BLASTX nr result

ID: Coptis25_contig00013665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013665
         (1186 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23955.3| unnamed protein product [Vitis vinifera]              362   8e-98
ref|XP_002281469.2| PREDICTED: F-box protein At3g62230-like [Vit...   360   4e-97
ref|XP_002522999.1| protein with unknown function [Ricinus commu...   345   2e-92
ref|XP_002319293.1| predicted protein [Populus trichocarpa] gi|1...   330   6e-88
ref|XP_003545010.1| PREDICTED: uncharacterized protein LOC100814...   329   7e-88

>emb|CBI23955.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  362 bits (930), Expect = 8e-98
 Identities = 197/327 (60%), Positives = 223/327 (68%), Gaps = 15/327 (4%)
 Frame = -1

Query: 1111 MLLIQASPLSFPAPLRGKAEIRTTRCSLQHHASSSKVVARRVLSGLAVSLIFISRANQVI 932
            ++L+Q+S  S P P+R     +   CS +H  +SSK VAR VLSGLA S++ +S+ANQVI
Sbjct: 25   VVLLQSS--SSP-PIRRGMPSKLMLCSFEH-PTSSKAVARNVLSGLAASVVILSQANQVI 80

Query: 931  AAELYHRLNLWQLAAVTDNSLTLKLDNGSDERSGKLMMMRGMSAKNFDPIRYSGRWFEVA 752
            A  L H  NL QLA+ T N++TL LD GS ERSGKLMMMRGMSAK+FDP+RYSGRWFEVA
Sbjct: 81   AEGLSHPNNLCQLASATSNTITLPLDEGSGERSGKLMMMRGMSAKDFDPVRYSGRWFEVA 140

Query: 751  SLKRGFAGQGQEDCHCTQGVYTYDADASSIQVDTFCVHGGPDGYITGIRGNVQCLSXXXX 572
            SLKRGFAGQGQEDCHCTQGVYT+D ++ +IQVDTFCVHGGPDGYITGIRG VQCL     
Sbjct: 141  SLKRGFAGQGQEDCHCTQGVYTFDMESPAIQVDTFCVHGGPDGYITGIRGKVQCLEEEEL 200

Query: 571  XXXXXXXXXXEMIREK---------------XXXXXXXXXXXXXXXXAKDMGFIQVYSRN 437
                       MIREK                               AKD  FIQ+YSR 
Sbjct: 201  EKSATDLEKQVMIREKCYLRFPTLPFIPKEPYDVIATDYDTFALVSGAKDRSFIQIYSRT 260

Query: 436  PVPGHAFIEKYKSYLENFGYDSSKIKDTPQDCEVMPNSKLXXXXXXXXXXXALTNQFPNL 257
            P PG  FIEKYK+YL NFGYD SKIKDTPQDCEVM NSKL           ALTNQFP+L
Sbjct: 261  PNPGPKFIEKYKAYLANFGYDPSKIKDTPQDCEVMSNSKLAAMMSMSGMQQALTNQFPDL 320

Query: 256  ELNSSVQFNPFTSVFDTLKKLVPLYFK 176
             L S ++FNPFTSVFDTLKKLV LYFK
Sbjct: 321  GLKSPIEFNPFTSVFDTLKKLVELYFK 347


>ref|XP_002281469.2| PREDICTED: F-box protein At3g62230-like [Vitis vinifera]
          Length = 730

 Score =  360 bits (924), Expect = 4e-97
 Identities = 190/302 (62%), Positives = 210/302 (69%), Gaps = 15/302 (4%)
 Frame = -1

Query: 1036 CSLQHHASSSKVVARRVLSGLAVSLIFISRANQVIAAELYHRLNLWQLAAVTDNSLTLKL 857
            CS +H  +SSK VAR VLSGLA S++ +S+ANQVIA  L H  NL QLA+ T N++TL L
Sbjct: 430  CSFEH-PTSSKAVARNVLSGLAASVVILSQANQVIAEGLSHPNNLCQLASATSNTITLPL 488

Query: 856  DNGSDERSGKLMMMRGMSAKNFDPIRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTYDA 677
            D GS ERSGKLMMMRGMSAK+FDP+RYSGRWFEVASLKRGFAGQGQEDCHCTQGVYT+D 
Sbjct: 489  DEGSGERSGKLMMMRGMSAKDFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDM 548

Query: 676  DASSIQVDTFCVHGGPDGYITGIRGNVQCLSXXXXXXXXXXXXXXEMIREK--------- 524
            ++ +IQVDTFCVHGGPDGYITGIRG VQCL                MIREK         
Sbjct: 549  ESPAIQVDTFCVHGGPDGYITGIRGKVQCLEEEELEKSATDLEKQVMIREKCYLRFPTLP 608

