BLASTX nr result

ID: Coptis25_contig00013559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013559
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36259.3| unnamed protein product [Vitis vinifera]              420   e-115
gb|AAM29178.1| biostress-resistance-related protein [Triticum ae...   419   e-115
ref|XP_002324285.1| predicted protein [Populus trichocarpa] gi|2...   418   e-114
dbj|BAJ86349.1| predicted protein [Hordeum vulgare subsp. vulgar...   416   e-114
ref|XP_003565407.1| PREDICTED: acyl-protein thioesterase 1 homol...   415   e-114

>emb|CBI36259.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  420 bits (1079), Expect = e-115
 Identities = 200/283 (70%), Positives = 236/283 (83%), Gaps = 1/283 (0%)
 Frame = +3

Query: 54  LLNARKFREKLF*FIAIIAFTSTVIRAAAMSFTNPSMGSGSRVAR-TFQFGRTHVVKPKG 230
           +L+A+K    LF FI I    + + R+  MS++N SMGSGSR AR TF+FGRTHVV+PKG
Sbjct: 9   ILSAQKIY--LFIFITIGGLFTALARSVTMSYSNHSMGSGSRTARRTFEFGRTHVVRPKG 66

Query: 231 KHQATIVWLHGLGDNGASWSQILETLPLPNIKWICPTAPTQPVAIFGGFPATAWFDVGDL 410
           KHQATIVWLHGLGDNG+SWSQ+LE LPLPNIKWICPTAPT+PVA+ GGFP TAWFDVG+L
Sbjct: 67  KHQATIVWLHGLGDNGSSWSQLLENLPLPNIKWICPTAPTRPVAVLGGFPCTAWFDVGEL 126

Query: 411 SEDGPDDVEGLDASAAHAAQLLSTEPEDIKLGIGGFSMGAATALYSATCCAQGKYGNGNP 590
           S+DGPDD++GLDASAAH A LLSTEP D+KLG+GGFSMGAATALYSATC AQ KYGN +P
Sbjct: 127 SDDGPDDLDGLDASAAHIANLLSTEPADVKLGVGGFSMGAATALYSATCYAQAKYGNNSP 186

Query: 591 YPVNFAAVVGLSGWLPCARGLKNKIEDSQEATTRASSLPLLLCHGKGDDVVLHKHGERSS 770
           YPVN  AVVGLSGWLP +R L+NKIE S EA  RA+SLP++LCHG  DDVV + +GERS+
Sbjct: 187 YPVNLKAVVGLSGWLPGSRSLRNKIEGSHEAARRAASLPIMLCHGMNDDVVAYNYGERSA 246

Query: 771 EVLKSVGFQNLIFKSYSGLGHYTVPEEINEVCNWLSARLELDG 899
             L S GF+ L FK+Y GLGHYTVP+E++EVC WL+ARL L+G
Sbjct: 247 HCLSSAGFRYLTFKAYDGLGHYTVPKEMDEVCTWLTARLGLEG 289


>gb|AAM29178.1| biostress-resistance-related protein [Triticum aestivum]
          Length = 324

 Score =  419 bits (1076), Expect = e-115
 Identities = 204/275 (74%), Positives = 225/275 (81%), Gaps = 9/275 (3%)
 Frame = +3

Query: 96  IAIIAFTSTVIR-----AAAMSFTNPSMGSGSRVA----RTFQFGRTHVVKPKGKHQATI 248
           I  +A  S V R     AAA +    S G  S VA    R F++GRTHVV+PKG H+ATI
Sbjct: 44  IGFVALASVVARRGGVPAAAATVRGMSFGGASSVAAGGKRPFEYGRTHVVRPKGAHKATI 103

Query: 249 VWLHGLGDNGASWSQILETLPLPNIKWICPTAPTQPVAIFGGFPATAWFDVGDLSEDGPD 428
           VWLHGLGDNGASWSQ+LETLPLPNIKWICPTAPT+PVAIFGGFP+TAWFDV DLSED PD
Sbjct: 104 VWLHGLGDNGASWSQLLETLPLPNIKWICPTAPTRPVAIFGGFPSTAWFDVADLSEDSPD 163

