BLASTX nr result
ID: Coptis25_contig00013540
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00013540
(601 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002332020.1| BED finger-nbs-lrr resistance protein [Popul... 115 4e-24
ref|XP_002335262.1| predicted protein [Populus trichocarpa] gi|2... 115 4e-24
ref|XP_002332019.1| BED finger-nbs-lrr resistance protein [Popul... 115 8e-24
ref|XP_002333022.1| nbs-lrr resistance protein [Populus trichoca... 115 8e-24
ref|XP_002334714.1| predicted protein [Populus trichocarpa] gi|2... 114 1e-23
>ref|XP_002332020.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
gi|222875245|gb|EEF12376.1| BED finger-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 1093
Score = 115 bits (289), Expect = 4e-24
Identities = 71/195 (36%), Positives = 114/195 (58%), Gaps = 9/195 (4%)
Frame = +1
Query: 28 NEGLKLLKELKDASVLHVFR----QHLRMHAIFRGLAIDIMSEQSGLLFMSGLGLKVLPY 195
+EG +L L++ +L + ++MH + R +AI I+ E S + +G LK LP
Sbjct: 568 DEGHTMLNRLENVCLLESANCNNGRRVKMHDLIRDMAIQILLENSQGMVKAGAQLKELPD 627
Query: 196 DLEWADG-RKISLMRNRISFLDDLPXXXXXXXXXXXR----DNTFLYDISPSFFSKMFSL 360
EW ++SLM+N+I +++P DN L ++ SFF ++ L
Sbjct: 628 AEEWMKNLTRVSLMQNKI---EEIPSSHSPMCPNLSTLFLCDNRGLRFVADSFFKQLHGL 684
Query: 361 QVLDISCTGIAELPSSLSDLVCLHTLFLQQCTSLRKIPSVENLKALRFLNLRGTSIKELP 540
+VLD+SCTGI LP S+SDLV L L L++C +LR +PS++ L AL+ L+L T++K++P
Sbjct: 685 KVLDLSCTGIENLPDSVSDLVSLTALLLKKCENLRHVPSLKKLMALKRLDLSRTALKKMP 744
Query: 541 EGMETLIRLRFLDLS 585
+GME L LR+L ++
Sbjct: 745 QGMECLNNLRYLRMN 759
>ref|XP_002335262.1| predicted protein [Populus trichocarpa] gi|222833168|gb|EEE71645.1|
predicted protein [Populus trichocarpa]
Length = 331
Score = 115 bits (289), Expect = 4e-24
Identities = 69/171 (40%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Frame = +1
Query: 88 QHLRMHAIFRGLAIDIMSEQSGLLFMSGLGLKVLPYDLEWADG-RKISLMRNRISFLDDL 264
+ ++MH + R +AI I+ E S + +G LK LP EW + +SLMRN I +++
Sbjct: 20 RRVKMHDLIRDMAIQILLENSQGMVKAGAQLKELPDAEEWTENLTMVSLMRNEI---EEI 76
Query: 265 PXXXXXXXXXXXR----DNTFLYDISPSFFSKMFSLQVLDISCTGIAELPSSLSDLVCLH 432
P DN L I+ SFF ++ L+VLD+S TGI LP S+SDLV L
Sbjct: 77 PSSYSPRCPYLSTLFLCDNEGLGFIADSFFKQLHGLKVLDLSGTGIENLPDSVSDLVSLT 136
Query: 433 TLFLQQCTSLRKIPSVENLKALRFLNLRGTSIKELPEGMETLIRLRFLDLS 585
L L++C +LR +PS+E L+AL+ L+L GT +K++P+GME L LR+L ++
Sbjct: 137 ALLLKKCENLRHVPSLEKLRALKRLDLYGTPLKKMPQGMECLTNLRYLRMN 187
>ref|XP_002332019.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
gi|222875244|gb|EEF12375.1| BED finger-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 909
Score = 115 bits (287), Expect = 8e-24
Identities = 71/197 (36%), Positives = 113/197 (57%), Gaps = 11/197 (5%)
