BLASTX nr result

ID: Coptis25_contig00013708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013708
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276751.1| PREDICTED: eukaryotic translation initiation...   366   5e-99
emb|CBI25434.3| unnamed protein product [Vitis vinifera]              365   2e-98
ref|XP_002275312.1| PREDICTED: eukaryotic translation initiation...   359   6e-97
ref|XP_004139813.1| PREDICTED: eukaryotic translation initiation...   357   2e-96
ref|XP_003538479.1| PREDICTED: eukaryotic translation initiation...   353   6e-95

>ref|XP_002276751.1| PREDICTED: eukaryotic translation initiation factor 2 subunit alpha
            [Vitis vinifera]
          Length = 344

 Score =  366 bits (940), Expect = 5e-99
 Identities = 181/230 (78%), Positives = 196/230 (85%)
 Frame = -3

Query: 1166 IMRHVAETLHLDLEDLYLHVGWPLYRKYGHAFEAFKLVVNDPDSILNTLTREVKEVGPDG 987
            IMRHVAET+ LDLEDLY+HVGWPLYRKYGHAFEAFK++V DPDS+LN+LTREVKEVGPDG
Sbjct: 115  IMRHVAETMQLDLEDLYIHVGWPLYRKYGHAFEAFKIIVTDPDSVLNSLTREVKEVGPDG 174

Query: 986  QEVAKVVPALSEDVKDALIKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAA 807
            QEV KVVPA+SE+VKDAL+KNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAA
Sbjct: 175  QEVTKVVPAISEEVKDALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAA 234

Query: 806  GNSDCPVKIKLVAPPLYVLTTQTLDKEQGMLVLTSAIKACTEAIDKHKGKLVVKEAPRAV 627
            GN DCPVKIKLVAPPLYVLTTQTLDKEQGM +L +AI ACTE ID HKGKL+VKEAPRAV
Sbjct: 235  GNKDCPVKIKLVAPPLYVLTTQTLDKEQGMSILNNAIAACTEEIDCHKGKLIVKEAPRAV 294

Query: 626  SERDDKLLQEHMANLRHANXXXXXXXXXXXXXXXXXXEIDLENSPAGLQD 477
            SERDDKLL EHMA L H N                  +ID+ENS  G+ D
Sbjct: 295  SERDDKLLAEHMAKLSHQNEEISGDEGSEEEEDTGLGDIDVENSGPGITD 344


>emb|CBI25434.3| unnamed protein product [Vitis vinifera]
          Length = 229

 Score =  365 bits (936), Expect = 2e-98
 Identities = 180/229 (78%), Positives = 195/229 (85%)
 Frame = -3

Query: 1163 MRHVAETLHLDLEDLYLHVGWPLYRKYGHAFEAFKLVVNDPDSILNTLTREVKEVGPDGQ 984
            MRHVAET+ LDLEDLY+HVGWPLYRKYGHAFEAFK++V DPDS+LN+LTREVKEVGPDGQ
Sbjct: 1    MRHVAETMQLDLEDLYIHVGWPLYRKYGHAFEAFKIIVTDPDSVLNSLTREVKEVGPDGQ 60

Query: 983  EVAKVVPALSEDVKDALIKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAG 804
            EV KVVPA+SE+VKDAL+KNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAG
Sbjct: 61   EVTKVVPAISEEVKDALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAG 120

Query: 803  NSDCPVKIKLVAPPLYVLTTQTLDKEQGMLVLTSAIKACTEAIDKHKGKLVVKEAPRAVS 624
            N DCPVKIKLVAPPLYVLTTQTLDKEQGM +L +AI ACTE ID HKGKL+VKEAPRAVS
Sbjct: 121  NKDCPVKIKLVAPPLYVLTTQTLDKEQGMSILNNAIAACTEEIDCHKGKLIVKEAPRAVS 180

Query: 623  ERDDKLLQEHMANLRHANXXXXXXXXXXXXXXXXXXEIDLENSPAGLQD 477
            ERDDKLL EHMA L H N                  +ID+ENS  G+ D
Sbjct: 181  ERDDKLLAEHMAKLSHQNEEISGDEGSEEEEDTGLGDIDVENSGPGITD 229


>ref|XP_002275312.1| PREDICTED: eukaryotic translation initiation factor 2 subunit alpha
            [Vitis vinifera] gi|297745848|emb|CBI15904.3| unnamed
            protein product [Vitis vinifera]
          Length = 344

 Score =  359 bits (922), Expect = 6e-97
 Identities = 176/230 (76%), Positives = 197/230 (85%)
 Frame = -3

Query: 1166 IMRHVAETLHLDLEDLYLHVGWPLYRKYGHAFEAFKLVVNDPDSILNTLTREVKEVGPDG 987
            IMRHVAET++LDLEDLY+HVGWPLYRKY HAFEAFKL+V DPDS+LN+LTRE+KE+GPDG
Sbjct: 115  IMRHVAETMNLDLEDLYIHVGWPLYRKYAHAFEAFKLIVTDPDSVLNSLTREIKEIGPDG 174

