BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013646
         (1318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284546.1| PREDICTED: cytochrome c-type biogenesis ccda...   464   e-128
ref|XP_004149294.1| PREDICTED: cytochrome c-type biogenesis ccda...   447   e-123
ref|XP_002531046.1| Thiol:disulfide interchange protein dsbD pre...   440   e-121
ref|XP_002330394.1| predicted protein [Populus trichocarpa] gi|2...   440   e-121
ref|NP_001240262.1| cytochrome c-type biogenesis ccda-like chlor...   424   e-116

>ref|XP_002284546.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
            protein 2 [Vitis vinifera] gi|302143076|emb|CBI20371.3|
            unnamed protein product [Vitis vinifera]
          Length = 358

 Score =  464 bits (1193), Expect = e-128
 Identities = 244/341 (71%), Positives = 277/341 (81%), Gaps = 3/341 (0%)
 Frame = +3

Query: 111  RISSCKHHQTRTNVHMNMMKRSSTDYDVSHDVLASTDAKGNKGFLVKSLXXXXXXXXXX- 287
            + SS KH   +  V + + KRS+   D++ D+++ +  + +  FL+K+            
Sbjct: 18   KFSSHKHETGKYKVPVRVPKRSAMAEDLTQDIVSLSKTEKSGSFLIKTAATSSAFAAANF 77

Query: 288  --PVDSAKALTMENVVEGATSLAMLADINLGDWFGGFLYSSGQQANEAVQDQLSALSFTS 461
                D AKA  +++++EGATS+  LAD ++GDWFGGFLYS+GQQAN AVQDQLSALSFTS
Sbjct: 78   FATTDMAKAANIKDILEGATSVYTLADGSIGDWFGGFLYSAGQQANAAVQDQLSALSFTS 137

Query: 462  LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVIGNSVAFSXXXXXXXXXXXX 641
            LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGK RAEVIGNSVAFS            
Sbjct: 138  LAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKGRAEVIGNSVAFSLGLATTLAILGV 197

Query: 642  XXSFAGKAYGQVGQGLPIAASGLAVLMGLNLLEVIELQLPSFFNNVDPRAAAANLPSSVQ 821
              SFAGKAYGQ+GQGLP+AASGLAV+MGLNLLE+IELQLPSFFNN DPR+AAANLPSSVQ
Sbjct: 198  AASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANLPSSVQ 257

Query: 822  AYLAGLTFALAASPCSTPVLATLLGYVAASKDPLIGSSLLLTYTTGYVAPLLLAASFAGA 1001
            AYLAGLTFALAASPCSTPVLATLLGYVA SKDP+IG SLLLTYTTGYVAPLLLAASFAGA
Sbjct: 258  AYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVAPLLLAASFAGA 317

Query: 1002 LQSLLSFRKFSAWINPMSGALLLGGGMYTMLDRLFPMTMAM 1124
            LQSLLSFRKFSAWINP SGALLLGGG+YT+LDRLFP +M M
Sbjct: 318  LQSLLSFRKFSAWINPTSGALLLGGGIYTLLDRLFPTSMVM 358


>ref|XP_004149294.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
            protein 2-like [Cucumis sativus]
            gi|449528927|ref|XP_004171453.1| PREDICTED: cytochrome
            c-type biogenesis ccda-like chloroplastic protein 2-like
            [Cucumis sativus]
          Length = 362

 Score =  447 bits (1150), Expect = e-123
 Identities = 245/361 (67%), Positives = 275/361 (76%), Gaps = 9/361 (2%)
 Frame = +3

Query: 69   FSVNGCSSSVPNRGRISSCKHHQTRTNV-----HMNMMK----RSSTDYDVSHDVLASTD 221
            F V+   + + N  +IS+ KH  T  ++     H+  MK    +S  D    H  L    
Sbjct: 3    FLVSNSGAFIINSIQISTSKHPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIELVKNR 62