Query: 429 DVEGLDASAAHAAQLLSTEPEDIKLGIGGFSMGAATALYSATCCAQGKYGNGNPYPVNFA 608
           DVEGLD+SAAH A LLSTEP DIKLG+GGFSMGAATALYS TC A GKYGNGNPYPVN +
Sbjct: 164 DVEGLDSSAAHVANLLSTEPADIKLGVGGFSMGAATALYSGTCFAHGKYGNGNPYPVNLS 223

Query: 609 AVVGLSGWLPCARGLKNKIEDSQEATTRASSLPLLLCHGKGDDVVLHKHGERSSEVLKSV 788
             VGLSGWLPCAR LKNKIE SQEA  +ASSLPL+LCHGK DDVVL+KHGERS++ LKS 
Sbjct: 224 VAVGLSGWLPCARSLKNKIESSQEAAQKASSLPLMLCHGKADDVVLYKHGERSADALKST 283

Query: 789 GFQNLIFKSYSGLGHYTVPEEINEVCNWLSARLEL 893
           GF N+ FKSYS LGHYTVPEE++EV  WL+A LEL
Sbjct: 284 GFANVEFKSYSRLGHYTVPEEMDEVVKWLTASLEL 318


>ref|XP_002324285.1| predicted protein [Populus trichocarpa] gi|222865719|gb|EEF02850.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  418 bits (1074), Expect = e-114
 Identities = 191/254 (75%), Positives = 222/254 (87%), Gaps = 1/254 (0%)
 Frame = +3

Query: 141 MSFTNPSMGSGSR-VARTFQFGRTHVVKPKGKHQATIVWLHGLGDNGASWSQILETLPLP 317
           MS+   ++GSGSR   RTF+FGRTHVV+PKGKHQATIVWLHGLGD G+SWSQ+LETLPLP
Sbjct: 1   MSYNTSAVGSGSRNTTRTFEFGRTHVVRPKGKHQATIVWLHGLGDKGSSWSQLLETLPLP 60

Query: 318 NIKWICPTAPTQPVAIFGGFPATAWFDVGDLSEDGPDDVEGLDASAAHAAQLLSTEPEDI 497
           NIKWICPTAPT+PVAIFGGFP TAWFDVGD+SED PDD+EGL+ASA H A LLSTEP DI
Sbjct: 61  NIKWICPTAPTRPVAIFGGFPCTAWFDVGDISEDAPDDLEGLEASATHVANLLSTEPADI 120

Query: 498 KLGIGGFSMGAATALYSATCCAQGKYGNGNPYPVNFAAVVGLSGWLPCARGLKNKIEDSQ 677
           KLG+GGFSMGAATALYSATC   G+YGNGN YP+N  AVVGLSGWLPC+R L+++IE S 
Sbjct: 121 KLGVGGFSMGAATALYSATCHVLGQYGNGNQYPINLTAVVGLSGWLPCSRTLRSRIERSD 180

Query: 678 EATTRASSLPLLLCHGKGDDVVLHKHGERSSEVLKSVGFQNLIFKSYSGLGHYTVPEEIN 857
           EA  RA+SLP+LLCHG GDDVV HKHGE+S++ L S GF+NL F+SY+GLGHYT+PEE++
Sbjct: 181 EAARRAASLPILLCHGSGDDVVAHKHGEKSAQALSSAGFRNLTFRSYNGLGHYTIPEEMD 240

Query: 858 EVCNWLSARLELDG 899
           EVC+WL+ RL LDG
Sbjct: 241 EVCHWLTTRLGLDG 254


>dbj|BAJ86349.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326524496|dbj|BAK00631.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 280

 Score =  416 bits (1069), Expect = e-114
 Identities = 199/258 (77%), Positives = 219/258 (84%), Gaps = 4/258 (1%)
 Frame = +3

Query: 132 AAAMSFTNPSMGSGSRVA----RTFQFGRTHVVKPKGKHQATIVWLHGLGDNGASWSQIL 299
           AAA +    S G  S VA    R F++GRTHVV+PKG H+ATIVWLHGLGDNGASWSQ+L
Sbjct: 17  AAAATVRGMSFGGASSVAAGAKRPFEYGRTHVVRPKGAHKATIVWLHGLGDNGASWSQLL 76

