BLASTX nr result

ID: Coptis25_contig00013614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013614
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539106.1| PREDICTED: uncharacterized protein LOC100813...   287   8e-76
ref|XP_004148249.1| PREDICTED: uncharacterized protein LOC101221...   286   1e-75
ref|XP_002326330.1| predicted protein [Populus trichocarpa] gi|2...   286   1e-75
ref|XP_003597140.1| CCR4-NOT transcription complex subunit [Medi...   286   2e-75
ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801...   283   1e-74

>ref|XP_003539106.1| PREDICTED: uncharacterized protein LOC100813427 [Glycine max]
          Length = 1023

 Score =  287 bits (734), Expect = 8e-76
 Identities = 132/176 (75%), Positives = 156/176 (88%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   CKCGYEICVWCWHQIMDLAEKEDTEGRCPACRTLYDKEKIVGTASN-GRLVAEINSERRL 177
           CKCGYEICVWCWH IMD+AEK+DTEGRCPACR+ YDKEKIVGTA+N  RLV  +N E+R+
Sbjct: 26  CKCGYEICVWCWHHIMDMAEKDDTEGRCPACRSPYDKEKIVGTAANCDRLVNGVNIEKRM 85

Query: 178 KSQKTKPKASDGRKHLSSVRVIQHNLVYIIGIPSDLADEELLQHKEYFGQYGKVQKVSIA 357
           K+QKTK K++DGRK LSSVRVIQ NLVYI+G+P +LADE+LLQ +EYF QYGKV KVS++
Sbjct: 86  KTQKTKSKSTDGRKQLSSVRVIQRNLVYIVGLPLNLADEDLLQRREYFSQYGKVLKVSMS 145

Query: 358 RTAGGAIQHSVNNTCSVYITYLREEEAVRCIQSVHGYVLDGKPLRACFGTTKYCHA 525
           RTA G IQ   N+TCSVYITY +EEEA+RCIQ+VHG+VL+G+PLRACFGTTKYCHA
Sbjct: 146 RTAAGVIQQFPNDTCSVYITYSKEEEAIRCIQNVHGFVLEGRPLRACFGTTKYCHA 201


>ref|XP_004148249.1| PREDICTED: uncharacterized protein LOC101221790 [Cucumis sativus]
           gi|449515295|ref|XP_004164685.1| PREDICTED:
           uncharacterized protein LOC101225784 [Cucumis sativus]
          Length = 1092

 Score =  286 bits (733), Expect = 1e-75
 Identities = 134/176 (76%), Positives = 155/176 (88%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   CKCGYEICVWCWHQIMDLAEKEDTEGRCPACRTLYDKEKIVGTASN-GRLVAEINSERRL 177
           CKCGYEICVWCWH IM++A K+DTEGRCPACR +YDKEKIVG AS+ GRL AEI+ E+++
Sbjct: 26  CKCGYEICVWCWHHIMEMAAKDDTEGRCPACRAIYDKEKIVGMASSCGRLAAEISVEKKV 85

Query: 178 KSQKTKPKASDGRKHLSSVRVIQHNLVYIIGIPSDLADEELLQHKEYFGQYGKVQKVSIA 357
           KSQK K K+S+GRK LSSVRVIQ NLVYI+G+P +LADE+LLQ +EYFGQYGKV KVS++
Sbjct: 86  KSQKAKAKSSEGRKQLSSVRVIQRNLVYIVGLPLNLADEDLLQRREYFGQYGKVLKVSMS 145

Query: 358 RTAGGAIQHSVNNTCSVYITYLREEEAVRCIQSVHGYVLDGKPLRACFGTTKYCHA 525
           RTA G IQ   NNTCSVYITY REEEAVRCIQ+VH +VL+GKPLRACFGTTKYCHA
Sbjct: 146 RTATGVIQQFPNNTCSVYITYSREEEAVRCIQNVHQFVLEGKPLRACFGTTKYCHA 201


>ref|XP_002326330.1| predicted protein [Populus trichocarpa] gi|222833523|gb|EEE72000.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  286 bits (733), Expect = 1e-75
 Identities = 133/176 (75%), Positives = 156/176 (88%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   CKCGYEICVWCWHQIMDLAEKEDTEGRCPACRTLYDKEKIVGTASN-GRLVAEINSERRL 177
           CKCGYE+CVWCW+ IM++A+K+++EGRCPACRT YDKEKIVG A+N  RLVAE++SER+L
Sbjct: 26  CKCGYEVCVWCWNHIMEMADKDNSEGRCPACRTPYDKEKIVGMAANCERLVAEMHSERKL 85

