BLASTX nr result

ID: Coptis25_contig00013635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013635
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272994.1| PREDICTED: transmembrane emp24 domain-contai...   159   2e-37
emb|CBI23839.3| unnamed protein product [Vitis vinifera]              159   2e-37
emb|CAN82472.1| hypothetical protein VITISV_039788 [Vitis vinifera]   157   7e-37
ref|XP_002298173.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
gb|AFK45886.1| unknown [Medicago truncatula]                          146   2e-33

>ref|XP_002272994.1| PREDICTED: transmembrane emp24 domain-containing protein 10-like
           [Vitis vinifera]
          Length = 216

 Score =  159 bits (403), Expect = 2e-37
 Identities = 74/87 (85%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
 Frame = +2

Query: 5   SHEMPTLSVKVTSPYGNNLHHQENVTLGQFAFTTSEAGNYLACFWVDGHNHGGG-ASVNL 181
           +H  PT+S+KVTSPYGNNLHH+ENVT GQFAFTTSEAGNYLACFWVDGHN GGG  SVNL
Sbjct: 63  THSSPTISIKVTSPYGNNLHHKENVTHGQFAFTTSEAGNYLACFWVDGHNQGGGDVSVNL 122

Query: 182 DWKIGIAAKDWESVARKEKLEGVELEL 262
           DWK GI AKDWESVARKEK+EGVELEL
Sbjct: 123 DWKTGIGAKDWESVARKEKIEGVELEL 149


>emb|CBI23839.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score =  159 bits (403), Expect = 2e-37
 Identities = 74/87 (85%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
 Frame = +2

Query: 5   SHEMPTLSVKVTSPYGNNLHHQENVTLGQFAFTTSEAGNYLACFWVDGHNHGGG-ASVNL 181
           +H  PT+S+KVTSPYGNNLHH+ENVT GQFAFTTSEAGNYLACFWVDGHN GGG  SVNL
Sbjct: 39  THSSPTISIKVTSPYGNNLHHKENVTHGQFAFTTSEAGNYLACFWVDGHNQGGGDVSVNL 98

Query: 182 DWKIGIAAKDWESVARKEKLEGVELEL 262
           DWK GI AKDWESVARKEK+EGVELEL
Sbjct: 99  DWKTGIGAKDWESVARKEKIEGVELEL 125


>emb|CAN82472.1| hypothetical protein VITISV_039788 [Vitis vinifera]
          Length = 207

 Score =  157 bits (398), Expect = 7e-37
 Identities = 73/87 (83%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
 Frame = +2

Query: 5   SHEMPTLSVKVTSPYGNNLHHQENVTLGQFAFTTSEAGNYLACFWVDGHNHGGG-ASVNL 181
           +H  PT+S+KVTSPYGNNLHH+ENVT GQFAFTTSEAGNYLACFWV+GHN GGG  SVNL
Sbjct: 54  THSSPTISIKVTSPYGNNLHHKENVTHGQFAFTTSEAGNYLACFWVNGHNQGGGDVSVNL 113

Query: 182 DWKIGIAAKDWESVARKEKLEGVELEL 262
           DWK GI AKDWESVARKEK+EGVELEL
Sbjct: 114 DWKTGIGAKDWESVARKEKIEGVELEL 140


>ref|XP_002298173.1| predicted protein [Populus trichocarpa] gi|222845431|gb|EEE82978.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  147 bits (372), Expect = 7e-34
 Identities = 69/84 (82%), Positives = 76/84 (90%), Gaps = 1/84 (1%)
 Frame = +2

Query: 14  MPTLSVKVTSPYGNNLHHQENVTLGQFAFTTSEAGNYLACFWVDGHNHGGG-ASVNLDWK 190
           +P++SVKVTSPYGNNLHH+ENVT GQFAFTT EAGNYLACFWVDGH  G G  SVN+DWK
Sbjct: 42  IPSISVKVTSPYGNNLHHKENVTHGQFAFTTHEAGNYLACFWVDGHIQGSGDVSVNIDWK 101

Query: 191 IGIAAKDWESVARKEKLEGVELEL 262
            GIAAKDW+SVARKEK+EGVELEL
Sbjct: 102 TGIAAKDWDSVARKEKIEGVELEL 125


>gb|AFK45886.1| unknown [Medicago truncatula]
          Length = 206

 Score =  146 bits (368), Expect = 2e-33
 Identities = 66/82 (80%), Positives = 75/82 (91%)
 Frame = +2

Query: 17  PTLSVKVTSPYGNNLHHQENVTLGQFAFTTSEAGNYLACFWVDGHNHGGGASVNLDWKIG 196
           PTLSVKVTSPYGNN+HH ENVT+G FAFTTSE+GNYLACFWV  ++ GG  S+NLDWKIG
Sbjct: 58  PTLSVKVTSPYGNNIHHNENVTVGNFAFTTSESGNYLACFWVVQNHGGGNVSMNLDWKIG 117

Query: 197 IAAKDWESVARKEKLEGVELEL 262
           +AAKDW+SVARKEK+EGVELEL
Sbjct: 118 VAAKDWDSVARKEKIEGVELEL 139


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