Query: 222  AKGNKGFLVKSLXXXXXXXXXXPVDSAKALTMENVVEGATSLAMLADINLGDWFGGFLYS 401
               N  F   +            VD+AKA T++++ EGA S+  LAD  +GDWFGG LYS
Sbjct: 63   NSRNY-FQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYS 121

Query: 402  SGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEV 581
            +GQQAN AVQDQLSALSFTSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGKS+AEV
Sbjct: 122  AGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEV 181

Query: 582  IGNSVAFSXXXXXXXXXXXXXXSFAGKAYGQVGQGLPIAASGLAVLMGLNLLEVIELQLP 761
            +GNSVAFS              SFAGKAYGQ+GQGLP+AASGLAV+MGLNLLE+IELQLP
Sbjct: 182  VGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLP 241

Query: 762  SFFNNVDPRAAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPLIGSSLL 941
            SFFNN DPR+AAAN PSSVQAYLAGLTFALAASPCSTPVLATLLGYVA SKDP+IG SLL
Sbjct: 242  SFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSLL 301

Query: 942  LTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPMSGALLLGGGMYTMLDRLFPMTMA 1121
            LTYTTGYV PLLLAASFAGALQSLLSFRKFS+WINP+SGALLLGGG+YT LDRLFP+TMA
Sbjct: 302  LTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMA 361

Query: 1122 M 1124
            M
Sbjct: 362  M 362


>ref|XP_002531046.1| Thiol:disulfide interchange protein dsbD precursor, putative [Ricinus
            communis] gi|223529374|gb|EEF31339.1| Thiol:disulfide
            interchange protein dsbD precursor, putative [Ricinus
            communis]
          Length = 350

 Score =  440 bits (1131), Expect = e-121
 Identities = 231/320 (72%), Positives = 264/320 (82%), Gaps = 1/320 (0%)
 Frame = +3

Query: 168  KRSSTDYDVSHDVLASTDAKGNKGFLVKSLXXXXXXXXXXPVDSAKALTMENVVEGATS- 344
            K SST+ ++  +VL+ +         +K++           +D+AKA++ + ++E AT  
Sbjct: 31   KLSSTNENLRRNVLSLSKNDSRCSSRIKTIATSLAVSNLINIDAAKAVSTDKLLEEATIY 90

Query: 345  LAMLADINLGDWFGGFLYSSGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVL 524
            +  LAD  +GDW G  LYS+GQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVL
Sbjct: 91   MYTLADGGIGDWLGRLLYSAGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVL 150

Query: 525  PLTLGYIGAFGSGKSRAEVIGNSVAFSXXXXXXXXXXXXXXSFAGKAYGQVGQGLPIAAS 704
            PLTLGYIGAFGSGKSRAEV+ +S+AF+              SFAGKAYGQ+GQGLP+AAS
Sbjct: 151  PLTLGYIGAFGSGKSRAEVVADSIAFALGLATTLALLGIGASFAGKAYGQIGQGLPLAAS 210

Query: 705  GLAVLMGLNLLEVIELQLPSFFNNVDPRAAAANLPSSVQAYLAGLTFALAASPCSTPVLA 884
            GLAV+MGLNLLE+IELQLPSFFNN DPRAAAAN PSSVQAYLAGLTFALAASPCSTPVLA
Sbjct: 211  GLAVIMGLNLLEIIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLA 270

Query: 885  TLLGYVAASKDPLIGSSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPMSGAL 1064
            TLLGYVAASKDP++G SLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPMSGAL
Sbjct: 271  TLLGYVAASKDPIVGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPMSGAL 330

Query: 1065 LLGGGMYTMLDRLFPMTMAM 1124
            LLGGG+YT LDRLFP++M+M
Sbjct: 331  LLGGGVYTFLDRLFPVSMSM 350


>ref|XP_002330394.1| predicted protein [Populus trichocarpa] gi|222871779|gb|EEF08910.1|
            predicted protein [Populus trichocarpa]
          Length = 265

 Score =  440 bits (1131), Expect = e-121
 Identities = 226/265 (85%), Positives = 240/265 (90%)
 Frame = +3

