BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013567
         (2628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281757.2| PREDICTED: two-component response regulator-...   543   e-152
gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]   511   e-142
emb|CBI15189.3| unnamed protein product [Vitis vinifera]              508   e-141
ref|XP_002514725.1| sensory transduction histidine kinase, putat...   502   e-139
ref|XP_002330130.1| pseudo response regulator [Populus trichocar...   498   e-138

>ref|XP_002281757.2| PREDICTED: two-component response regulator-like APRR1-like [Vitis
            vinifera]
          Length = 556

 Score =  543 bits (1399), Expect = e-152
 Identities = 297/500 (59%), Positives = 358/500 (71%), Gaps = 14/500 (2%)
 Frame = -1

Query: 1764 IFILVTICMASILLVTSVRTPRQMIDALNAEGPDIDIILAEVDLPVTKGLKLLKYIMRDE 1585
            IF L+  C      VTSVR+ RQ+IDALNAEG DIDIILAEVDLP+TKG+K+LKYIMRD+
Sbjct: 42   IFTLLCGCSYQ---VTSVRSARQVIDALNAEGHDIDIILAEVDLPMTKGMKMLKYIMRDK 98

Query: 1584 QLRRIPIIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLSEKK 1405
            +LRRIPIIMMSAQDEVSVVVKCL+LGAADYLVKPLRTNELLNLWTHMWRRR+MLGL+EK 
Sbjct: 99   ELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKN 158

Query: 1404 ILNYDFDMVASDPSDANTNSTTVFSDDTDEKSRRSTILENSILXXXXXXXXXXXXXXXAL 1225
            ILNYDFD+ ASDPSDANTNST +FSDDTD+KSR S   E  +                + 
Sbjct: 159  ILNYDFDVAASDPSDANTNST-MFSDDTDDKSRMSANPEMVVSVHQEDEVSLSNATIDST 217

Query: 1224 NRPSEYYPDVLRPIQ-----------QTAQVSSCPKKSALKIGESSAFLTYVKSSITPSK 1078
            +  +E  P V+  ++           +T Q+ S PKKS LK+GESSAF TYVKSS+  + 
Sbjct: 218  DVAAE--PPVVNQLECRPDVPGISDRRTGQLLSGPKKSELKVGESSAFFTYVKSSMIKTN 275

Query: 1077 RQRIVCIDETAAQAECATKEETLARWCNSPGANVQQYTSTEVVENYHKGNSYPSSETIPG 898
             Q I  I+E+A Q   +  EE +  W      + Q++ + E  ENY +G+ +PSS +IP 
Sbjct: 276  SQGIPNINESAPQH--SRMEERVQAWSEKGVNDTQEHENGEAWENYSQGDDFPSSNSIPD 333

Query: 897  TTYTEKSCAPVS-LEFHQSRNSKKEHPSTVLMHPSNEAQVNIPGLPSLTSLPYYMHGMMN 721
            +   E SC P + +EF Q RNSK E  S V +HP NE QV+I G P  T+ PY M G+MN
Sbjct: 334  SLSVEMSCTPPAPIEFVQGRNSKGEEFSQVPIHPRNEHQVDISGFPGHTAYPYCMSGVMN 393

Query: 720  QVMMPSSVQMSQGHQHDFGKHAST--MLPQYNSLPQCSTHVPMMPSFPYYPVSVCMQTGQ 547
            QVMMPSS Q+     HD   +A+T  MLPQYN LPQC  HVP + SFPYYPVS+C+Q GQ
Sbjct: 394  QVMMPSSAQLYPKSLHDMQNNATTSAMLPQYNHLPQCPPHVPGVASFPYYPVSICLQPGQ 453

Query: 546  MPATHHWHPNASFASTKVKPDRTERREAALIKFRQKRKDRCFDKKIRYINRKRLAERRPR 367
            M  TH W    + +ST+VK  + +RREAALIKFRQKRK+RCFDKKIRY+NRKRLAERRPR
Sbjct: 454  MSTTHPWPSYGNSSSTEVKLGKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPR 513

Query: 366  VRGQFVRQMNGVDVDLNGQP 307
            VRGQFVR+MNGV+VDLNG+P
Sbjct: 514  VRGQFVRKMNGVNVDLNGRP 533


>gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]
          Length = 545

 Score =  511 bits (1315), Expect = e-142
 Identities = 278/486 (57%), Positives = 343/486 (70%), Gaps = 5/486 (1%)
 Frame = -1

Query: 1749 TICMASILLVTSVRTPRQMIDALNAEGPDIDIILAEVDLPVTKGLKLLKYIMRDEQLRRI 1570
            T+ +     VTSVR+ RQ+IDALNAEG +IDIILAE+DLP+ KG+KLLKYI RD  LRRI
Sbjct: 49   TLLLKCSYQVTSVRSARQVIDALNAEGANIDIILAELDLPLAKGMKLLKYINRDNDLRRI 108

