BLASTX nr result
ID: Coptis25_contig00013612
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00013612
(1050 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm... 151 3e-34
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] 142 1e-31
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera] 135 1e-29
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 133 8e-29
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 132 1e-28
>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
gi|223551313|gb|EEF52799.1| conserved hypothetical
protein [Ricinus communis]
Length = 402
Score = 151 bits (381), Expect = 3e-34
Identities = 108/339 (31%), Positives = 161/339 (47%), Gaps = 23/339 (6%)
Frame = -3
Query: 949 WLELPSHLTFVIAEKLFYNVKDLIQFGAVCMYWQSVFIEIRKDXXXXXXXXXXXXXRTEF 770
W ELP L VIA+K N D + AVC WQS I K +
Sbjct: 5 WAELPPELLQVIADK-HTNYVDYLVTRAVCGSWQSA---IAKRPHNHLLCQLPFLLLPYY 60
Query: 769 NSDDQTRSCYSLTEDRVSNFQFRVPHDWHCQSSSHGWLVIVRNNLDVFLFNPFLSVNNEI 590
++ R Y++++D++ + ++ C SSHGWL++V ++ +FL NP I
Sbjct: 61 QNNPDRRGFYNISDDKIYVLELPEAYEKRCCGSSHGWLIMVEDSPSIFLLNPL--TRERI 118
Query: 589 QLPPITAFTRDPRELVFHND------------------YITKAVLSANPILNPNYVVMVI 464
+LP ++ F+ P ++VF N +I KA+LS++P L+ N++ +VI
Sbjct: 119 ELPALSTFSIFPTDVVFENSRNLNENFIMREKFHIRDTFIVKAILSSDPSLDTNFMAVVI 178
Query: 463 HGGCRLLAFWRPGDKAWTSLDSKYTV---VMDIIYFKEQFYVVTHFGEVLAFDLNHPYPK 293
+G LAF R GD AWT +D + D ++ + + V G + L
Sbjct: 179 YGVNENLAFCRSGDAAWTVIDETTSPPRRYKDALFRAGKLFAVDQTGGISI--LTEENTM 236
Query: 292 VSVISPKPTDYSLTCQSKYLV-VSSGDLLQVSRRRTGTGGYFY-TRRFELFKLDTTQTEW 119
+ P + YL S +LL V R R Y Y T RFE++KLD W
Sbjct: 237 IRFADPPLVSSRTGYKQWYLASYSEEELLIVCRYRKVVPDYEYKTERFEIYKLD--DGGW 294
Query: 118 VEVKSLGGRILLLGDNTSLSLSASEFPKCKSNSIYFTDD 2
+ +SLG ++L LG N SLS+SA ++ KCK N IYFTDD
Sbjct: 295 KKKESLGDKMLFLGGNGSLSISALDYSKCKGNCIYFTDD 333
>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
Length = 1290
Score = 142 bits (358), Expect = 1e-31
Identities = 110/336 (32%), Positives = 161/336 (47%), Gaps = 20/336 (5%)
Frame = -3
Query: 949 WLELPSHLTFVIAEKLFYNVKDLIQFGAVCMYWQSVFIEIRKDXXXXXXXXXXXXXRTEF 770
W ++P +IAEKL ++V+D ++FG VC W S+F +D
Sbjct: 922 WSKMPDDPLKLIAEKL-HSVEDYVRFGGVCKSWYSIF----EDKECCCPSSKSPWLMLAE 976
Query: 769 NSDDQTRSCYSLTEDRVSNFQFRVPH---DWHCQSSSHGWLVIVRNNLDVFLFNPFLSVN 599
+ + R YS +V ++ R+P W C S +GWLV + +LD+ L NP V
Sbjct: 977 KENSEIRGFYSPLSGKV--YEIRLPEVVGKW-CWGSPYGWLVTIGTDLDMCLLNPLTRV- 1032
