501 WFALSGWLFRILFFATWVLPFAAPLLIRTIANNFVIEGACPACKKRFVGYKNQTINCTSC 680
           WFALSGW+FR+   ATWVLP A PLLI T+ANN VI+GACPACK++FVGYKNQ I C  C
Sbjct: 156 WFALSGWMFRLFIIATWVLPIAGPLLIGTLANNLVIKGACPACKRQFVGYKNQVIRCGGC 215

Query: 681 GSTVWQPK--------GDFFTRGGKGTPPSSTSQSDIIDVEFEEK 791
           G+ VWQPK        GDFF+ GG+GT  SS S  +IIDV+FEEK
Sbjct: 216 GNIVWQPKGGFPGRGPGDFFSGGGRGT-RSSKSDPEIIDVDFEEK 259


Top