Query: 1569 PIIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLSEKKILNYD 1390
            P+IMMSAQDEVSVVVKCL+LGAADYLVKPLRTNELLNLWTH+WRRR+MLGL+EK ILNYD
Sbjct: 109  PVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHVWRRRRMLGLAEKNILNYD 168

Query: 1389 FDMVASDPSDANTNSTTVFSDDTDEKSRRSTILENSILXXXXXXXXXXXXXXXALNRPSE 1210
            FD+VASDPSDANTNSTT+FSDDTD++S RST  E  +                 +    E
Sbjct: 169  FDLVASDPSDANTNSTTLFSDDTDDRSCRSTNPEMGLSVHEEDESAGAAVEPPYIEL-DE 227

Query: 1209 YYPDVLR-PIQQTAQVSSCPKKSALKIGE-SSAFLTYVKSSITPSKRQRIVCIDETAAQA 1036
            Y PDV +   ++T Q SS PKKS LKIGE SSAF TYVK+S        +  ++E  AQ 
Sbjct: 228  YRPDVPKISDRRTGQFSSGPKKSELKIGESSSAFFTYVKTSTLQKSSPGVANVEENVAQV 287

Query: 1035 ECATKEET-LARWCNSPGANVQQYTSTEVVENYHKGNSYPSSETIPGTTYTEKSCAP-VS 862
                  +  + +  N P  N     S EV E+Y +G+ +PSS ++P +   E+S  P  S
Sbjct: 288  RMGENHQACVQQVVNDPQIN----DSGEVWESYSQGDEFPSSNSMPDSFSIERSSTPSAS 343

Query: 861  LEFHQSRNSKKEHPSTVLMHPSNEAQVNIPGLPSLTSLPYYMHGMMNQVMMPSSVQMSQG 682
            +E  Q R+ K E  S VL HP NE Q++  GLP+ T+ PY M G++NQVMMPS+ Q+   
Sbjct: 344  MELPQQRDLKDERFSQVLSHPRNEHQLDASGLPAQTAFPYCMSGVVNQVMMPSAAQLYHK 403

Query: 681  HQHDFGKHA-STMLPQYNSLPQCSTHVPMMPSFPYYPVSVCMQTGQMPATHHWHPNASFA 505
            + HD   H+   M+ QY+ LPQC  HV  M  FPYYPV++C+Q GQM A+H W P  S +
Sbjct: 404  NLHDLQNHSPKAMMSQYHHLPQCPPHVNGMAPFPYYPVNICLQPGQMSASHSW-PFGSPS 462

Query: 504  STKVKPDRTERREAALIKFRQKRKDRCFDKKIRYINRKRLAERRPRVRGQFVRQMNGVDV 325
            S++V   + +RREAALIKFRQKRK+RCFDKKIRY+NRKRLAERRPRVRGQFVR++NGV+V
Sbjct: 463  SSEVNLSKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNV 522

Query: 324  DLNGQP 307
            DLNG P
Sbjct: 523  DLNGHP 528


>emb|CBI15189.3| unnamed protein product [Vitis vinifera]
          Length = 533

 Score =  508 bits (1308), Expect = e-141
 Identities = 285/494 (57%), Positives = 337/494 (68%), Gaps = 8/494 (1%)
 Frame = -1

Query: 1764 IFILVTICMASILLVTSVRTPRQMIDALNAEGPDIDIILAEVDLPVTKGLKLLKYIMRDE 1585
            IF L+  C      VTSVR+ RQ+IDALNAEG DIDIILAEVDLP+TKG+K+LKYIMRD+
Sbjct: 40   IFTLLCGCSYQ---VTSVRSARQVIDALNAEGHDIDIILAEVDLPMTKGMKMLKYIMRDK 96

Query: 1584 QLRRIPIIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLSEKK 1405
            +LRRIPIIMMSAQDEVSVVVKCL+LGAADYLVKPLRTNELLNLWTHMWRRR+MLGL+EK 
Sbjct: 97   ELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKN 156

Query: 1404 ILNYDFDMVASDPSDANTNSTTVFSDDTDEKSRRSTILENSILXXXXXXXXXXXXXXXAL 1225
            ILNYDFD+ ASDPSDANTNS T+FSDDTD+KSR S   E  +                  
Sbjct: 157  ILNYDFDVAASDPSDANTNS-TMFSDDTDDKSRMSANPEMVVSVHQEDESNATIDSTDVA 215

Query: 1224 NRPS-----EYYPDVLR-PIQQTAQVSSCPKKSALKIGESSAFLTYVKSSITPSKRQRIV 1063
              P      E  PDV     ++T Q+ S PKKS LK+GESSAF TYVKSS+  +  Q I 
Sbjct: 216  AEPPVVNQLECRPDVPGISDRRTGQLLSGPKKSELKVGESSAFFTYVKSSMIKTNSQGIP 275

