BLASTX nr result

ID: Coptis25_contig00013684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013684
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275549.1| PREDICTED: potassium channel KAT1 [Vitis vin...   206   7e-51
gb|AAL24466.1|AF359522_1 inward rectifying potassium channel [Vi...   205   2e-50
gb|AAL09479.1|AF359521_1 inward rectifying shaker-like K+ channe...   204   4e-50
ref|XP_002519693.1| Potassium channel KAT2, putative [Ricinus co...   194   4e-47
emb|CAK50799.1| inwardly rectifying potassium channel subunit [D...   157   5e-36

>ref|XP_002275549.1| PREDICTED: potassium channel KAT1 [Vitis vinifera]
          Length = 791

 Score =  206 bits (524), Expect = 7e-51
 Identities = 114/219 (52%), Positives = 143/219 (65%), Gaps = 1/219 (0%)
 Frame = -2

Query: 1004 GHGQVHRKVTAGEAFGEIGVLCCRPQPFNARTAELSQILRLNRNSLINIVQTNMEDGNIM 825
            GH Q+  K  AG+ FGEIGVLC RPQ    RT+ELSQILRL+R SL+N +Q NMEDG I+
Sbjct: 430  GHDQILGKAVAGDVFGEIGVLCYRPQSLTVRTSELSQILRLSRTSLMNAIQANMEDGQII 489

Query: 824  MNNLVQKLKDPGSVGFGDADAYLGFLIKEWLDEGPLRGICTQ-GHKVYNPQEDPSIHKGR 648
            MNNL +KLK   S GF D       +++EW+D  P  G  +  G    +P  DPSI + R
Sbjct: 490  MNNLFKKLKGLESSGFTDPHMDPESILREWIDGVPPGGSLSHAGCHDQSPHGDPSIQEAR 549

Query: 647  DIYISMHDSAEKEETDHIYELIKGGADINLPDKYGQTALHVAVRKGHVEMIKLLLEQGAN 468
            DI +   ++ +K + D  +E    G D N   + GQTALHVAV  GH+EM+++LLE+GAN
Sbjct: 550  DIGLLGSEATKKSKADKAHESTGCGIDANSAAEDGQTALHVAVCNGHLEMVRILLERGAN 609

Query: 467  VNKADARGWTPKTLAKLLDQKSIYDLLQYYEGGNRNLED 351
            VNK DARGWTPK LA+   +KSIYDLL  YE  NR L D
Sbjct: 610  VNKKDARGWTPKALAEQEGKKSIYDLLLSYE--NRRLLD 646


>gb|AAL24466.1|AF359522_1 inward rectifying potassium channel [Vitis vinifera]
          Length = 791

 Score =  205 bits (521), Expect = 2e-50
 Identities = 113/219 (51%), Positives = 144/219 (65%), Gaps = 1/219 (0%)
 Frame = -2

Query: 1004 GHGQVHRKVTAGEAFGEIGVLCCRPQPFNARTAELSQILRLNRNSLINIVQTNMEDGNIM 825
            GH Q+  K  AG+ FGEIGVLC RPQ    RT+ELSQILRL+R SL+N ++ NMEDG+I+
Sbjct: 430  GHDQILGKAVAGDVFGEIGVLCYRPQSLTVRTSELSQILRLSRTSLMNAIRANMEDGHII 489

Query: 824  MNNLVQKLKDPGSVGFGDADAYLGFLIKEWLDEGPLRGICTQ-GHKVYNPQEDPSIHKGR 648
            MNNL +KLK   S GF D       +++EW+D  P  G  +  G    +P  DPSI + R
Sbjct: 490  MNNLFKKLKGLESSGFTDPHMDPESILREWIDGVPPGGSLSHAGCHDQSPHGDPSIQEAR 549

Query: 647  DIYISMHDSAEKEETDHIYELIKGGADINLPDKYGQTALHVAVRKGHVEMIKLLLEQGAN 468
            DI +   ++ +K + D  +E    G D N   + GQTALHVAV  GH+EM+++LLE+GAN
Sbjct: 550  DIDLLGSEATKKSKADKAHESTGCGIDANSAAEDGQTALHVAVCNGHLEMVRILLERGAN 609

Query: 467  VNKADARGWTPKTLAKLLDQKSIYDLLQYYEGGNRNLED 351
            VNK DARGWTPK LA+   +KSIYDLL  YE  NR L D
Sbjct: 610  VNKKDARGWTPKALAEQEGKKSIYDLLLSYE--NRRLLD 646


>gb|AAL09479.1|AF359521_1 inward rectifying shaker-like K+ channel [Vitis vinifera]
          Length = 791

 Score =  204 bits (518), Expect = 4e-50
 Identities = 113/219 (51%), Positives = 143/219 (65%), Gaps = 1/219 (0%)
 Frame = -2

Query: 1004 GHGQVHRKVTAGEAFGEIGVLCCRPQPFNARTAELSQILRLNRNSLINIVQTNMEDGNIM 825
            GH Q+  K  AG+ FGEIGVLC RPQ    RT+ELSQILRL+R SL+N +Q NMEDG I+
Sbjct: 430  GHDQILGKAVAGDVFGEIGVLCYRPQSLTVRTSELSQILRLSRTSLMNAIQANMEDGPII 489

