BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013675
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19389.3| unnamed protein product [Vitis vinifera]              112   2e-23
ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23
ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|NP_001174641.1| Os06g0184866 [Oryza sativa Japonica Group] g...   110   2e-22
gb|EAZ36062.1| hypothetical protein OsJ_20372 [Oryza sativa Japo...   110   2e-22

>emb|CBI19389.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  112 bits (281), Expect = 2e-23
 Identities = 57/93 (61%), Positives = 71/93 (76%)
 Frame = +3

Query: 6   KGFVGTSSTYMILVCSLSMEWRFEDAIKIMFDMLDCSKIPDLLTYKTVLEELCRAGRGDD 185
           K  V +SSTY+IL+CSLSME RFE+A KI+FDML  S  PDLLTYKT+LE L R G+ +D
Sbjct: 273 KDLVPSSSTYVILICSLSMERRFEEATKILFDMLGNSMAPDLLTYKTLLEGLSREGKCND 332

Query: 186 AFELLEELRRRTGAMGDTTYNTLLDRLHFMKGE 284
           AFELLE+LR++   MG+ TY TL+  LHF+  E
Sbjct: 333 AFELLEDLRKKDAWMGEKTYKTLVKGLHFLSQE 365


>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  112 bits (281), Expect = 2e-23
 Identities = 57/93 (61%), Positives = 71/93 (76%)
 Frame = +3

Query: 6   KGFVGTSSTYMILVCSLSMEWRFEDAIKIMFDMLDCSKIPDLLTYKTVLEELCRAGRGDD 185
           K  V +SSTY+IL+CSLSME RFE+A KI+FDML  S  PDLLTYKT+LE L R G+ +D
Sbjct: 301 KDLVPSSSTYVILICSLSMERRFEEATKILFDMLGNSMAPDLLTYKTLLEGLSREGKCND 360

Query: 186 AFELLEELRRRTGAMGDTTYNTLLDRLHFMKGE 284
           AFELLE+LR++   MG+ TY TL+  LHF+  E
Sbjct: 361 AFELLEDLRKKDAWMGEKTYKTLVKGLHFLSQE 393


>ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|222843533|gb|EEE81080.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/90 (62%), Positives = 68/90 (75%)
 Frame = +3

Query: 6   KGFVGTSSTYMILVCSLSMEWRFEDAIKIMFDMLDCSKIPDLLTYKTVLEELCRAGRGDD 185
           KG V + STYMIL+CSL ME RFE+AI ++FDML  S  PDLLTY+TVLE LCR G  D 
Sbjct: 234 KGLVPSGSTYMILICSLGMERRFEEAIGVVFDMLGDSMSPDLLTYRTVLEGLCREGMVDK 293

Query: 186 AFELLEELRRRTGAMGDTTYNTLLDRLHFM 275
           AFELLEE R++ G MG+  Y +LL+ LHF+
Sbjct: 294 AFELLEEWRKKDGFMGEKNYKSLLNGLHFV 323


>ref|NP_001174641.1| Os06g0184866 [Oryza sativa Japonica Group]
           gi|55773919|dbj|BAD72524.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|255676790|dbj|BAH93369.1| Os06g0184866 [Oryza
           sativa Japonica Group]
          Length = 388

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/92 (53%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   EKGFVGTSSTYMILVCSLSMEWRFEDAIKIMFDMLDCSKIPDLLTYKTVLEELCRAGRGD 182
           EKGFV T   YM  V +L++EWRFE++  ++ DMLDC + PD++TY+T++EE+CRAGR +
Sbjct: 280 EKGFVPTGGVYMTAVSALALEWRFEESRNVLIDMLDCKRKPDMITYRTLMEEMCRAGRAE 339

Query: 183 DAFELLEELR-RRTGAMGDTTYNTLLDRLHFM 275
           DAFELLEEL+ R+ G +    Y+ LLD LH++
Sbjct: 340 DAFELLEELKERKRGPLDQRMYSELLDGLHWI 371


>gb|EAZ36062.1| hypothetical protein OsJ_20372 [Oryza sativa Japonica Group]
          Length = 335

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/92 (53%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   EKGFVGTSSTYMILVCSLSMEWRFEDAIKIMFDMLDCSKIPDLLTYKTVLEELCRAGRGD 182
           EKGFV T   YM  V +L++EWRFE++  ++ DMLDC + PD++TY+T++EE+CRAGR +
Sbjct: 227 EKGFVPTGGVYMTAVSALALEWRFEESRNVLIDMLDCKRKPDMITYRTLMEEMCRAGRAE 286

Query: 183 DAFELLEELR-RRTGAMGDTTYNTLLDRLHFM 275
           DAFELLEEL+ R+ G +    Y+ LLD LH++
Sbjct: 287 DAFELLEELKERKRGPLDQRMYSELLDGLHWI 318