BLASTX nr result

ID: Coptis25_contig00013571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013571
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152214.1| PREDICTED: monothiol glutaredoxin-S15, mitoc...   221   3e-55
ref|XP_002285351.1| PREDICTED: monothiol glutaredoxin-S15, mitoc...   215   2e-53
ref|XP_002517580.1| Monothiol glutaredoxin-4, putative [Ricinus ...   214   3e-53
emb|CAN74745.1| hypothetical protein VITISV_033251 [Vitis vinifera]   212   1e-52
ref|XP_003597838.1| Monothiol glutaredoxin-S15 [Medicago truncat...   209   9e-52

>ref|XP_004152214.1| PREDICTED: monothiol glutaredoxin-S15, mitochondrial-like [Cucumis
           sativus] gi|449484186|ref|XP_004156810.1| PREDICTED:
           monothiol glutaredoxin-S15, mitochondrial-like [Cucumis
           sativus]
          Length = 171

 Score =  221 bits (562), Expect = 3e-55
 Identities = 108/161 (67%), Positives = 133/161 (82%), Gaps = 4/161 (2%)
 Frame = -3

Query: 926 MARLLSNVLFRSIARAPETHSLRTMMVPG----SFTRYSTTEPSDQDTHDDFKPTDKVST 759
           MA+ LSN+LF+ +A  P T + R ++VPG       RYSTT P++ DTHDDFKPT+K+  
Sbjct: 2   MAKSLSNLLFKGLAGLPATRTSR-IVVPGLNYQHGMRYSTTVPNEPDTHDDFKPTNKLEN 60

Query: 758 SGVSLKDIVQKDVEENPVMIYMKGIPDSPMCGFSSLAVKVLNTYKVPLSARNILENPELK 579
           SG+SL+D+V++DV +NPVMIYMKG+PD P CGFS+LAV+VL  Y VPLSARNILE+ ELK
Sbjct: 61  SGLSLRDVVEQDVRQNPVMIYMKGVPDVPQCGFSALAVRVLKLYNVPLSARNILEDAELK 120

Query: 578 NAVKGFSHWPTFPQIFINGEFIGGSDIILSMHQSGELKDKL 456
           +AVK FSHWPTFPQIFI GEFIGGSDIIL++HQSGELK+KL
Sbjct: 121 SAVKSFSHWPTFPQIFIKGEFIGGSDIILNLHQSGELKEKL 161


>ref|XP_002285351.1| PREDICTED: monothiol glutaredoxin-S15, mitochondrial isoform 1
           [Vitis vinifera] gi|297743395|emb|CBI36262.3| unnamed
           protein product [Vitis vinifera]
          Length = 170

 Score =  215 bits (547), Expect = 2e-53
 Identities = 110/172 (63%), Positives = 132/172 (76%), Gaps = 4/172 (2%)
 Frame = -3

Query: 926 MARLLSNVLFRSIARAPETHSLRTMMVPGSF----TRYSTTEPSDQDTHDDFKPTDKVST 759
           MAR LSN   + I+  P      + MV GS      RYSTT P+D DTHDDFK T+K+ +
Sbjct: 1   MARSLSNAFLKGISSFPSARF--STMVSGSIFQNGMRYSTTVPNDPDTHDDFKSTNKLES 58

Query: 758 SGVSLKDIVQKDVEENPVMIYMKGIPDSPMCGFSSLAVKVLNTYKVPLSARNILENPELK 579
           SG++L+DIV++DV++NPVMIYMKG+PD P CGFSSLAV+VL  Y VPLSARNILE+PELK
Sbjct: 59  SGLALQDIVEQDVKDNPVMIYMKGVPDVPRCGFSSLAVRVLKEYNVPLSARNILEDPELK 118

Query: 578 NAVKGFSHWPTFPQIFINGEFIGGSDIILSMHQSGELKDKLIHLLPKVDKEE 423
            AVK FSHWPTFPQIFI GEFIGGSDIIL+MHQ+GELK+KL  +    +K E
Sbjct: 119 IAVKKFSHWPTFPQIFIKGEFIGGSDIILNMHQTGELKEKLKDVSAPQEKSE 170


>ref|XP_002517580.1| Monothiol glutaredoxin-4, putative [Ricinus communis]
           gi|223543212|gb|EEF44744.1| Monothiol glutaredoxin-4,
           putative [Ricinus communis]
          Length = 169

 Score =  214 bits (545), Expect = 3e-53
 Identities = 105/161 (65%), Positives = 128/161 (79%), Gaps = 4/161 (2%)
 Frame = -3