Query: 523  ------XXXXXXXXXXXXXXXXAKDMGFIQVYSRNPVPGHAFIEKYKSYLENFGYDSSKI 362
                                  AKD  FIQ+YSR P PG  FIEKYK+YL NFGYD SKI
Sbjct: 609  FIPKEPYDVIATDYDTFALVSGAKDRSFIQIYSRTPNPGPKFIEKYKAYLANFGYDPSKI 668

Query: 361  KDTPQDCEVMPNSKLXXXXXXXXXXXALTNQFPNLELNSSVQFNPFTSVFDTLKKLVPLY 182
            KDTPQDCEVM NSKL           ALTNQFP+L L S ++FNPFTSVFDTLKKLV LY
Sbjct: 669  KDTPQDCEVMSNSKLAAMMSMSGMQQALTNQFPDLGLKSPIEFNPFTSVFDTLKKLVELY 728

Query: 181  FK 176
            FK
Sbjct: 729  FK 730


>ref|XP_002522999.1| protein with unknown function [Ricinus communis]
            gi|223537811|gb|EEF39429.1| protein with unknown function
            [Ricinus communis]
          Length = 341

 Score =  345 bits (884), Expect = 2e-92
 Identities = 185/320 (57%), Positives = 215/320 (67%), Gaps = 17/320 (5%)
 Frame = -1

Query: 1084 SFPAPL--RGKAEIRTTRCSLQHHASSSKVVARRVLSGLAVSLIFISRANQVIAAELYHR 911
            S P PL  RG A     +CSL++  SS  VV RR+LSGLA SLIF+S+ N+V+A ++ H 
Sbjct: 23   SSPPPLIPRGAAGKVVLKCSLENPVSSKGVV-RRLLSGLAASLIFLSQTNKVVALDVSHS 81

Query: 910  LNLWQLAAVTDNSLTLKLDNGSDERSGKLMMMRGMSAKNFDPIRYSGRWFEVASLKRGFA 731
             N+ QLA+  DN +TL L+  S+++SG +M MRGM+AK+FDP+RYSGRWFEVASLKRGFA
Sbjct: 82   HNICQLASAVDNKVTLPLEVRSNDKSGNVMRMRGMTAKDFDPVRYSGRWFEVASLKRGFA 141

Query: 730  GQGQEDCHCTQGVYTYDADASSIQVDTFCVHGGPDGYITGIRGNVQCLSXXXXXXXXXXX 551
            GQGQEDCHCTQGVYTYD    +IQVDTFCVHG PDGYITGIRG VQCLS           
Sbjct: 142  GQGQEDCHCTQGVYTYDMQTPAIQVDTFCVHGSPDGYITGIRGRVQCLSEEDLEKKETEL 201

Query: 550  XXXEMIREK---------------XXXXXXXXXXXXXXXXAKDMGFIQVYSRNPVPGHAF 416
               EMI+EK                               AKD  FIQ+YSR P PG  F
Sbjct: 202  EKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFSLVSGAKDKSFIQIYSRRPDPGPEF 261

Query: 415  IEKYKSYLENFGYDSSKIKDTPQDCEVMPNSKLXXXXXXXXXXXALTNQFPNLELNSSVQ 236
            IEKYK+YL NFGYD SKIKDTPQDCEVM NSKL           ALTNQFP+LEL + ++
Sbjct: 262  IEKYKAYLANFGYDPSKIKDTPQDCEVMSNSKLAAMMSMSGMQQALTNQFPDLELKAPIE 321

Query: 235  FNPFTSVFDTLKKLVPLYFK 176
            FNPFTSVFDT KKL+ LYFK
Sbjct: 322  FNPFTSVFDTFKKLLELYFK 341


>ref|XP_002319293.1| predicted protein [Populus trichocarpa] gi|118489963|gb|ABK96778.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|222857669|gb|EEE95216.1| predicted protein [Populus
            trichocarpa]
          Length = 342

 Score =  330 bits (845), Expect = 6e-88
 Identities = 181/323 (56%), Positives = 211/323 (65%), Gaps = 16/323 (4%)
 Frame = -1

Query: 1096 ASPLSFPAPLRGKAEIRTTRCSLQHHASSSKVVARRVLSGLAVSLIFISRANQVIAAELY 917
            ++P  F   + GK  ++   CS ++  +SS V  R VLSG A SLIF+S+ NQV+AA+++
Sbjct: 24   SAPPHFTRGVPGKLLLK---CSFEN-TTSSDVAVRHVLSGFAASLIFLSQTNQVLAADVF 79

