BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013538
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...   171   6e-41
ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...   170   2e-40
emb|CBI41008.3| unnamed protein product [Vitis vinifera]              169   3e-40
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]   169   3e-40
ref|XP_004155661.1| PREDICTED: pentatricopeptide repeat-containi...   158   5e-37

>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial [Vitis vinifera]
          Length = 383

 Score =  171 bits (434), Expect = 6e-41
 Identities = 88/135 (65%), Positives = 104/135 (77%)
 Frame = -3

Query: 405 LTNLVETFKKSAESYRFRSKTHIYKSTILRLASANWFSSIEEILEDQKKYHDIRKEGFAI 226
           L  LV+ FKKS+E  RFR+KT IY+ T+ RLASA  F  IEEILE+QKKY DI +EGFA+
Sbjct: 39  LKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAV 98

Query: 225 RLISLYGKVGMLEHAKKTFDELPELKCERTVKSFNALLTACIESKNYDKVEKLFRELPLK 46
           RLISLYGK GM +HA K FDE+P+ KCER+V SFNALL AC+ SK +DKVE  F ELP K
Sbjct: 99  RLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKVEGFFSELPSK 158

Query: 45  LNVVPDEYSYTIVIQ 1
           L+V PD  SY IVI+
Sbjct: 159 LSVEPDLVSYNIVIK 173


>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Vitis vinifera]
          Length = 382

 Score =  170 bits (430), Expect = 2e-40
 Identities = 87/134 (64%), Positives = 103/134 (76%)
 Frame = -3

Query: 405 LTNLVETFKKSAESYRFRSKTHIYKSTILRLASANWFSSIEEILEDQKKYHDIRKEGFAI 226
           L  LV+ FKKS+E  RFR+KT IY+ T+ RLASA  F  IEEILE+QKKY DI +EGFA+
Sbjct: 39  LKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAV 98

Query: 225 RLISLYGKVGMLEHAKKTFDELPELKCERTVKSFNALLTACIESKNYDKVEKLFRELPLK 46
           RLI+LYGK GM +HA K FDE+P+ KCER+V SFNALL AC+ SK +DKVE  F ELP K
Sbjct: 99  RLITLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSELPSK 158

Query: 45  LNVVPDEYSYTIVI 4
           L+V PD  SY IVI
Sbjct: 159 LSVEPDLVSYNIVI 172


>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  169 bits (428), Expect = 3e-40
 Identities = 84/134 (62%), Positives = 103/134 (76%)
 Frame = -3

Query: 405 LTNLVETFKKSAESYRFRSKTHIYKSTILRLASANWFSSIEEILEDQKKYHDIRKEGFAI 226
           L  LV+ FKKS+E  RFR+KT IY+ T+ RLASA  F  IEEILE+QKKY DI +EGFA+
Sbjct: 47  LKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAV 106

Query: 225 RLISLYGKVGMLEHAKKTFDELPELKCERTVKSFNALLTACIESKNYDKVEKLFRELPLK 46
           RLISLYGK GM +HA K FDE+P+ KCER+V SFNALL AC+ SK +DK++  F+ELP  
Sbjct: 107 RLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKIDGFFQELPGN 166

Query: 45  LNVVPDEYSYTIVI 4
           L VVPD  SY I++
Sbjct: 167 LGVVPDVVSYNIIV 180


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score =  169 bits (428), Expect = 3e-40
 Identities = 87/135 (64%), Positives = 103/135 (76%)
 Frame = -3

Query: 405 LTNLVETFKKSAESYRFRSKTHIYKSTILRLASANWFSSIEEILEDQKKYHDIRKEGFAI 226
           L  LV+ FKKS+E  RFR+KT IY+ T+ RLASA  F  IEEILE+QKKY DI +EGFA+
Sbjct: 39  LKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAV 98

Query: 225 RLISLYGKVGMLEHAKKTFDELPELKCERTVKSFNALLTACIESKNYDKVEKLFRELPLK 46
           RLISLYGK GM +HA K FDE+P+ KCER+V SFN LL AC+ SK +DKVE  F ELP K
Sbjct: 99  RLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNXLLGACVXSKKFDKVEGFFSELPSK 158

Query: 45  LNVVPDEYSYTIVIQ 1
           L+V PD  SY IVI+
Sbjct: 159 LSVEPDLVSYNIVIK 173


>ref|XP_004155661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Cucumis sativus]
          Length = 398

 Score =  158 bits (400), Expect = 5e-37
 Identities = 78/134 (58%), Positives = 99/134 (73%)
 Frame = -3

Query: 405 LTNLVETFKKSAESYRFRSKTHIYKSTILRLASANWFSSIEEILEDQKKYHDIRKEGFAI 226
           L N+V+ F K+ ES RFR K   + ST+  LA    FS IE+I+E QKKY DI+ EGFA 
Sbjct: 54  LQNIVDKFIKNTESQRFRHKKGTFDSTVRLLAVRKKFSLIEDIIEAQKKYEDIKVEGFAT 113

Query: 225 RLISLYGKVGMLEHAKKTFDELPELKCERTVKSFNALLTACIESKNYDKVEKLFRELPLK 46
           RLI LYGK GM  HA+K FDELPEL CERTVKSFN+LL +C++SK +D+VEK+FRE+P +
Sbjct: 114 RLIKLYGKAGMFSHARKLFDELPELNCERTVKSFNSLLASCVKSKEFDQVEKIFREVPQE 173

Query: 45  LNVVPDEYSYTIVI 4
           +++  D  SY IVI
Sbjct: 174 VSIKADVISYNIVI 187