Query: 300 ETLPLPNIKWICPTAPTQPVAIFGGFPATAWFDVGDLSEDGPDDVEGLDASAAHAAQLLS 479
           ETLPLPNIKWICPTAPT+PVAIFGGFP+TAWFDV DLSED PDDVEGLD+SAAH A LLS
Sbjct: 77  ETLPLPNIKWICPTAPTRPVAIFGGFPSTAWFDVADLSEDSPDDVEGLDSSAAHVANLLS 136

Query: 480 TEPEDIKLGIGGFSMGAATALYSATCCAQGKYGNGNPYPVNFAAVVGLSGWLPCARGLKN 659
           TEP DIKLG+GGFSMGAATALYS TC A GKYGNGNPYPVN +  VGLSGWLPCAR LKN
Sbjct: 137 TEPADIKLGVGGFSMGAATALYSGTCFAHGKYGNGNPYPVNLSVAVGLSGWLPCARSLKN 196

Query: 660 KIEDSQEATTRASSLPLLLCHGKGDDVVLHKHGERSSEVLKSVGFQNLIFKSYSGLGHYT 839
           KIE SQEA  +ASSLPL+LCHGK DDVVL+KHGERS++ LKS GF N+ FKSYS LGHYT
Sbjct: 197 KIESSQEAAQKASSLPLMLCHGKADDVVLYKHGERSADALKSTGFANVEFKSYSRLGHYT 256

Query: 840 VPEEINEVCNWLSARLEL 893
           VPEE++EV  WL+A LEL
Sbjct: 257 VPEEMDEVVKWLTASLEL 274


>ref|XP_003565407.1| PREDICTED: acyl-protein thioesterase 1 homolog 1-like [Brachypodium
           distachyon]
          Length = 359

 Score =  415 bits (1067), Expect = e-114
 Identities = 200/271 (73%), Positives = 222/271 (81%), Gaps = 4/271 (1%)
 Frame = +3

Query: 93  FIAIIAFTSTVIRAAAMSFTNPSMGSGSRVA----RTFQFGRTHVVKPKGKHQATIVWLH 260
           F A+ +       AAA      S G GS VA    R F++GRTHVV+PKG H+ATIVWLH
Sbjct: 84  FAALASRGGGAAAAAAAFVRGMSFGGGSSVAAGAKRPFEYGRTHVVRPKGAHKATIVWLH 143

Query: 261 GLGDNGASWSQILETLPLPNIKWICPTAPTQPVAIFGGFPATAWFDVGDLSEDGPDDVEG 440
           GLGDNGASWSQ+LETLPLPNIKWICPTAPT+PVAIFGGFP+TAWFDV DLSED PDDVEG
Sbjct: 144 GLGDNGASWSQLLETLPLPNIKWICPTAPTRPVAIFGGFPSTAWFDVADLSEDSPDDVEG 203

Query: 441 LDASAAHAAQLLSTEPEDIKLGIGGFSMGAATALYSATCCAQGKYGNGNPYPVNFAAVVG 620
           LDASAAH A LLSTEP DIKLG+GGFSMGAATALYS TC A GKYGNGNPYPVN +  VG
Sbjct: 204 LDASAAHVANLLSTEPADIKLGVGGFSMGAATALYSGTCFAHGKYGNGNPYPVNLSLAVG 263

Query: 621 LSGWLPCARGLKNKIEDSQEATTRASSLPLLLCHGKGDDVVLHKHGERSSEVLKSVGFQN 800
           LSGWLPCAR LKNKIE SQEA  +AS LPLLLCHGK DDVVL+KHGERS + LKS GF N
Sbjct: 264 LSGWLPCARSLKNKIESSQEAAQKASLLPLLLCHGKADDVVLYKHGERSVDALKSTGFSN 323

Query: 801 LIFKSYSGLGHYTVPEEINEVCNWLSARLEL 893
           ++FKSY+ LGHYTVPEE++EV  W++A LE+
Sbjct: 324 VVFKSYNRLGHYTVPEEMDEVGKWITASLEI 354


Top