BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013536
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putati...   337   3e-90
ref|XP_002323991.1| predicted protein [Populus trichocarpa] gi|2...   335   8e-90
ref|XP_002300091.1| predicted protein [Populus trichocarpa] gi|2...   335   1e-89
ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit ...   333   3e-89
ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit ...   330   3e-88

>ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis]
           gi|223549455|gb|EEF50943.1| 26S proteasome regulatory
           subunit S3, putative [Ricinus communis]
          Length = 427

 Score =  337 bits (864), Expect = 3e-90
 Identities = 174/239 (72%), Positives = 199/239 (83%), Gaps = 3/239 (1%)
 Frame = -3

Query: 975 GMICIGQKCFRKAHELLHNVVTAPTSALNAISVEALKKYILVSLIQNGQFLKNLP--TSV 802
           GM+CIGQK FRKA ELLHNVVTAP S++NAI+VEA KKYIL SLI  GQF  +LP   S 
Sbjct: 187 GMVCIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILASLIHQGQFSTSLPKYASS 246

Query: 801 VASRTRKVLCQHYYDLGEIYSNGKISELESFVETHREEFERENNLGLVKQVISSVYKRNI 622
            A R  K  CQ Y +L   YS GKI+ELE++V+T+RE+FE +NNLGLVKQV+SS+YKRNI
Sbjct: 247 AAQRNLKNFCQPYIELANSYSTGKIAELETYVQTNREKFESDNNLGLVKQVVSSMYKRNI 306

Query: 621 QRLTQTYLTLSLQDIANRVQLNTPKEAEMHVLQMIQDGEIFATINQKDGMVSFHEDHEQY 442
           QRLTQTYLTLSLQDIAN VQLN+PKEAEMHVLQMIQDGEI+ATINQKDGMV F ED EQY
Sbjct: 307 QRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDPEQY 366

Query: 441 KTCEMIEHIDSSIQRVVALSKKLNAVNEIMSWDAAYLAKAGNDHQRFDFDDLD-LPHRF 268
           KTCEMIEHIDSSIQR++ LSKKL A++E+MS D  YLAKAG + QRFDFDD D +P +F
Sbjct: 367 KTCEMIEHIDSSIQRIMNLSKKLTAMDELMSCDPLYLAKAGRERQRFDFDDFDTVPQKF 425


>ref|XP_002323991.1| predicted protein [Populus trichocarpa] gi|222866993|gb|EEF04124.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  335 bits (860), Expect = 8e-90
 Identities = 173/239 (72%), Positives = 201/239 (84%), Gaps = 3/239 (1%)
 Frame = -3

Query: 975 GMICIGQKCFRKAHELLHNVVTAPTSALNAISVEALKKYILVSLIQNGQFLKNLP--TSV 802
           GMICIGQK F+KA ELLHNVVTAP S++NAI+VEA KKYILVSLIQN QF  +LP  TS 
Sbjct: 184 GMICIGQKHFQKALELLHNVVTAPMSSINAIAVEAFKKYILVSLIQNRQFSTSLPKYTSS 243

Query: 801 VASRTRKVLCQHYYDLGEIYSNGKISELESFVETHREEFERENNLGLVKQVISSVYKRNI 622
            A R  K LCQ Y +L   YS+GK+SELE++++T+RE+FE +NN GLVKQV+SS+YKRNI
Sbjct: 244 AAQRNLKTLCQPYMELASSYSSGKVSELETYIQTNREKFESDNNHGLVKQVVSSMYKRNI 303

Query: 621 QRLTQTYLTLSLQDIANRVQLNTPKEAEMHVLQMIQDGEIFATINQKDGMVSFHEDHEQY 442
           QRLTQTYLTLSLQDIA  VQL++PKEAEMHVLQMIQDGEI+ATINQKDGMV F ED EQY
Sbjct: 304 QRLTQTYLTLSLQDIAKIVQLSSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDPEQY 363

Query: 441 KTCEMIEHIDSSIQRVVALSKKLNAVNEIMSWDAAYLAKAGNDHQRFDFDDLD-LPHRF 268
           K CEMIEHIDSSIQR++ LSKKL AV+E++S D  YLAKAG + QRFDFDD D +P +F
Sbjct: 364 KNCEMIEHIDSSIQRIMTLSKKLTAVDELLSCDPLYLAKAGRERQRFDFDDFDPVPQKF 422


>ref|XP_002300091.1| predicted protein [Populus trichocarpa] gi|222847349|gb|EEE84896.1|
           predicted protein [Populus trichocarpa]
          Length = 423

 Score =  335 bits (858), Expect = 1e-89
 Identities = 170/239 (71%), Positives = 201/239 (84%), Gaps = 3/239 (1%)
 Frame = -3

Query: 975 GMICIGQKCFRKAHELLHNVVTAPTSALNAISVEALKKYILVSLIQNGQFLKNLP--TSV 802
           GMICIGQK F+KA ELLHNVVTAP S++NAI+VEA KKY+LVSLI NGQF  +LP  TS 
Sbjct: 183 GMICIGQKRFQKALELLHNVVTAPMSSINAIAVEAFKKYVLVSLIYNGQFSTSLPKYTSS 242