Query: 598 NEIQLPPITAF----------TRDPRELVFHNDYITKAVLSANPILNPNYVVMVIHGGCR 449
+I LP + A T+ R + +I KAVLS+ P +P+ VM+I+
Sbjct: 1033 -QILLPSLRACPNLNTLIDSSTQGSRS---KDIFIYKAVLSSAPS-SPDCAVMIIYSDYG 1087
Query: 448 LLAFWRPGDKAWTSLDSKYTVVMDIIYFKEQFYVVTHFGEVLAFDLNHPYPKVSVISPKP 269
LAF +PG + WT L+S+ V DIIYF F V EV D++ K + P
Sbjct: 1088 RLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAP 1147
Query: 268 TDYS---LTCQSKYLVVSSGDLLQVSRRRTGTGG----YFYTRRFELFKLDTTQTEWVEV 110
+ ++KYLV S G++ V+R T Y T F + KLD W EV
Sbjct: 1148 ALQDVDEIEYEAKYLVESGGEIYMVTRNLYDTARRDIPYMRTWTFSVLKLDMCNKRWEEV 1207
Query: 109 KSLGGRILLLGDNTSLSLSASEFPKCKSNSIYFTDD 2
++L LG+N S S AS++P+ + NSIYFTDD
Sbjct: 1208 ENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDD 1243
>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
Length = 394
Score = 135 bits (341), Expect = 1e-29
Identities = 104/349 (29%), Positives = 158/349 (45%), Gaps = 33/349 (9%)
Frame = -3
Query: 949 WLELPSHLTFVIAEKLFYNVKDLIQFGAVCMYWQSVFIEIRKDXXXXXXXXXXXXXRTEF 770
W +LP L +I ++L + D+I+FG VC +W V +E R+
Sbjct: 6 WSKLPKELIELIFDEL-QHAGDIIRFGTVCRFWGLVALEARQQVFKPLRPLSPMLLLPP- 63
Query: 769 NSDDQTRSCYSLTEDRVSNFQFRVPHDWHCQSSSHGWLVIVRNNL--DVFLFNPFLSVNN 596
N DD Y + + Q D C +S +GWL+ + + ++ NP V
Sbjct: 64 NKDDGAHKLYDFFKKKAYKIQIPAMRDKWCCNSWNGWLITINHTFPYEICCLNPISGV-- 121
Query: 595 EIQLPPITAFTRDPREL--VFHNDYITKAVLSANPI-LNPNYVVMVIHGGCRLLAFWRPG 425
+I LPP F P +L ++ K VLS+ P N N V+M IH LAF +PG
Sbjct: 122 QIDLPPAITFEDSPPDLDETPIEFFLNKVVLSSTPSPSNANCVIMAIHSNYNKLAFCKPG 181
Query: 424 DKAWTSLDSKYTVVMDIIYFKEQFYVVTHFGEVLAFDL-NHPYPKVSVISPKPTDYSLTC 248
DK W +L S+ D++Y+K+ FY + +V+ D+ + P + PK +
Sbjct: 182 DKRWITLKSEDIQYKDLLYYKDNFYAIGR-SKVVQCDIGDDPRVIPFALLPKMGYF---- 236
Query: 247 QSKYLVVSSGDLLQVSR------------RRTGTGGY---------------FYTRRFEL 149
Q +YLV SSG LL V R R T G+ + T F++
Sbjct: 237 QYRYLVESSGCLLYVLRYMDLKDNEDPLKLRYETTGFKVFDLDSDKRKFSYRYETTTFKV 296
Query: 148 FKLDTTQTEWVEVKSLGGRILLLGDNTSLSLSASEFPKCKSNSIYFTDD 2
+ D Q +W +K++ + LLLG N ++S+S +F KSN IYF DD
Sbjct: 297 YNFDFDQKKWKLIKNIKEKALLLGHNQAISISTKKFDGFKSNHIYFLDD 345
>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
Length = 389
Score = 133 bits (334), Expect = 8e-29
Identities = 101/350 (28%), Positives = 159/350 (45%), Gaps = 34/350 (9%)
Frame = -3
Query: 949 WLELPSHLTFVIAEKLFYNVKDLIQFGAVCMYWQSVFIEIRKDXXXXXXXXXXXXXRTEF 770
W +L L IA+K F D ++F AVC W++ + +