Query: 824  MNNLVQKLKDPGSVGFGDADAYLGFLIKEWLDEGPLRGICTQ-GHKVYNPQEDPSIHKGR 648
            MN+L +KLK   S GF D       +++EW+D  P  G  +  G    +P  DPSI + R
Sbjct: 490  MNHLFKKLKGLESSGFTDPHMDPDSILREWIDGVPPGGSLSHAGCHDQSPHGDPSIQEAR 549

Query: 647  DIYISMHDSAEKEETDHIYELIKGGADINLPDKYGQTALHVAVRKGHVEMIKLLLEQGAN 468
            DI +   ++ +K + D  +E    G D N   + GQTALHVAV  GH+EM+++LLE+GAN
Sbjct: 550  DIGLLGSEATKKSKADKAHESTGCGIDANSAAEDGQTALHVAVCNGHLEMVRILLERGAN 609

Query: 467  VNKADARGWTPKTLAKLLDQKSIYDLLQYYEGGNRNLED 351
            VNK DARGWTPK LA+   +KSIYDLL  YE  NR L D
Sbjct: 610  VNKKDARGWTPKALAEQEGKKSIYDLLLSYE--NRRLLD 646


>ref|XP_002519693.1| Potassium channel KAT2, putative [Ricinus communis]
            gi|223541110|gb|EEF42666.1| Potassium channel KAT2,
            putative [Ricinus communis]
          Length = 813

 Score =  194 bits (492), Expect = 4e-47
 Identities = 112/235 (47%), Positives = 142/235 (60%), Gaps = 1/235 (0%)
 Frame = -2

Query: 1004 GHGQVHRKVTAGEAFGEIGVLCCRPQPFNARTAELSQILRLNRNSLINIVQTNMEDGNIM 825
            G  Q+  K TAG+ FGEIGVLC RPQPF ARTAELSQILRL R SL+N +Q N EDG IM
Sbjct: 432  GCNQILGKATAGDTFGEIGVLCYRPQPFTARTAELSQILRLTRTSLMNTMQANSEDGRIM 491

Query: 824  MNNLVQKLKDPGSVGFGDADAYLGFLIKEWLDEGPLRGICTQGHKVYNPQEDPSIHKGRD 645
            M+NL +KL+   S G    D   G + KEW D GP  G  ++         DPS H   D
Sbjct: 492  MSNLFKKLQASESTGVDYRDRDSGLIHKEWFDGGPKEGCSSEAGCQNYSHRDPSGHDAGD 551

Query: 644  IYISMHDSAEKEETDHIYELIKGGADINLPDKYGQTALHVAVRKGHVEMIKLLLEQGANV 465
            +  +  ++ E  +T   +  IK G   N   +  Q  LH AVRKG++EM++  LE GAN 
Sbjct: 552  VSSNEPEATEMCKTCTGHSFIKQGTGGNSTIECVQMDLHAAVRKGNIEMVRSQLEGGANT 611

Query: 464  NKADARGWTPKTLAKLLDQKSIYDLLQYYEGGNRNLEDRKPEPIEPE-KGESKYS 303
            NK DARGWTPK LA+    +SIYDLL  YE   + +++ K + IEPE  G++K S
Sbjct: 612  NKPDARGWTPKALAERQGNRSIYDLLLSYE-KRKKVDEHKIDFIEPETTGDAKIS 665


>emb|CAK50799.1| inwardly rectifying potassium channel subunit [Daucus carota]
          Length = 766

 Score =  157 bits (396), Expect = 5e-36
 Identities = 98/232 (42%), Positives = 136/232 (58%)
 Frame = -2

Query: 1004 GHGQVHRKVTAGEAFGEIGVLCCRPQPFNARTAELSQILRLNRNSLINIVQTNMEDGNIM 825
            GH QV  KVT GE FGE+GVLC RPQP+ ART E+SQILRLNRN+L+NI+  N +DG I+
Sbjct: 430  GHDQVIGKVTEGELFGEVGVLCHRPQPYTARTTEISQILRLNRNALMNIIHENSDDGRII 489

Query: 824  MNNLVQKLKDPGSVGFGDADAYLGFLIKEWLDEGPLRGICTQGHKVYNPQEDPSIHKGRD 645
            MNN  + L++ G      +    G +  E LD           +++Y+   +P I +G  
Sbjct: 490  MNNFYKDLENSGL----QSHKRPGSIYSEQLDVRAEGENYYHANQIYDLSGEPLI-QGNS 544

Query: 644  IYISMHDSAEKEETDHIYELIKGGADINLPDKYGQTALHVAVRKGHVEMIKLLLEQGANV 465
            +      +AE + T   Y     G ++    +  QTALHVAVR GH E +++LLE GANV
Sbjct: 545  V------AAENDRTKSGY-----GMEVKSIAEDDQTALHVAVRTGHPENVRILLEGGANV 593

Query: 464  NKADARGWTPKTLAKLLDQKSIYDLLQYYEGGNRNLEDRKPEPIEPEKGESK 309
            NK DA+G TP +LA+    K IYDLL  Y+   R+  ++K E +E    E++
Sbjct: 594  NKLDAKGRTPISLAENQGNKCIYDLLLSYQ-NTRSTNEQKIELLEESSYETR 644


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