Query: 801 VASRTRKVLCQHYYDLGEIYSNGKISELESFVETHREEFERENNLGLVKQVISSVYKRNI 622
            A R  K +CQ Y +L   YS GKISELE +++T+RE+F+ +NNLGLVKQV++S+YKRNI
Sbjct: 243 AAQRNLKTICQPYIELANTYSIGKISELEPYIQTNREKFDSDNNLGLVKQVVTSMYKRNI 302

Query: 621 QRLTQTYLTLSLQDIANRVQLNTPKEAEMHVLQMIQDGEIFATINQKDGMVSFHEDHEQY 442
           QRLTQTYLTLSLQDIAN VQL++PKEAEMHVLQMIQDGEI+ATINQ+DGMV F ED EQY
Sbjct: 303 QRLTQTYLTLSLQDIANTVQLSSPKEAEMHVLQMIQDGEIYATINQRDGMVRFLEDPEQY 362

Query: 441 KTCEMIEHIDSSIQRVVALSKKLNAVNEIMSWDAAYLAKAGNDHQRFDFDDLD-LPHRF 268
           KTCEMIEHIDSSIQR++ LSKKL A++E++S D  YLAK G + QRFDFDD D +P +F
Sbjct: 363 KTCEMIEHIDSSIQRIMTLSKKLTAMDELISCDPLYLAKVGRERQRFDFDDFDPVPQKF 421


>ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera]
           gi|296090247|emb|CBI40066.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score =  333 bits (855), Expect = 3e-89
 Identities = 175/239 (73%), Positives = 195/239 (81%), Gaps = 3/239 (1%)
 Frame = -3

Query: 975 GMICIGQKCFRKAHELLHNVVTAPTSALNAISVEALKKYILVSLIQNGQFLKNLP--TSV 802
           GMICIGQK FRKA ELLHNVVTAP S +NAI+VEA KKYILVSLI NGQF    P  TS 
Sbjct: 184 GMICIGQKRFRKALELLHNVVTAPMSTINAIAVEAYKKYILVSLIHNGQFSTTFPKYTSS 243

Query: 801 VASRTRKVLCQHYYDLGEIYSNGKISELESFVETHREEFERENNLGLVKQVISSVYKRNI 622
           VA R  K   Q Y DL   YS+GKISE E  ++T+RE+FE + NLGLVKQV+SS+YKRNI
Sbjct: 244 VAQRNLKNFSQPYLDLANSYSSGKISEPEKCIQTNREKFEADKNLGLVKQVVSSMYKRNI 303

Query: 621 QRLTQTYLTLSLQDIANRVQLNTPKEAEMHVLQMIQDGEIFATINQKDGMVSFHEDHEQY 442
           QRLTQTYLTLSLQDIAN VQLN+PKEAEMHVLQMIQDGEIFATINQKDGMV F ED EQY
Sbjct: 304 QRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFQEDPEQY 363

Query: 441 KTCEMIEHIDSSIQRVVALSKKLNAVNEIMSWDAAYLAKAGNDHQRFDFDDLD-LPHRF 268
           KTCEMIEHIDSSIQR++ LSKKL  ++E++S D  YLAKAG + QRFDFDD D +P +F
Sbjct: 364 KTCEMIEHIDSSIQRIMTLSKKLTTMDELISCDPLYLAKAGRERQRFDFDDYDTVPQKF 422


>ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2
           [Glycine max]
          Length = 423

 Score =  330 bits (847), Expect = 3e-88
 Identities = 168/238 (70%), Positives = 198/238 (83%), Gaps = 2/238 (0%)
 Frame = -3

Query: 975 GMICIGQKCFRKAHELLHNVVTAPTSALNAISVEALKKYILVSLIQNGQFLKNLP--TSV 802
           GMICIGQK F+KA +LLHNVVTAP S +NAI+VEA KKYILVSLI++GQF  +LP  +S 
Sbjct: 184 GMICIGQKRFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVSLIRHGQFSTSLPKYSSS 243

Query: 801 VASRTRKVLCQHYYDLGEIYSNGKISELESFVETHREEFERENNLGLVKQVISSVYKRNI 622
            A R  K  CQ Y +L   Y  GKI+ELE++V+ + E+FE +NNLGLVKQV+SS+YKRNI
Sbjct: 244 TAQRNLKNFCQPYVELANSYGTGKIAELEAYVKANAEKFESDNNLGLVKQVVSSMYKRNI 303

Query: 621 QRLTQTYLTLSLQDIANRVQLNTPKEAEMHVLQMIQDGEIFATINQKDGMVSFHEDHEQY 442
           QRLTQTYLTLSLQDIAN VQLN+PKEAEMHVLQMIQDGEI+ATINQKDGMV F ED EQY
Sbjct: 304 QRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDPEQY 363

Query: 441 KTCEMIEHIDSSIQRVVALSKKLNAVNEIMSWDAAYLAKAGNDHQRFDFDDLDLPHRF 268
           KTCEMIEHIDSSIQR++ALS+KL A +E +S D  YL+KAG + QR+DFDD D+P +F
Sbjct: 364 KTCEMIEHIDSSIQRIMALSRKLTATDEQISCDQLYLSKAGRERQRYDFDDFDVPQKF 421