Sbjct: 4 WSQLHPELLDFIAKK-FKIYTDYVRFRAVCHNWRASVPKT----PHHLPTQLPWLMLPQS 58
Query: 769 NSDDQTRSCYSLTEDRVSNFQF-RVPHDWHCQSSSHGWLVIVRNNLDVFLFNPFLSVNNE 593
R +SL+ ++ Q H + SSHGWL+I+ ++FL NP ++
Sbjct: 59 QPHHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPL--TRSK 116
Query: 592 IQLPPITAF-------------------------TRDPRELVFHNDYITKAVLSANPILN 488
+ LPP++ F TR +++ + +I K +LS++P
Sbjct: 117 VHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKM--RDSFIKKTILSSSPANG 174
Query: 487 PNYVVMVIHGGCRLLAFWRPGDKAWTSLDSKYTVVMDIIYFKEQFYVVTHFGEVLAFDLN 308
+++ +VI LA R D +WT L+ + D+I+ + FY V +G + D++
Sbjct: 175 SDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVS 234
Query: 307 HPYPKVSVISPKPTDYSLTCQSKYLVVSSGDLLQVSR--------RRTGTGGYFYTRRFE 152
P+VS+I P + Q YLV S +LL V+R T + T RF+
Sbjct: 235 GSSPRVSIIE-MPQQFGGDLQ--YLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQ 291
Query: 151 LFKLDTTQTEWVEVKSLGGRILLLGDNTSLSLSASEFPKCKSNSIYFTDD 2
+ +LD+ W V SLG R L LG+N SLSLS+ +FP CK N IY+TDD
Sbjct: 292 VCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDD 341
>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
Length = 389
Score = 132 bits (333), Expect = 1e-28
Identities = 101/350 (28%), Positives = 158/350 (45%), Gaps = 34/350 (9%)
Frame = -3
Query: 949 WLELPSHLTFVIAEKLFYNVKDLIQFGAVCMYWQSVFIEIRKDXXXXXXXXXXXXXRTEF 770
W +L L IA+K F D ++F AVC W++ + +
Sbjct: 4 WSQLHPELLDFIAKK-FKIYTDYVRFRAVCHNWRASVPKT----PHHLPTQLPWLMLPQS 58
Query: 769 NSDDQTRSCYSLTEDRVSNFQF-RVPHDWHCQSSSHGWLVIVRNNLDVFLFNPFLSVNNE 593
R +SL+ ++ Q H + SSHGWL+I+ ++FL NP ++
Sbjct: 59 QPHHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPL--TRSK 116
Query: 592 IQLPPITAF-------------------------TRDPRELVFHNDYITKAVLSANPILN 488
+ LPP++ F TR +++ + +I K +LS++P
Sbjct: 117 VHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKM--RDSFIKKTILSSSPANG 174
Query: 487 PNYVVMVIHGGCRLLAFWRPGDKAWTSLDSKYTVVMDIIYFKEQFYVVTHFGEVLAFDLN 308
+++ +VI LA R D +WT L+ + D+I+ + FY V +G + D++
Sbjct: 175 SDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVS 234
Query: 307 HPYPKVSVISPKPTDYSLTCQSKYLVVSSGDLLQVSR--------RRTGTGGYFYTRRFE 152
P+VS+I P + Q YLV S +LL V+R T + T RF+
Sbjct: 235 GSSPRVSIIE-MPQQFGGDLQ--YLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQ 291
Query: 151 LFKLDTTQTEWVEVKSLGGRILLLGDNTSLSLSASEFPKCKSNSIYFTDD 2
+ +LD W V SLG R L LG+N SLSLS+ +FP CK N IY+TDD
Sbjct: 292 VCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDD 341