BLASTX nr result

ID: Coptis25_contig00013532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013532
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAI96820.1| SNF1-related protein kinase regulatory beta subu...    97   1e-18
gb|AFK35416.1| unknown [Medicago truncatula]                           95   7e-18
gb|ACJ84645.1| unknown [Medicago truncatula]                           95   7e-18
ref|XP_003617136.1| SNF1-related protein kinase regulatory beta ...    95   7e-18
ref|XP_003519491.1| PREDICTED: SNF1-related protein kinase regul...    94   1e-17

>emb|CAI96820.1| SNF1-related protein kinase regulatory beta subunit 1 [Pisum
           sativum]
          Length = 279

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 5/73 (6%)
 Frame = +3

Query: 6   SNSPP-----SRSPLMFAPQLPVAPLQRGDAPPTFNHIWINDPHNSLDAPQEQGIPTLIT 170
           +NSPP     SRSP++F PQ+P+APLQRG+ PP  N +W N+PH  +  P EQGIP +IT
Sbjct: 41  ANSPPQSPRRSRSPILFGPQVPLAPLQRGNGPPFLNQMWQNEPHGIVHQPPEQGIPVMIT 100

Query: 171 WTFGGNTVAVQGS 209
           W +GGN+VAV+GS
Sbjct: 101 WNYGGNSVAVEGS 113


>gb|AFK35416.1| unknown [Medicago truncatula]
          Length = 276

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 5/73 (6%)
 Frame = +3

Query: 6   SNSPP-----SRSPLMFAPQLPVAPLQRGDAPPTFNHIWINDPHNSLDAPQEQGIPTLIT 170
           +NSPP     SRSP++F PQ+P+APLQRG+ PP  N +W N+PH  ++   EQGIP +IT
Sbjct: 38  ANSPPQSPRRSRSPILFGPQVPLAPLQRGNGPPFLNQMWQNEPHGIVNQAPEQGIPVMIT 97

Query: 171 WTFGGNTVAVQGS 209
           W +GGN+VAV+GS
Sbjct: 98  WNYGGNSVAVEGS 110


>gb|ACJ84645.1| unknown [Medicago truncatula]
          Length = 219

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 5/73 (6%)
 Frame = +3

Query: 6   SNSPP-----SRSPLMFAPQLPVAPLQRGDAPPTFNHIWINDPHNSLDAPQEQGIPTLIT 170
           +NSPP     SRSP++F PQ+P+APLQRG+ PP  N +W N+PH  ++   EQGIP +IT
Sbjct: 38  ANSPPQSPRRSRSPILFGPQVPLAPLQRGNGPPFLNQMWQNEPHGIVNQAPEQGIPVMIT 97

Query: 171 WTFGGNTVAVQGS 209
           W +GGN+VAV+GS
Sbjct: 98  WNYGGNSVAVEGS 110


>ref|XP_003617136.1| SNF1-related protein kinase regulatory beta subunit [Medicago
           truncatula] gi|32364486|gb|AAO61676.1| AKIN beta1
           [Medicago truncatula] gi|355518471|gb|AET00095.1|
           SNF1-related protein kinase regulatory beta subunit
           [Medicago truncatula]
          Length = 276

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 5/73 (6%)
 Frame = +3

Query: 6   SNSPP-----SRSPLMFAPQLPVAPLQRGDAPPTFNHIWINDPHNSLDAPQEQGIPTLIT 170
           +NSPP     SRSP++F PQ+P+APLQRG+ PP  N +W N+PH  ++   EQGIP +IT
Sbjct: 38  ANSPPQSPRRSRSPILFGPQVPLAPLQRGNGPPFLNQMWQNEPHGIVNQAPEQGIPVMIT 97

Query: 171 WTFGGNTVAVQGS 209
           W +GGN+VAV+GS
Sbjct: 98  WNYGGNSVAVEGS 110


>ref|XP_003519491.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           beta-1-like [Glycine max]
          Length = 283

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 5/73 (6%)
 Frame = +3

Query: 6   SNSPP-----SRSPLMFAPQLPVAPLQRGDAPPTFNHIWINDPHNSLDAPQEQGIPTLIT 170
           +NSPP     SRSP++F PQ+P+APLQRG+ PP  N +W N+ H  ++ P EQGIP +IT
Sbjct: 45  ANSPPHSPRRSRSPILFGPQVPLAPLQRGNGPPFLNQMWQNESHGIVNHPPEQGIPVMIT 104

Query: 171 WTFGGNTVAVQGS 209
           W +GGN VAV+GS
Sbjct: 105 WNYGGNNVAVEGS 117


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