BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013569
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    72   4e-11
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    68   9e-10
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...    67   2e-09
ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cuc...    66   3e-09
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    66   3e-09

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 10/137 (7%)
 Frame = +1

Query: 97  IIGMCNGLLCLTTHCDKPFSN-VYVWNPLTNVYITIPCPSIPSYFCLKNYCYKNNKVIRY 273
           ++G CNGLLCL+   D  F++ +Y++NP T  Y  +P          K+  Y + +V+ +
Sbjct: 123 VVGSCNGLLCLS---DSLFNDSLYIYNPFTGRYKELP----------KSLQYPDQEVV-F 168

Query: 274 AFGFHQGSNEYKLLRFMYV------LPTSEQTFQ--TDVSLYTLGGSGVWKTLDSVSY-Y 426
            FGF+  +NEYK++R +Y        P S +     + V + TLG  G W++L  VSY  
Sbjct: 169 GFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPG-WRSLGKVSYRL 227

Query: 427 INALEPALVNGFLHWIS 477
           +      LVNG LHW+S
Sbjct: 228 VRRASETLVNGRLHWVS 244


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
 Frame = +1

Query: 97  IIGMCNGLLCLTTHCDKPFSNVYVWNPLTNVYITIPCPSIPSYFCLKNYCYKNNKVIRYA 276
           ++G CNGLLCL+        ++Y++NP T  Y  +P          K+  Y + +V+   
Sbjct: 124 VVGSCNGLLCLSDSLYN--DSLYIYNPFTGCYKELP----------KSLQYPDQEVVS-G 170

Query: 277 FGFHQGSNEYKLLRFMYV------LPTSEQTFQ--TDVSLYTLGGSGVWKTLDSVSY-YI 429
           FGF+  + EYK++R +Y        P S +     ++V + TL G   W++L  VSY  +
Sbjct: 171 FGFNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTL-GCPEWRSLGKVSYRLV 229

Query: 430 NALEPALVNGFLHWIS 477
                ALVNG LHWIS
Sbjct: 230 RRASGALVNGRLHWIS 245


>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
 Frame = +1

Query: 34  PLYLEFPILPDFWYPPPC---DHPIIGMCNGLLCLTTHCDKPFSNVYVWNPLTNVYITIP 204
           PL+L  P++        C   +  ++G CNGLLC++   D    ++  WNP    +  +P
Sbjct: 77  PLFLNHPLM--------CYSNNITLLGSCNGLLCISNVAD----DIAFWNPSLRQHRILP 124

Query: 205 CPSIPSYFCLKNYCYKNNKVIRYAFGFHQGSNEYKLLRFMYVLPTSEQTFQTDVSLYTLG 384
              +P      +      +V  Y FGF   S +YKL+R  Y +   +++F + V LYTL 
Sbjct: 125 SLPLPRRRLHPDTTLFAARV--YGFGFDHTSPDYKLVRISYFVDLQDRSFDSQVKLYTL- 181

Query: 385 GSGVWKTLDSVSYYINALEP--ALVNGFLHWI 474
            +  WKTL S+ Y +         V   LHW+
Sbjct: 182 RANAWKTLPSMPYALCCARTMGVFVGNSLHWV 213


>ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cucumis sativus]
           gi|449519392|ref|XP_004166719.1| PREDICTED: F-box
           protein At3g07870-like [Cucumis sativus]
          Length = 375

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
 Frame = +1

Query: 88  DHPIIGMCNGLLCLTTHCDKPFSNVYVWNPLTNVYITIPCPSIPSYFCLKNYCYKNNKVI 267
           ++ ++G CNG LCL+        N++++NP T  Y+ +P          K+  + N  V+
Sbjct: 91  EYDVVGSCNGFLCLSDSLYN--ENLFIYNPFTRDYLELP----------KSKDFSNPDVV 138

Query: 268 RYAFGFHQGSNEYKLLRFMY---VLPTSEQTFQTDVSLYTLGGSGVWKTLDSVSYYI-NA 435
            Y  GFH  +   K+L+ +Y         +   ++V ++TLG S  W+++  + +++   
Sbjct: 139 -YGIGFHPQTKRLKILKIVYSKGFRRIQRRFHHSEVQVFTLGTSN-WRSIGRIFHHLAQG 196

Query: 436 LEPALVNGFLHWIS 477
             PA +NG LHW+S
Sbjct: 197 QSPAAINGRLHWVS 210


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
 Frame = +1

Query: 88  DHP---------IIGMCNGLLCLTTHCDKPFSNVYVWNPLTNVYITIPCPSIPSYFCLKN 240
           DHP         ++G CNGLLC+    D    ++  WNP    +  IP   +     ++ 
Sbjct: 76  DHPLMCYSNRIKVLGSCNGLLCICNIAD----DIAFWNPTIRKHRIIPSEPL-----IRK 126

Query: 241 YCYKNNKVIR------YAFGFHQGSNEYKLLRFMYVLPTSEQTFQTDVSLYTLGGSGVWK 402
              +NN +        Y FG+   +++YKL+   Y +    ++F + V +YT+  + VWK
Sbjct: 127 ETNENNTITTLLAAHVYGFGYDSATDDYKLVSISYFVDLHNRSFDSHVKIYTM-RTDVWK 185

Query: 403 TLDSVSYYINALEP--ALVNGFLHWI 474
           TL S+ Y +         V+G LHW+
Sbjct: 186 TLPSMPYALCCARTMGVFVSGALHWV 211