Query: 1062 CIDETAAQAECATKEETLARWCNSPGANVQQYTSTEVVENYHKGNSYPSSETIPGTTYTE 883
             I+E+A Q   +  EE +  W      + Q++ + E  ENY +G+ +PS E         
Sbjct: 276  NINESAPQH--SRMEERVQAWSEKGVNDTQEHENGEAWENYSQGDDFPSKEF-------- 325

Query: 882  KSCAPVSLEFHQSRNSKKEHPSTVLMHPSNEAQVNIPGLPSLTSLPYYMHGMMNQVMMPS 703
                                 S V +HP NE QV+I G P  T+ PY M G+MNQVMMPS
Sbjct: 326  ---------------------SQVPIHPRNEHQVDISGFPGHTAYPYCMSGVMNQVMMPS 364

Query: 702  SVQMSQGHQHDFGKHAST--MLPQYNSLPQCSTHVPMMPSFPYYPVSVCMQTGQMPATHH 529
            S Q+     HD   +A+T  MLPQYN LPQC  HVP + SFPYYPVS+C+Q GQM  TH 
Sbjct: 365  SAQLYPKSLHDMQNNATTSAMLPQYNHLPQCPPHVPGVASFPYYPVSICLQPGQMSTTHP 424

Query: 528  WHPNASFASTKVKPDRTERREAALIKFRQKRKDRCFDKKIRYINRKRLAERRPRVRGQFV 349
            W    + +ST+VK  + +RREAALIKFRQKRK+RCFDKKIRY+NRKRLAERRPRVRGQFV
Sbjct: 425  WPSYGNSSSTEVKLGKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 484

Query: 348  RQMNGVDVDLNGQP 307
            R+MNGV+VDLNG+P
Sbjct: 485  RKMNGVNVDLNGRP 498


>ref|XP_002514725.1| sensory transduction histidine kinase, putative [Ricinus communis]
            gi|223546329|gb|EEF47831.1| sensory transduction
            histidine kinase, putative [Ricinus communis]
          Length = 550

 Score =  502 bits (1293), Expect = e-139
 Identities = 277/487 (56%), Positives = 342/487 (70%), Gaps = 6/487 (1%)
 Frame = -1

Query: 1749 TICMASILLVTSVRTPRQMIDALNAEGPDIDIILAEVDLPVTKGLKLLKYIMRDEQLRRI 1570
            T+ +     VTSVR+ RQ+IDALNAEGPDIDIIL+EVDLP+ KG+K+LKYI RD++LRRI
Sbjct: 39   TLLLKCSYQVTSVRSARQVIDALNAEGPDIDIILSEVDLPMNKGMKMLKYITRDKELRRI 98

Query: 1569 PIIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLSEKKILNYD 1390
            P+IMMSAQDEVS+VVKCL+LGAADYLVKPLRTNELLNLWTHMWRRR+MLGL+EK IL YD
Sbjct: 99   PVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILIYD 158

Query: 1389 FDMVASDPSDANTNSTTVFSDDTDEKSRRSTILENSILXXXXXXXXXXXXXXXALNRPS- 1213
            FD+VASDPSDANTNSTT+FSDDTD+KSR+    E  +                    P  
Sbjct: 159  FDLVASDPSDANTNSTTLFSDDTDDKSRKCLNPEIGVSTHQEDVVNRGSGTAADEPPPCN 218

Query: 1212 --EYYPDVLR-PIQQTAQVSSCPKKSALKIGESSAFLTYVKSSITPSKRQRIVCIDETAA 1042
              EY PDV     ++TAQ+SS PKKS LKIGESSAF TYVKSS   +  Q     ++   
Sbjct: 219  RLEYRPDVPGISDRRTAQLSSGPKKSELKIGESSAFFTYVKSSTIKNDSQGFPTTEDYTV 278

Query: 1041 QAECATKEETLARWCNSPGANVQQYTSTEVVENYHKGNSYPSSETIPGTTYTEKSCA-PV 865
             +  A  EE L         + Q + + E  ++Y + + + SS +IP +   E+SC  P+
Sbjct: 279  PSLRA--EENLQACAQQVVNDAQLHENRETWQSYPQ-DDFRSSSSIPDSISLERSCTPPM 335

Query: 864  SLEFHQSRNSKKEHPSTVLMHPSNEAQVNIPGLPSLTSLPYYMHGMMNQVMMPSSVQMSQ 685
            S EF Q RN K +    V  +P NE Q++  GL + +  PYYM G++NQV+MP S Q+ Q
Sbjct: 336  SSEFPQ-RNFKDDKLPQVFTNPINELQLDTSGLSTQSMYPYYMSGVVNQVIMPPSAQLYQ 394