Query: 916  HRLNLWQLAAVTDNSLT-LKLDNGSDERSGKLMMMRGMSAKNFDPIRYSGRWFEVASLKR 740
               N+ QLA+  +N +T L LD+ S    GKLMMMR M+ K+FDP+RYSGRWFEVASLK 
Sbjct: 80   QSHNICQLASAAENKITPLPLDDSSGGGMGKLMMMRAMTVKDFDPVRYSGRWFEVASLKG 139

Query: 739  GFAGQGQEDCHCTQGVYTYDADASSIQVDTFCVHGGPDGYITGIRGNVQCLSXXXXXXXX 560
            GFAGQGQ DCHCTQGVYT D +  +IQVDTFCVHGGP GYITGIRG VQC+S        
Sbjct: 140  GFAGQGQGDCHCTQGVYTLDLETPAIQVDTFCVHGGPSGYITGIRGKVQCVSGDDLEKQA 199

Query: 559  XXXXXXEMIREK---------------XXXXXXXXXXXXXXXXAKDMGFIQVYSRNPVPG 425
                  EMI EK                               AKD  FIQ+YSR P PG
Sbjct: 200  TELEKQEMIAEKCYLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDKSFIQIYSRTPNPG 259

Query: 424  HAFIEKYKSYLENFGYDSSKIKDTPQDCEVMPNSKLXXXXXXXXXXXALTNQFPNLELNS 245
             AFIEKYK+YL NFGYD SKIKDTPQDCEVM NSKL           ALTN+FP+LEL S
Sbjct: 260  PAFIEKYKAYLANFGYDPSKIKDTPQDCEVMSNSKLAAMMSMPGMQKALTNEFPDLELRS 319

Query: 244  SVQFNPFTSVFDTLKKLVPLYFK 176
            SVQFNPFTSVFDTLKKL+ LYFK
Sbjct: 320  SVQFNPFTSVFDTLKKLLELYFK 342


>ref|XP_003545010.1| PREDICTED: uncharacterized protein LOC100814557 [Glycine max]
          Length = 330

 Score =  329 bits (844), Expect = 7e-88
 Identities = 185/334 (55%), Positives = 218/334 (65%), Gaps = 21/334 (6%)
 Frame = -1

Query: 1114 VMLLIQASP-----LSFPAPLRGKAEIRTTRCSLQHHASSSKVVARRVLSGLAVSLIFIS 950
            V LL++ASP      S+P   R  +     +CSL+     SKV+ + VLSGLA SLIFIS
Sbjct: 2    VELLLRASPPPLHPSSYPRQCRTVSGRTLVKCSLE---VPSKVLTKHVLSGLAASLIFIS 58

Query: 949  RANQVIAAELYHRLN-LWQLAAVTDNSLTLKLDNGSDERSGKLMMMRGMSAKNFDPIRYS 773
             ANQ IAA+L    N L QLA+ ++N++    +N   E+   LMMMRGM+AK+FDP+RYS
Sbjct: 59   PANQTIAADLSRAPNNLCQLASASENTVASPFEN---EKGSNLMMMRGMTAKDFDPVRYS 115

Query: 772  GRWFEVASLKRGFAGQGQEDCHCTQGVYTYDADASSIQVDTFCVHGGPDGYITGIRGNVQ 593
            GRWFEVASLKRGFAGQGQEDCHCTQGVYT+D +A SIQVDTFCVHGGP+G+ITGIRG VQ
Sbjct: 116  GRWFEVASLKRGFAGQGQEDCHCTQGVYTFDREAPSIQVDTFCVHGGPNGFITGIRGRVQ 175

Query: 592  CLSXXXXXXXXXXXXXXEMIREK---------------XXXXXXXXXXXXXXXXAKDMGF 458
            CLS              EMI+EK                               AKD  F
Sbjct: 176  CLSEEDLEKTETQLEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFSLVSGAKDQSF 235

Query: 457  IQVYSRNPVPGHAFIEKYKSYLENFGYDSSKIKDTPQDCEVMPNSKLXXXXXXXXXXXAL 278
            IQ+YSR P PG  FI+KYKSYL N+GYD SKIKDTPQDCEVM NS+L           AL
Sbjct: 236  IQIYSRTPNPGPEFIQKYKSYLANYGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQAL 295

Query: 277  TNQFPNLELNSSVQFNPFTSVFDTLKKLVPLYFK 176
            TNQFP+L LN+ ++ NPFTSVFDTLKKL+ LYFK
Sbjct: 296  TNQFPDLGLNAPIELNPFTSVFDTLKKLLELYFK 329


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