BLASTX nr result

ID: Coptis25_contig00013537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013537
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267282.1| PREDICTED: myosin IB heavy chain [Vitis vini...    92   6e-17
ref|XP_003541574.1| PREDICTED: myosin ID heavy chain-like [Glyci...    91   7e-17
ref|XP_002513600.1| conserved hypothetical protein [Ricinus comm...    89   3e-16
ref|XP_004145919.1| PREDICTED: myosin heavy chain IB-like [Cucum...    89   5e-16
ref|XP_002331824.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13

>ref|XP_002267282.1| PREDICTED: myosin IB heavy chain [Vitis vinifera]
           gi|302143695|emb|CBI22556.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/57 (75%), Positives = 50/57 (87%)
 Frame = -3

Query: 173 NLKEDQEPFMGMKVRRIASLHRDYRGDYLDITSQSSLIKILDKQGDRKVLFADKVLK 3
           N+ EDQEPFMG+KVRR ASLHRDY+GDYLD+ SQ  L+K+L KQGDR+VLFADK LK
Sbjct: 54  NVTEDQEPFMGVKVRRRASLHRDYKGDYLDVPSQPFLMKLLGKQGDRQVLFADKALK 110


>ref|XP_003541574.1| PREDICTED: myosin ID heavy chain-like [Glycine max]
          Length = 214

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 50/87 (57%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
 Frame = -3

Query: 257 RRVQIETP--GDSXXXXXXXXKGGVSSLNLNLKEDQEPFMGMKVRRIASLHRDYRGDYLD 84
           RRVQIE P   D              S N N+ +DQEPFMG+KVRR ASLHRD++GDYL+
Sbjct: 3   RRVQIEDPKYDDVPDADEPEETIRFKSSNSNVSDDQEPFMGIKVRRKASLHRDHKGDYLN 62

Query: 83  ITSQSSLIKILDKQGDRKVLFADKVLK 3
           + S   LIKIL KQGD +VLFAD+VLK
Sbjct: 63  VPSHPFLIKILQKQGDNEVLFADRVLK 89


>ref|XP_002513600.1| conserved hypothetical protein [Ricinus communis]
           gi|223547508|gb|EEF49003.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 226

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/57 (75%), Positives = 49/57 (85%)
 Frame = -3

Query: 173 NLKEDQEPFMGMKVRRIASLHRDYRGDYLDITSQSSLIKILDKQGDRKVLFADKVLK 3
           N+ EDQEPFMG+KVRR ASLHRD +GDYLD+ S S L+KIL KQGD +VLFADKVLK
Sbjct: 47  NVSEDQEPFMGVKVRRKASLHRDIKGDYLDVPSHSYLMKILQKQGDSQVLFADKVLK 103


>ref|XP_004145919.1| PREDICTED: myosin heavy chain IB-like [Cucumis sativus]
           gi|449497302|ref|XP_004160366.1| PREDICTED: myosin heavy
           chain IB-like [Cucumis sativus]
          Length = 225

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/57 (71%), Positives = 49/57 (85%)
 Frame = -3

Query: 173 NLKEDQEPFMGMKVRRIASLHRDYRGDYLDITSQSSLIKILDKQGDRKVLFADKVLK 3
           N+ EDQEPFMG+KVRR ASLHRDY+GDY+D+ S   L+KIL KQG++ VLFADKVLK
Sbjct: 44  NVTEDQEPFMGIKVRRKASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLK 100


>ref|XP_002331824.1| predicted protein [Populus trichocarpa] gi|222875062|gb|EEF12193.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/57 (66%), Positives = 46/57 (80%)
 Frame = -3

Query: 173 NLKEDQEPFMGMKVRRIASLHRDYRGDYLDITSQSSLIKILDKQGDRKVLFADKVLK 3
           N+ +DQEP MG+KV R AS HRD +GDYLD+ S S L+KI  KQGD++VLFADKVLK
Sbjct: 42  NVSDDQEPVMGVKVLRQASRHRDIKGDYLDVPSHSYLMKIFQKQGDKQVLFADKVLK 98


Top