Frame = +1
Query: 28 NEGLKLLKELKDASVLHVFRQH------LRMHAIFRGLAIDIMSEQSGLLFMSGLGLKVL 189
+EG +L L++ +L + + ++MH + R +AI I+ E S + +G LK L
Sbjct: 529 DEGHMMLNRLENVCLLESAKMNYDDSRRVKMHDLIRDMAIQILLENSQGMVKAGAQLKEL 588
Query: 190 PYDLEWADG-RKISLMRNRISFLDDLPXXXXXXXXXXXR----DNTFLYDISPSFFSKMF 354
P EW + R++SLM N I +++P DN L ++ SFF ++
Sbjct: 589 PDAEEWMENLRRVSLMENEI---EEIPSSHSPMCPNLSTLFLCDNRGLRFVADSFFKQLN 645
Query: 355 SLQVLDISCTGIAELPSSLSDLVCLHTLFLQQCTSLRKIPSVENLKALRFLNLRGTSIKE 534
L VLD+S TGI LP S+SDLV L L ++ C +LR +PS++ L+AL+ L+L T++++
Sbjct: 646 GLMVLDLSRTGIENLPDSISDLVSLTALLIKNCKNLRHVPSLKKLRALKRLDLSSTALEK 705
Query: 535 LPEGMETLIRLRFLDLS 585
+P+GME L LRFL +S
Sbjct: 706 MPQGMECLTNLRFLRMS 722
>ref|XP_002333022.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222834654|gb|EEE73117.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 674
Score = 115 bits (287), Expect = 8e-24
Identities = 71/195 (36%), Positives = 114/195 (58%), Gaps = 8/195 (4%)
Frame = +1
Query: 25 INEGLKLLKELKDASVLHVFRQH-----LRMHAIFRGLAIDIMSEQSGLLFMSGLGLKVL 189
I+EG +L L+ +L + + ++MH + R +AI I+ E S + +G L+ +
Sbjct: 373 IDEGHTMLSRLESVCLLEGIKWYGDYRCVKMHDLIRDMAIQILQENSQGMVKAGARLREV 432
Query: 190 PYDLEWADG-RKISLMRNRISFLDDL--PXXXXXXXXXXXRDNTFLYDISPSFFSKMFSL 360
P EW + ++SLMRN I + P R N+ L I+ SFF ++ L
Sbjct: 433 PGAEEWTENLTRVSLMRNHIKEIPSSHSPRCPSLSILLLCR-NSELQFIANSFFKQLHGL 491
Query: 361 QVLDISCTGIAELPSSLSDLVCLHTLFLQQCTSLRKIPSVENLKALRFLNLRGTSIKELP 540
+VLD+S TGI +LP S+S+LV L TL L C LR +PS+E L+AL+ L+L GT+++++P
Sbjct: 492 KVLDLSYTGITKLPDSVSELVSLTTLLLIDCKMLRHVPSLEKLRALKRLDLSGTALEKIP 551
Query: 541 EGMETLIRLRFLDLS 585
+GME L L++L ++
Sbjct: 552 QGMECLYNLKYLRMN 566
>ref|XP_002334714.1| predicted protein [Populus trichocarpa] gi|222874252|gb|EEF11383.1|
predicted protein [Populus trichocarpa]
Length = 596
Score = 114 bits (286), Expect = 1e-23
Identities = 73/201 (36%), Positives = 115/201 (57%), Gaps = 8/201 (3%)
Frame = +1
Query: 7 GDIVSEINEGLKLLKE---LKDASVLHVFRQHLRMHAIFRGLAIDIMSEQSGLLFMSGLG 177
GD E + L L+ L+ A++ +V R+ ++MH + R +AI I+ + S + +G
Sbjct: 59 GDAFDEGHTMLNKLENVCLLESANMYYVARRRVKMHDLIRDMAIQILLDNSQGMVKAGAQ 118
Query: 178 LKVLPYDLEWADG-RKISLMRNRISFLDDLPXXXXXXXXXXXR----DNTFLYDISPSFF 342
LK LP EW + ++SL+RN+I ++P N L I+ SFF
Sbjct: 119 LKELPDAEEWTENLTRVSLIRNKIK---EIPSSHSPMCPYLSTLLLCQNHCLRFIADSFF 175
Query: 343 SKMFSLQVLDISCTGIAELPSSLSDLVCLHTLFLQQCTSLRKIPSVENLKALRFLNLRGT 522
++ L+VLD+S T I LP S+SDLV L L L +C +LR +PS+E L+AL+ L+L T
Sbjct: 176 KQLHGLKVLDLSGTSIENLPDSVSDLVSLTALLLNECENLRHVPSLEKLRALKRLDLYWT 235
Query: 523 SIKELPEGMETLIRLRFLDLS 585
+K++P+GME L LR+L ++
Sbjct: 236 PLKKMPQGMECLTNLRYLRMN 256