Query: 178 KSQKTKPKASDGRKHLSSVRVIQHNLVYIIGIPSDLADEELLQHKEYFGQYGKVQKVSIA 357
           KS K KPK SDGR HLS+VRVIQ NLVYIIG+P +LADE LLQ KEYFGQYGKV KVSI+
Sbjct: 86  KSHKVKPKTSDGRMHLSNVRVIQRNLVYIIGLPLNLADESLLQRKEYFGQYGKVLKVSIS 145

Query: 358 RTAGGAIQHSVNNTCSVYITYLREEEAVRCIQSVHGYVLDGKPLRACFGTTKYCHA 525
           RTA GAIQH+ NN+C VYITY +E+EAVRCIQSVH +VL+G+ LRACFGTTKYCHA
Sbjct: 146 RTATGAIQHAANNSCCVYITYAKEDEAVRCIQSVHSFVLEGRSLRACFGTTKYCHA 201


>ref|XP_003597140.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
           gi|355486188|gb|AES67391.1| CCR4-NOT transcription
           complex subunit [Medicago truncatula]
          Length = 1007

 Score =  286 bits (731), Expect = 2e-75
 Identities = 130/176 (73%), Positives = 156/176 (88%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   CKCGYEICVWCWHQIMDLAEKEDTEGRCPACRTLYDKEKIVGTASN-GRLVAEINSERRL 177
           CKCGY+ICVWCWH IMD+AEK++TEGRCPACR+ YDKEKIVG A+N  RLVAE++ ER++
Sbjct: 26  CKCGYQICVWCWHHIMDMAEKDETEGRCPACRSPYDKEKIVGMAANCERLVAEVHMERKM 85

Query: 178 KSQKTKPKASDGRKHLSSVRVIQHNLVYIIGIPSDLADEELLQHKEYFGQYGKVQKVSIA 357
           KSQK K K+SDGRK LS+VRVI+ NLVYI+G+P DLADE+LLQ +EYFGQYGKV KVS++
Sbjct: 86  KSQKAKSKSSDGRKQLSNVRVIRRNLVYIVGLPLDLADEDLLQRREYFGQYGKVLKVSMS 145

Query: 358 RTAGGAIQHSVNNTCSVYITYLREEEAVRCIQSVHGYVLDGKPLRACFGTTKYCHA 525
           RTA G +Q   NNTCSVYITY +EEEA+RCIQ+VHG+VL+ +PLRACFGTTKYCHA
Sbjct: 146 RTAAGVVQQFPNNTCSVYITYSKEEEAIRCIQNVHGFVLEDRPLRACFGTTKYCHA 201


>ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801880 [Glycine max]
          Length = 1022

 Score =  283 bits (723), Expect = 1e-74
 Identities = 132/176 (75%), Positives = 154/176 (87%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1   CKCGYEICVWCWHQIMDLAEKEDTEGRCPACRTLYDKEKIVGTASN-GRLVAEINSERRL 177
           CKCGYEICVWCWH IMD+AEK+DTEGRCPACR+ YDKEKIVGTA+N  RLV  IN E+++
Sbjct: 26  CKCGYEICVWCWHHIMDMAEKDDTEGRCPACRSPYDKEKIVGTAANCERLVNGINMEKKM 85

Query: 178 KSQKTKPKASDGRKHLSSVRVIQHNLVYIIGIPSDLADEELLQHKEYFGQYGKVQKVSIA 357
           K+QK K K+SDGRK LSSVRVIQ NLVYI+G+P +LADE+LLQ +EYF QYGKV KVS++
Sbjct: 86  KTQKAKSKSSDGRKQLSSVRVIQRNLVYIVGLPLNLADEDLLQRREYFAQYGKVLKVSMS 145

Query: 358 RTAGGAIQHSVNNTCSVYITYLREEEAVRCIQSVHGYVLDGKPLRACFGTTKYCHA 525
           RTA G IQ   N+TCSVYITY +EEEAV CIQ+VHG+VL+G+PLRACFGTTKYCHA
Sbjct: 146 RTAAGVIQQFPNDTCSVYITYSKEEEAVCCIQNVHGFVLEGRPLRACFGTTKYCHA 201


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