Query: 684  GHQHDFGKHA-STMLPQYNSLPQCSTHVPMMPSFPYYPVSVCMQTGQMPATHHWHPNASF 508
             + H+   +A S MLPQYN L QCS HV  M SFPYYPV++C+Q GQMP TH W      
Sbjct: 395  KNLHELQNNAPSPMLPQYNHLSQCSPHVASMASFPYYPVNLCLQPGQMPPTHPWPSFGGS 454

Query: 507  ASTKVKPDRTERREAALIKFRQKRKDRCFDKKIRYINRKRLAERRPRVRGQFVRQMNGVD 328
            +S  VK  + +RREAAL+KFRQKRK+RCFDKKIRY+NRK+LAERRPRVRGQFVR++NGV+
Sbjct: 455  SSPDVKIKKLDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKLNGVN 514

Query: 327  VDLNGQP 307
            VDLNGQP
Sbjct: 515  VDLNGQP 521


>ref|XP_002330130.1| pseudo response regulator [Populus trichocarpa]
            gi|222871264|gb|EEF08395.1| pseudo response regulator
            [Populus trichocarpa]
          Length = 541

 Score =  498 bits (1281), Expect = e-138
 Identities = 275/485 (56%), Positives = 337/485 (69%), Gaps = 4/485 (0%)
 Frame = -1

Query: 1749 TICMASILLVTSVRTPRQMIDALNAEGPDIDIILAEVDLPVTKGLKLLKYIMRDEQLRRI 1570
            T+ +     VTSVR+ RQ+IDALNAEGP+IDIIL+EVD+P+TKG+K+LKYIMRD+ LRRI
Sbjct: 42   TLLLKCSYQVTSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRI 101

Query: 1569 PIIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRQMLGLSEKKILNYD 1390
            P+IMMSAQDEVS+VVKCL+LGAADYLVKPLRTNELLNLWTHMWRRR MLGL+EK ILNYD
Sbjct: 102  PVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMLGLAEKNILNYD 161

Query: 1389 FDMVASDPSDANTNSTTVFSDDTDEKSRRSTILENSILXXXXXXXXXXXXXXXALNRPSE 1210
            FD VASDPSDANTNSTT+FSDDTD+ SRRST  E  +                    P +
Sbjct: 162  FDPVASDPSDANTNSTTLFSDDTDDLSRRSTNPEMGMSTHQEDEPSP--------GDPQK 213

Query: 1209 YYPDVLR-PIQQTAQVSSCPKKSALKIGESSAFLTYVKSSITPSKRQRIVCIDETAAQAE 1033
            Y PDV     ++T  +SS PKKS LKIGESSAF TYVK S   +  Q +  I++   Q  
Sbjct: 214  YRPDVPGISDRRTGHLSSGPKKSELKIGESSAFFTYVKPSTVKNNSQGVALIEDNTNQ-- 271

Query: 1032 CATKEETLARWCNSPGAN-VQQYTSTEVVENYHKGNSYPSSETIPGTTYTEKSCA-PVSL 859
               + E   + C     N      + E +E + + + + SS +IP +   E+SC  P+S 
Sbjct: 272  -NLRMEEKLQVCGEQMLNDAHLQENGEALEIHSQVDDFRSSSSIPDSLSLERSCTPPMSR 330

Query: 858  EFHQSRNSKKEHPSTVLMHPSNEAQVNIPGLPSLTSLPYYMHGMMNQVMMPSSVQMSQGH 679
            EF Q RN K +    VLMH +NE Q++   L + +  PY+M G++NQVMM SS Q+ Q +
Sbjct: 331  EFPQ-RNFKDDR---VLMHQTNEPQLDASSLSTQSVYPYFMSGVVNQVMMSSSAQLYQKN 386

Query: 678  QHDF-GKHASTMLPQYNSLPQCSTHVPMMPSFPYYPVSVCMQTGQMPATHHWHPNASFAS 502
             H+      S MLP YN LPQC  H+  M SFPYYPVS+C+Q GQMP T  W    S  S
Sbjct: 387  LHELQSLGTSAMLPGYNHLPQCPPHMSGMASFPYYPVSICLQPGQMPTTPSWPSFGSSTS 446

Query: 501  TKVKPDRTERREAALIKFRQKRKDRCFDKKIRYINRKRLAERRPRVRGQFVRQMNGVDVD 322
              VK ++ +RREAAL KFRQKRK+RCFDKKIRY+NRK+LAERRPRVRGQFVR++NGV+VD
Sbjct: 447  ADVKLNKVDRREAALNKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVD 506

Query: 321  LNGQP 307
            LNGQP
Sbjct: 507  LNGQP 511