BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013689
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299005.1| predicted protein [Populus trichocarpa] gi|2...    82   2e-13
ref|XP_003629127.1| F-box family protein [Medicago truncatula] g...    81   5e-13
ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|2...    78   4e-12
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...    76   1e-11
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    72   2e-10

>ref|XP_002299005.1| predicted protein [Populus trichocarpa] gi|222846263|gb|EEE83810.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 5/185 (2%)
 Frame = -1

Query: 540 LPSDIILNILCRVPLKDLISQCSLVCKTWYNLARHPRFAETHYRWVIQNRCSPCVVLCI- 364
           +P DI+  IL ++P K L+ +   VCKTW +L R P F + H    +   C   +++   
Sbjct: 33  IPQDIVAEILAKLPAKSLM-RFRCVCKTWSSLIRDPFFVKLHQNQSLNKPCKTGLLMSTK 91

Query: 363 --LFEGVFGFIDHQVFDNLDTSAPVHFLDFLDEPTFQPKLYIIGFANGLLCLSEDPLLCD 190
             LF   F F DH+    L+           D  +      ++G ANGL C+  D     
Sbjct: 92  HQLFNSHFVFADHEGKQALEE----------DTISIPKSSNVLGIANGLACIVND----K 137

Query: 189 YPVFYYICNPITGEHITL-PRPHRLEIVQLSAFVFDSSTSEYKVIRF-YHGRNGGEVFTL 16
           + +  Y  N  T E  T+ P P  + I    +F FD   +EYK+++F  H +   E+FTL
Sbjct: 138 HRISVY--NLSTRESTTIPPPPQEIRIQDRLSFGFDPLANEYKIVKFCAHDKEQFEIFTL 195

Query: 15  GSSRW 1
           G+ RW
Sbjct: 196 GTERW 200


>ref|XP_003629127.1| F-box family protein [Medicago truncatula]
           gi|355523149|gb|AET03603.1| F-box family protein
           [Medicago truncatula]
          Length = 234

 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 64/189 (33%), Positives = 93/189 (49%), Gaps = 9/189 (4%)
 Frame = -1

Query: 540 LPSDIILNILCRVPLKDLISQCSLVCKTWYNLARHPRFAETHYRWVIQNRCSPCVVLCIL 361
           LP D+I +ILCR+P+K LI Q   VCK+W +L   P+FAE H R              + 
Sbjct: 30  LPFDLITDILCRLPVKFLI-QFQCVCKSWNSLISDPKFAEKHCRLSTTRLVHTLTFSNLP 88

Query: 360 FEGVF-GFIDHQVFDNLDTSAPVHFLDFLDEPTFQPKLYIIGFANGLLCLSEDPLLCDYP 184
           ++ +   +  H VF +L T+   H +  L+ P+ +   Y +G  NG+LCL    L CDY 
Sbjct: 89  YKHILKSYPLHSVFIDLTTNQTAHPITQLETPS-KYYFYFVGSCNGILCL----LACDYA 143

Query: 183 VFYYI--CNPITGEHITLPRPHRLEIVQLSAFVFDSSTSEYKVI----RFYHGRNGGE-- 28
            F  I   NP   +   LP   + E V +  F +D+ T+ YKV+      Y   N  E  
Sbjct: 144 GFVSIRLWNPSIRKFKELPYLQKQEGV-MYGFGYDAVTNNYKVVVVLRACYSSGNSFEVN 202

Query: 27  VFTLGSSRW 1
           V+TL +  W
Sbjct: 203 VYTLSTDSW 211


>ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|222845402|gb|EEE82949.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 16/196 (8%)
 Frame = -1

Query: 540 LPSDIILNILCRVPLKDLISQCSLVCKTWYNLARHPRFAETHYRWVIQNRCSPC------ 379
           LP++I ++IL R+P+ + ++QC  VCK+W +L   P FA  H+     +    C      
Sbjct: 24  LPAEIFVDILSRLPV-EAMTQCKSVCKSWRDLLSTPYFARLHFAKAKPSSLLFCHCSGNK 82

Query: 378 -VVLCILFEGVFGFIDHQVFDNLDTSAPVHFLDFLDEPTFQPKLYIIGFANGLLCLSEDP 202
             + C       G       +N   S P  F   L + TF+ K  ++G +NGLLCLSE  
Sbjct: 83  TKLYCCHIHSSRG----SNINNAMVSMPTKFK--LPKNTFRGK--VVGSSNGLLCLSE-- 132

Query: 201 LLCDYPVFYYICNPITGEHITLPRP---HRLEIVQLSAFVFDSSTSEYKV----IRFYHG 43
            +      +YICNPITGE+I +  P       + +   F ++    + K+    +R  +G
Sbjct: 133 -IHRMKKKFYICNPITGEYIGIAGPKVDQGWHVFEPIGFFYNPQNQQCKILMPRVRVGYG 191

Query: 42  R--NGGEVFTLGSSRW 1
                G++FTLGS+ W
Sbjct: 192 NFPGSGQIFTLGSNSW 207


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
           gi|223528011|gb|EEF30092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 58/184 (31%), Positives = 87/184 (47%), Gaps = 13/184 (7%)
 Frame = -1

Query: 540 LPSDIILNILCRVPLKDLISQCSLVCKTWYNLARHPRFAETHYRWVIQNRCSPCVVLCI- 364
           LP ++ L+IL R+P+  LI+    VC+ W +L +HP  A  H+  +  N   PC++L   
Sbjct: 26  LPCELALDILSRLPITHLIN-VKRVCRFWRSLVQHPLLASMHFSRIANNN-DPCLLLLCD 83

Query: 363 ------LFEGVFGFIDHQVFDNLDTSAPVHFLDFLDEPTFQPKLYIIGFANGLLCLSEDP 202
                 L+   F  +D  + + + T  PV  +         PK  +IG  NGLL L +  
Sbjct: 84  LPIKSHLYSLHFSALDETIIETV-TRIPVPVI---------PKFLVIGSCNGLLYLLDSL 133

Query: 201 LLCDYPVFYYICNPITGEHITLPRP------HRLEIVQLSAFVFDSSTSEYKVIRFYHGR 40
                    YI NP T +++ LP P      HR+     + F F S+T EYKV+R  + R
Sbjct: 134 ----QQRANYIYNPFTSDYLELPEPGQVLNQHRV----ATGFGFHSTTKEYKVVRVVYYR 185

Query: 39  NGGE 28
           N  E
Sbjct: 186 NNKE 189


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 6/175 (3%)
 Frame = -1

Query: 540 LPSDIILNILCRVPLKDLISQCSLVCKTWYNLARHPRFAETHYRWVIQNRCSPCVVLCIL 361
           LP +I  +IL R+P+  L+ Q   VC+ W  L + P+  + +     Q+   PC++L   
Sbjct: 28  LPREIAHDILSRLPITSLV-QFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILHCD 86

Query: 360 F--EGVFGFID---HQVFDNLDTSAPVHFLDFLDEPTFQPKLYIIGFANGLLCLSEDPLL 196
           F       F+D   H+         P  F   +      P+  ++G  NGLLCLS+    
Sbjct: 87  FPIRNNLYFVDFAAHEEEKEKVKRIPAPFSSMM------PEFEVVGSCNGLLCLSDSL-- 138

Query: 195 CDYPVFYYICNPITGEHITLPRPHRLEIVQL-SAFVFDSSTSEYKVIRFYHGRNG 34
             Y    YI NP TG +  LP+  +    ++ S F F+  T EYKVIR  + RNG
Sbjct: 139 --YNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYRNG 191