Query: 926 MARLLSNVLFRSIARAPETHSLRTMMVPGSFT----RYSTTEPSDQDTHDDFKPTDKVST 759
           MA+ LSN++ +SIA      S R  +V GS+     RYSTT P D DTH+DF+P +K+  
Sbjct: 1   MAKTLSNIVLKSIAGLSAARSSR--LVSGSYCHNGMRYSTTVPKDPDTHEDFQPNNKLEN 58

Query: 758 SGVSLKDIVQKDVEENPVMIYMKGIPDSPMCGFSSLAVKVLNTYKVPLSARNILENPELK 579
           SG+SLKD+V++DV++NPVMIYMKG+PD P CGFS+LAV+VL  Y  PLSARNILENPELK
Sbjct: 59  SGLSLKDVVEQDVKDNPVMIYMKGVPDLPQCGFSALAVRVLKQYNTPLSARNILENPELK 118

Query: 578 NAVKGFSHWPTFPQIFINGEFIGGSDIILSMHQSGELKDKL 456
           +AVK FS+WPTFPQIFI GEFIGGSDII+ +HQSGELK KL
Sbjct: 119 SAVKSFSNWPTFPQIFIKGEFIGGSDIIMDLHQSGELKQKL 159


>emb|CAN74745.1| hypothetical protein VITISV_033251 [Vitis vinifera]
          Length = 409

 Score =  212 bits (539), Expect = 1e-52
 Identities = 116/209 (55%), Positives = 144/209 (68%), Gaps = 17/209 (8%)
 Frame = -3

Query: 998 SKRTKKL*QKF*LPVYMSVC*INDMARLLSNVLFRSIARAPETH---SLRTMM------- 849
           S   K+L Q   +  ++ +   N MAR LSN   + I+  P       +RT +       
Sbjct: 201 SPNPKQLRQFSAIATFLCLADSNIMARSLSNAFLKGISSFPSARFSTMVRTKIYGTVIQF 260

Query: 848 ---VPGSF----TRYSTTEPSDQDTHDDFKPTDKVSTSGVSLKDIVQKDVEENPVMIYMK 690
              V GS      RYSTT P+D DTHDDFK T+K+ +SG++L+DIV++DV++NPVMIYMK
Sbjct: 261 FNQVSGSIFQNGMRYSTTVPNDPDTHDDFKSTNKLESSGLALQDIVEQDVKDNPVMIYMK 320

Query: 689 GIPDSPMCGFSSLAVKVLNTYKVPLSARNILENPELKNAVKGFSHWPTFPQIFINGEFIG 510
           G+PD P CGFSSLAV+VL  Y VPLSARNILE+PELK AVK FSHWPTFPQIFI GEFIG
Sbjct: 321 GVPDVPRCGFSSLAVRVLKEYNVPLSARNILEDPELKIAVKKFSHWPTFPQIFIKGEFIG 380

Query: 509 GSDIILSMHQSGELKDKLIHLLPKVDKEE 423
           GSDIIL+MHQ+GELK+KL  +    +K E
Sbjct: 381 GSDIILNMHQTGELKEKLKDVSAPQEKSE 409


>ref|XP_003597838.1| Monothiol glutaredoxin-S15 [Medicago truncatula]
           gi|355486886|gb|AES68089.1| Monothiol glutaredoxin-S15
           [Medicago truncatula] gi|388510724|gb|AFK43428.1|
           unknown [Medicago truncatula]
          Length = 158

 Score =  209 bits (532), Expect = 9e-52
 Identities = 102/161 (63%), Positives = 126/161 (78%), Gaps = 2/161 (1%)
 Frame = -3

Query: 914 LSNVLFRSIARAPETHSLRTMMVPGSF--TRYSTTEPSDQDTHDDFKPTDKVSTSGVSLK 741
           ++ +LF+ IA      SL T +   S+   RY+T   +D DTHDDFKPT+KV  SG SL 
Sbjct: 1   MATILFKGIA----ARSLTTRLTSSSYYGMRYTTKVSNDTDTHDDFKPTNKVENSGTSLS 56

Query: 740 DIVQKDVEENPVMIYMKGIPDSPMCGFSSLAVKVLNTYKVPLSARNILENPELKNAVKGF 561
            I+++DV++NPVMIYMKG+PD P CGFSSLAVKVL  Y VPLSARNIL++PE+K+AVK F
Sbjct: 57  SIIEQDVKDNPVMIYMKGVPDFPQCGFSSLAVKVLKQYDVPLSARNILQDPEVKDAVKAF 116

Query: 560 SHWPTFPQIFINGEFIGGSDIILSMHQSGELKDKLIHLLPK 438
           SHWPTFPQ+FI GEFIGGSDI+LSMHQSGELK+KL  ++ K
Sbjct: 117 SHWPTFPQVFIKGEFIGGSDIVLSMHQSGELKEKLKDVVSK 157


Top