Query: 330  EGATSLAMLADINLGDWFGGFLYSSGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPC 509
            E A S+  LAD ++GDWFGGFLYSSGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPC
Sbjct: 1    EEAASVYTLADGSIGDWFGGFLYSSGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPC 60

Query: 510  TLSVLPLTLGYIGAFGSGKSRAEVIGNSVAFSXXXXXXXXXXXXXXSFAGKAYGQVGQGL 689
            TLSVLPLTLGYIGAFGSGKSRAE++G+S+AF+              SFAGK YGQ+GQGL
Sbjct: 61   TLSVLPLTLGYIGAFGSGKSRAEIVGDSIAFALGLATTLALLGIAASFAGKTYGQIGQGL 120

Query: 690  PIAASGLAVLMGLNLLEVIELQLPSFFNNVDPRAAAANLPSSVQAYLAGLTFALAASPCS 869
            P+AASGLAV+MGLNLLEVIELQLPSFFNN DPRAAAAN PSSVQAYLAGLTFALAASPCS
Sbjct: 121  PLAASGLAVIMGLNLLEVIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCS 180

Query: 870  TPVLATLLGYVAASKDPLIGSSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINP 1049
            TPVLATLLGYVAASKDP++G SLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINP
Sbjct: 181  TPVLATLLGYVAASKDPVVGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINP 240

Query: 1050 MSGALLLGGGMYTMLDRLFPMTMAM 1124
            MSGALLLGGG+YT LDRLFP TMAM
Sbjct: 241  MSGALLLGGGVYTFLDRLFPPTMAM 265


>ref|NP_001240262.1| cytochrome c-type biogenesis ccda-like chloroplastic protein 2-like
            [Glycine max] gi|32402380|gb|AAP81162.1| c-type
            cytochrome biogenesis protein [Glycine max]
            gi|255636862|gb|ACU18764.1| unknown [Glycine max]
          Length = 344

 Score =  424 bits (1091), Expect = e-116
 Identities = 216/265 (81%), Positives = 239/265 (90%)
 Frame = +3

Query: 330  EGATSLAMLADINLGDWFGGFLYSSGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPC 509
            E A S+  LAD +L DWFGGFLYS+GQQANEAVQ QL++LSFTSLAVI+GAGLVTSLSPC
Sbjct: 80   EVAASIYALADGSLNDWFGGFLYSAGQQANEAVQGQLTSLSFTSLAVIYGAGLVTSLSPC 139

Query: 510  TLSVLPLTLGYIGAFGSGKSRAEVIGNSVAFSXXXXXXXXXXXXXXSFAGKAYGQVGQGL 689
            TLSVLPLTLGYIGAFGSGKSRAEV+G+S+AFS              SFAGKAYGQ+GQGL
Sbjct: 140  TLSVLPLTLGYIGAFGSGKSRAEVVGDSIAFSLGLATTLALLGVGASFAGKAYGQIGQGL 199

Query: 690  PIAASGLAVLMGLNLLEVIELQLPSFFNNVDPRAAAANLPSSVQAYLAGLTFALAASPCS 869
            P+AASGLA++MGLNLLE+IEL+LPSFF++ DPRAAAAN PSSVQAYLAGLTFALAASPCS
Sbjct: 200  PLAASGLAIIMGLNLLEIIELRLPSFFDSFDPRAAAANFPSSVQAYLAGLTFALAASPCS 259

Query: 870  TPVLATLLGYVAASKDPLIGSSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINP 1049
            TPVLATLLGYVAASKDP+IG SLLLTYTTGYV+PLLLAASFAGALQSLLSFRKFSAWINP
Sbjct: 260  TPVLATLLGYVAASKDPVIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKFSAWINP 319

Query: 1050 MSGALLLGGGMYTMLDRLFPMTMAM 1124
            +SGA+LLGGG+YT LDRLFP+TM M
Sbjct: 320  ISGAMLLGGGVYTFLDRLFPVTMVM 344