BLASTX nr result

ID: Coptis25_contig00013633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013633
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320216.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21
ref|XP_003626584.1| hypothetical protein MTR_7g117980 [Medicago ...   102   1e-19
ref|XP_002302653.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002533331.1| conserved hypothetical protein [Ricinus comm...    92   1e-16
gb|ABK24731.1| unknown [Picea sitchensis]                              86   6e-15

>ref|XP_002320216.1| predicted protein [Populus trichocarpa] gi|222860989|gb|EEE98531.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  107 bits (267), Expect = 2e-21
 Identities = 67/156 (42%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
 Frame = +1

Query: 79  SSSIAHNKKSEGGSAAIAVHHKKEKDSRKKVDGDHDDAGVRMITIAGENKGAYMDLGSSK 258
           SS IA   K E      A    KEK S KK+  D +D G+R+ITIAGENKGA+M++  S 
Sbjct: 287 SSGIARLAKPE-----TAKDQTKEKGSGKKISSDSEDVGMRVITIAGENKGAFMEVIRSP 341

Query: 259 KKSNL--NPQQLHKN-NPRTRNSDEXXXXXXXXXXXXXXXXXXXXXRTSTTSATPMKAFV 429
           KK     N   L+K  NPR+  SD                      +  +   +PM AF+
Sbjct: 342 KKHFFEGNSHTLNKKGNPRSEGSD---WGSQSSSGEEGNSKKDKNHKGRSMGPSPMSAFM 398

Query: 430 NSNVQGVNNSLLVNSSCAHSDPGVHFSISKKPTTRA 537
           NSNVQGVNNS++ NSSC+H DPGVH ++S+KP+  A
Sbjct: 399 NSNVQGVNNSIVYNSSCSHHDPGVHVALSRKPSGSA 434


>ref|XP_003626584.1| hypothetical protein MTR_7g117980 [Medicago truncatula]
           gi|355501599|gb|AES82802.1| hypothetical protein
           MTR_7g117980 [Medicago truncatula]
          Length = 371

 Score =  102 bits (253), Expect = 1e-19
 Identities = 67/171 (39%), Positives = 93/171 (54%), Gaps = 9/171 (5%)
 Frame = +1

Query: 40  KEWKQD--EMHRNN-NSSSIAHNKKSEGGSAAIAVHHKKE------KDSRKKVDGDHDDA 192
           K W  D  E+HR N N S+   +++++  S +   HH K       + S++K   D +D+
Sbjct: 191 KPWHNDKGELHRENQNHSNGEFHRQTQNHSNSS--HHGKHITVKGRESSKEKKFSDSEDS 248

Query: 193 GVRMITIAGENKGAYMDLGSSKKKSNLNPQQLHKNNPRTRNSDEXXXXXXXXXXXXXXXX 372
           G+R+ITIAGEN+GAYM+L  S+KK    P  LHK     +                    
Sbjct: 249 GMRVITIAGENRGAYMELVQSQKKHQ--PNYLHKKGNTIKVDGGESESSSADEGKINKKD 306

Query: 373 XXXXXRTSTTSATPMKAFVNSNVQGVNNSLLVNSSCAHSDPGVHFSISKKP 525
                RT   S+ PM A++NSNVQ VNNSLL ++SC+H DPGV  S+SKKP
Sbjct: 307 KNNKGRTK--SSIPMAAYMNSNVQCVNNSLLYHASCSHHDPGVRLSLSKKP 355


>ref|XP_002302653.1| predicted protein [Populus trichocarpa] gi|222844379|gb|EEE81926.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score =  100 bits (250), Expect = 2e-19
 Identities = 66/182 (36%), Positives = 95/182 (52%), Gaps = 3/182 (1%)
 Frame = +1

Query: 1   VVAEKKNAFPREEKEWKQDEMHRNNNSSSIAHNKKSEGGSAAIAVHHKKEKDSRKKVDGD 180
           V+ +K    P+  ++ ++D    ++ SS IA   K E           KEK +RKK   D
Sbjct: 272 VLVQKTFDKPKVARDSQRD--FADSLSSGIARLAKQETTKDV----QTKEKGNRKKNSSD 325

Query: 181 HDDAGVRMITIAGENKGAYMDLGSSKKKSNLNPQQ--LHKN-NPRTRNSDEXXXXXXXXX 351
            +D G+++ITIAGENKGA+M++  S KK         LHK  NP++  SD          
Sbjct: 326 SEDGGMKVITIAGENKGAFMEVIRSPKKQVFEGTSHFLHKKGNPKSEGSDSSSSEEGNSK 385

Query: 352 XXXXXXXXXXXXRTSTTSATPMKAFVNSNVQGVNNSLLVNSSCAHSDPGVHFSISKKPTT 531
                              +P+ +F+NSNVQGVNNS++ NSSC+H DPGVH ++S+KP  
Sbjct: 386 KKDKNPNG------KAMGPSPLSSFMNSNVQGVNNSIVYNSSCSHHDPGVHVALSRKPAG 439

Query: 532 RA 537
            A
Sbjct: 440 AA 441


>ref|XP_002533331.1| conserved hypothetical protein [Ricinus communis]
           gi|223526836|gb|EEF29052.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 502

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 52/133 (39%), Positives = 75/133 (56%), Gaps = 7/133 (5%)
 Frame = +1

Query: 145 KEKDSRKKVDGDHDDAGVRMITIAGENKGAYMDLGSSKKKSNL---NPQQLHK--NNPRT 309
           KEK   KK+    +D G+R+IT+AGENKGA+M++  S  K ++   +P  LHK  N+P++
Sbjct: 355 KEKVLHKKIFSGSEDGGMRVITVAGENKGAFMEVIRSPNKKHVFEGSPHHLHKKDNDPKS 414

Query: 310 RNSD--EXXXXXXXXXXXXXXXXXXXXXRTSTTSATPMKAFVNSNVQGVNNSLLVNSSCA 483
                                       +    ++ PM AF+NSNVQGVNNS++ NSSC 
Sbjct: 415 DGIKWISYSSNGSSSEGEGKPKMKDKNHKGKGMNSLPMTAFMNSNVQGVNNSIVYNSSCT 474

Query: 484 HSDPGVHFSISKK 522
           H DPGVH ++S+K
Sbjct: 475 HHDPGVHLALSRK 487


>gb|ABK24731.1| unknown [Picea sitchensis]
          Length = 358

 Score = 86.3 bits (212), Expect = 6e-15
 Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
 Frame = +1

Query: 136 HHKKEKDSRKKVDGDHD----DAGVRMITIAGENKGAYMDLGSSKKKSNLNPQQLHKNNP 303
           H   E   ++K+  + D    D GVR+IT+AGEN+GA MD+GS  +K+++   Q   + P
Sbjct: 213 HRLSELHGQQKLGSNGDQKMQDLGVRVITLAGENRGAIMDMGSESRKNDVLDVQRVNHKP 272

Query: 304 RTRNSDEXXXXXXXXXXXXXXXXXXXXXRTSTTSATPMKAFVNSNVQGVNNSLLVNSSCA 483
              N +E                          +A P+ AFVNSN+Q  NNS+L NS+C 
Sbjct: 273 GGANKNEESPDGNHRQK----------------AAGPVNAFVNSNIQAANNSILYNSTCP 316

Query: 484 HSDPGVHFSISKKPTTRAQT*AP 552
           H DPGV  ++S  P T  +   P
Sbjct: 317 HRDPGVRLALSNNPITSKELAPP 339


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