BLASTX nr result

ID: Coptis25_contig00013626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013626
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73940.1| hypothetical protein VITISV_031602 [Vitis vinifera]    60   3e-07
ref|NP_001235487.1| uncharacterized protein LOC100527140 [Glycin...    57   3e-06

>emb|CAN73940.1| hypothetical protein VITISV_031602 [Vitis vinifera]
          Length = 126

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 40/123 (32%), Positives = 72/123 (58%), Gaps = 9/123 (7%)
 Frame = -1

Query: 611 FDH----YEVLEQSMKSWGEDGRAPRSVFKTKREHNHMISAFSNTRRERAKKRQIYLHSY 444
           FDH    Y++L+++ ++ GE+  + R+  + KR   +M+++ S  R+ERAKKRQI+L SY
Sbjct: 7   FDHGFKGYQILDRT-ETGGEENGSWRTFSRRKRGPYNMVTSLSY-RQERAKKRQIFLQSY 64

Query: 443 TFSS-----AKTKTKCTSRVLKKGLVKAKSAFVKILAFVRVGSIRTCGMSKTPILCCSSP 279
             ++       +K  C    LK+ ++K K+  V I++  R+GS ++C  +    +C SSP
Sbjct: 65  KLTTIDSTLGGSKNSCK---LKRVMIKVKAVVVSIVSISRIGSWKSC--NSRSAICASSP 119

Query: 278 MPI 270
             +
Sbjct: 120 TSV 122


>ref|NP_001235487.1| uncharacterized protein LOC100527140 [Glycine max]
           gi|255631644|gb|ACU16189.1| unknown [Glycine max]
          Length = 112

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 44/120 (36%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
 Frame = -1

Query: 662 MNSLMRNSTLAISHRRRFDHYEVLEQSMKSWGEDGRAPRSVFKTKREHNHMISAFSNTRR 483
           M++L+RN+TL  S R R   YE+L       G  G+            + M+ + S  RR
Sbjct: 1   MSTLVRNATLTFSRRNR---YELL-------GLQGK------------DKMVKSISY-RR 37

Query: 482 ERAKKRQIYLHSYTFSSAKTKTKCTSRV----LKKGLVKAKSAFVKILAFVRVGSIRTCG 315
            RAK+RQI+L +Y  SS  + T    +     LKK  VK K     +L F+RVGS R+CG
Sbjct: 38  RRAKQRQIFLTTYKLSSLNSNTFVEPQKPKLKLKKVAVKVKKIVTSVLMFMRVGSFRSCG 97


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