Query: 986  QEVAKVVPALSEDVKDALIKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAA 807
            QEV KV+PA+SE+VKD+LIKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAA
Sbjct: 175  QEVTKVIPAMSEEVKDSLIKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAA 234

Query: 806  GNSDCPVKIKLVAPPLYVLTTQTLDKEQGMLVLTSAIKACTEAIDKHKGKLVVKEAPRAV 627
            GN DCPVKIKLVAPPLYVLTTQTLDKEQGML+L +AI ACT+ I++HKGKL+VKEAPRAV
Sbjct: 235  GNKDCPVKIKLVAPPLYVLTTQTLDKEQGMLILNNAITACTKEIEQHKGKLIVKEAPRAV 294

Query: 626  SERDDKLLQEHMANLRHANXXXXXXXXXXXXXXXXXXEIDLENSPAGLQD 477
            SERDDKLL EHMA LR  N                  + DLE+S  GL +
Sbjct: 295  SERDDKLLAEHMAKLRQDNEEVSGDEGEEEEEDTGMGDADLESSGPGLTE 344


>ref|XP_004139813.1| PREDICTED: eukaryotic translation initiation factor 2 subunit
            alpha-like [Cucumis sativus]
            gi|449492599|ref|XP_004159044.1| PREDICTED: eukaryotic
            translation initiation factor 2 subunit alpha-like
            [Cucumis sativus]
          Length = 344

 Score =  357 bits (917), Expect = 2e-96
 Identities = 176/230 (76%), Positives = 194/230 (84%)
 Frame = -3

Query: 1166 IMRHVAETLHLDLEDLYLHVGWPLYRKYGHAFEAFKLVVNDPDSILNTLTREVKEVGPDG 987
            IMRHVAET+++DLEDLY+HVGWPLYRKYGHAFEAFK++V DPDS+LN+LTREVKE GPDG
Sbjct: 115  IMRHVAETMNIDLEDLYIHVGWPLYRKYGHAFEAFKIIVTDPDSVLNSLTREVKEAGPDG 174

Query: 986  QEVAKVVPALSEDVKDALIKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAA 807
            QE  K+VPA+SEDVKDALIKNIRRRMTPQPLK+RADIEMKCFQFDGVLHIKEAMRKAEAA
Sbjct: 175  QEETKIVPAMSEDVKDALIKNIRRRMTPQPLKVRADIEMKCFQFDGVLHIKEAMRKAEAA 234

Query: 806  GNSDCPVKIKLVAPPLYVLTTQTLDKEQGMLVLTSAIKACTEAIDKHKGKLVVKEAPRAV 627
            GN DCPVKIKLVAPPLYVLTTQTLDKEQG+ VL  AI ACTEAI+ HKGKLVVKE PRAV
Sbjct: 235  GNDDCPVKIKLVAPPLYVLTTQTLDKEQGITVLEKAIAACTEAIEHHKGKLVVKETPRAV 294

Query: 626  SERDDKLLQEHMANLRHANXXXXXXXXXXXXXXXXXXEIDLENSPAGLQD 477
            SERDDKLL EHMA LR  N                  E+D+EN+  G+ +
Sbjct: 295  SERDDKLLAEHMAKLRQDNEEISGDEDSEEEEDTGMGEVDVENAGPGITE 344


>ref|XP_003538479.1| PREDICTED: eukaryotic translation initiation factor 2 subunit
            alpha-like [Glycine max]
          Length = 340

 Score =  353 bits (905), Expect = 6e-95
 Identities = 175/230 (76%), Positives = 198/230 (86%)
 Frame = -3

Query: 1166 IMRHVAETLHLDLEDLYLHVGWPLYRKYGHAFEAFKLVVNDPDSILNTLTREVKEVGPDG 987
            IMRHVAETL++DLE+LY+H+GWPLYRKYGHAFEAFK++V DPD++L+TLTREVKEVGPDG
Sbjct: 112  IMRHVAETLNIDLEELYIHIGWPLYRKYGHAFEAFKIIVTDPDTVLSTLTREVKEVGPDG 171

Query: 986  QEVAKVVPALSEDVKDALIKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAA 807
            QEV KVVPA+SE+VKD+L+KNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAM KAEAA
Sbjct: 172  QEVTKVVPAVSEEVKDSLVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMHKAEAA 231

Query: 806  GNSDCPVKIKLVAPPLYVLTTQTLDKEQGMLVLTSAIKACTEAIDKHKGKLVVKEAPRAV 627
            GN DCPVKIKLVAPPLYVLTTQTLDKEQG+LVL +AI +CTEAI++HKGKLVVKEA RAV
Sbjct: 232  GNDDCPVKIKLVAPPLYVLTTQTLDKEQGILVLNNAIASCTEAIEQHKGKLVVKEAARAV 291

Query: 626  SERDDKLLQEHMANLRHANXXXXXXXXXXXXXXXXXXEIDLENSPAGLQD 477
            SERDDKLL EHMA LR  N                  E+D++N  AG+ D
Sbjct: 292  SERDDKLLAEHMAKLRQDNEEVSGDEDSEEEEDTGMGEVDVDNG-AGITD 340


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