BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013686
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...    69   1e-14
ref|XP_002523656.1| chromodomain helicase DNA binding protein, p...    56   6e-11
ref|XP_004134532.1| PREDICTED: uncharacterized protein LOC101204...    55   3e-10
gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis mel...    50   2e-09
ref|XP_002329920.1| chromatin remodeling complex subunit [Populu...    51   5e-09

>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score = 68.6 bits (166), Expect(2) = 1e-14
 Identities = 39/78 (50%), Positives = 50/78 (64%)
 Frame = +2

Query: 2    LNLNMTTPQSSSSFVNH*KKPGIQRSPSPEILQLVASFVGPGPHALSIPGMFNSSSVRNE 181
            LN+NM  P SSSSF+   KK     SPSPE+LQLVAS V PGPH   +PGM +S  + ++
Sbjct: 2211 LNINMMNPSSSSSFLKPQKK-STGLSPSPEVLQLVASCVAPGPHIPPVPGMPSSGFLDSK 2269

Query: 182  LHLPKPLSNGDERESREA 235
            L LPK +  G+  +S  A
Sbjct: 2270 LPLPKFIDRGEFPDSTGA 2287



 Score = 36.6 bits (83), Expect(2) = 1e-14
 Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +1

Query: 313  SGDSS-KAHSDPRQNDKAAIEERSSEETLSDHRRSEQK 423
            SGDSS K  SDP   +   +EE SSE T+SDHR S+ +
Sbjct: 2315 SGDSSSKTQSDPSHAEHPNVEEISSEGTVSDHRVSDHE 2352


>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223537108|gb|EEF38742.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 2257

 Score = 55.8 bits (133), Expect(2) = 6e-11
 Identities = 40/102 (39%), Positives = 56/102 (54%)
 Frame = +2

Query: 5    NLNMTTPQSSSSFVNH*KKPGIQRSPSPEILQLVASFVGPGPHALSIPGMFNSSSVRNEL 184
            NL+M     +SS+    KK  +  SPSPE+LQLVA+ V PGPH  S  GM +SS + ++L
Sbjct: 2117 NLDMIN-SLTSSYSKLPKKTSMGLSPSPEVLQLVAACVAPGPHLSSSSGMTSSSFLESKL 2175

Query: 185  HLPKPLSNGDERESREAKNVCKKDEVGQSSQVGGSDQLPVER 310
             LPK +   DE    +A+   +KD+  Q         LP E+
Sbjct: 2176 PLPKSV---DEVGVSDAQGAEEKDKDMQGLPPDTQIILPEEK 2214



 Score = 37.0 bits (84), Expect(2) = 6e-11
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = +1

Query: 316  GDSSKAHSDPRQNDKAAIEERSSEETLSDHRRSEQKE 426
            GDSSK+ ++  Q +K  +EE SSE T+SDH  SE ++
Sbjct: 2221 GDSSKSGTNNSQTEKPDVEEISSEGTVSDHLVSEHEQ 2257


>ref|XP_004134532.1| PREDICTED: uncharacterized protein LOC101204186 [Cucumis sativus]
          Length = 2368

 Score = 55.5 bits (132), Expect(2) = 3e-10
 Identities = 39/91 (42%), Positives = 47/91 (51%)
 Frame = +2

Query: 2    LNLNMTTPQSSSSFVNH*KKPGIQRSPSPEILQLVASFVGPGPHALSIPGMFNSSSVRNE 181
            LNLNM  P  SSS   + KK  +  SPSPE+LQLVAS V PG +  SI G  NSS +   
Sbjct: 2229 LNLNMNPP--SSSLQTNQKKTNMGLSPSPEVLQLVASCVAPGSNLSSISGKLNSSILEKT 2286

Query: 182  LHLPKPLSNGDERESREAKNVCKKDEVGQSS 274
            L L       D   S+ +    KK  +  SS
Sbjct: 2287 LPLSTSHDPEDLLGSKGSPGKGKKQRLSFSS 2317



 Score = 35.0 bits (79), Expect(2) = 3e-10
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = +1

Query: 313  SGDSSKAHSDPRQNDKAAIEERSSEETLSDHRRSEQK 423
            S DSSK  SDP ++ +   EE SSE T+SD   S+Q+
Sbjct: 2331 SDDSSKTQSDPSRSKRPDGEEISSEGTVSDRHASDQE 2367


>gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis melo subsp. melo]
          Length = 2374

 Score = 50.4 bits (119), Expect(2) = 2e-09
 Identities = 39/91 (42%), Positives = 46/91 (50%)
 Frame = +2

Query: 2    LNLNMTTPQSSSSFVNH*KKPGIQRSPSPEILQLVASFVGPGPHALSIPGMFNSSSVRNE 181
            LNLNM  P SSS   N  KK  +  SPSPE+LQLVAS V P  +  SI G  NSS +   
Sbjct: 2233 LNLNMN-PSSSSLHTNQ-KKTNMGLSPSPEVLQLVASCVAPCSNLSSISGKLNSSILDKT 2290

Query: 182  LHLPKPLSNGDERESREAKNVCKKDEVGQSS 274
            L L       D   S+ +    KK  +  SS
Sbjct: 2291 LPLSTSHDPEDLLGSKGSPGKGKKQRLSFSS 2321



 Score = 37.0 bits (84), Expect(2) = 2e-09
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = +1

Query: 313  SGDSSKAHSDPRQNDKAAIEERSSEETLSDHRRSEQK 423
            S DSSK  SDP ++ +   EE SSE T+SD R S+Q+
Sbjct: 2337 SDDSSKTQSDPSRSKRPDGEEISSEGTVSDRRASDQE 2373


>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222871157|gb|EEF08288.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2332

 Score = 50.8 bits (120), Expect(2) = 5e-09
 Identities = 28/64 (43%), Positives = 41/64 (64%)
 Frame = +2

Query: 5    NLNMTTPQSSSSFVNH*KKPGIQRSPSPEILQLVASFVGPGPHALSIPGMFNSSSVRNEL 184
            +L+     +SS+++N  KK  +  SPSPE+LQLVAS V PGPH  S  G  ++S   +++
Sbjct: 2192 SLHKMNSLTSSAYLNIQKKTTMGLSPSPEVLQLVASCVAPGPHLSSGSGATSASLHESKV 2251

Query: 185  HLPK 196
             LPK
Sbjct: 2252 PLPK 2255



 Score = 35.4 bits (80), Expect(2) = 5e-09
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = +1

Query: 313  SGDSSKAHSDPRQNDKAAIEERSSEETLSDHRRSEQK 423
            SGDSSK  SD     +  +E+ SSE TLSDH  S+Q+
Sbjct: 2295 SGDSSKTESDLSPIKQPDVEDISSEGTLSDHPVSDQE 2331