BLASTX nr result

ID: Coptis25_contig00013528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013528
         (1132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2...   246   8e-63
emb|CBI26021.3| unnamed protein product [Vitis vinifera]              122   2e-25
emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]   119   1e-24
ref|XP_002453394.1| hypothetical protein SORBIDRAFT_04g005220 [S...   112   2e-22
emb|CBG76276.1| OO_Ba0005L10-OO_Ba0081K17.27 [Oryza officinalis]      106   1e-20

>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
            predicted protein [Populus trichocarpa]
          Length = 426

 Score =  246 bits (628), Expect = 8e-63
 Identities = 148/378 (39%), Positives = 216/378 (57%), Gaps = 1/378 (0%)
 Frame = +2

Query: 2    LSSSTGNVYFDLRTLFGINYDRNYLSKNSNSLWEGKYRFINAVDQIMQLYRSPKLYSFKI 181
            LS    ++ FD+ TLFG +              E   +F+ AVDQ++   R PK+ + K+
Sbjct: 38   LSPPLSHLQFDVFTLFGTH-------------GESSSKFVTAVDQVLLACRGPKIGTVKV 84

Query: 182  CYCLGNESASHIDRWISFALRMQVEKIDLEFPCIPGGCENYKFPCHLLPHGKASHLKHXX 361
             + LG++ A H+DRW+SF+  MQVEKI  +F C P  C +Y FPCH+LP  KASHLKH  
Sbjct: 85   RFGLGDDHAFHVDRWVSFSSAMQVEKIAFDFSCSPKSCGSYNFPCHILPADKASHLKH-- 142

Query: 362  XXXXXXXXXXXXXXXXXDFTNRFISLKTLDLISVPLDRSAFDRLFSGCINLEWMRLRECR 541
                              FT++   L+TLDL  VPLD+S  D + S C  L  +R+  C 
Sbjct: 143  -----LCLVSCTLRLSPKFTSQLNPLRTLDLDGVPLDQSGLDIITSACPKLTLLRMIGCG 197

Query: 542  LPESLFIRGNLLCLKSLVLDRCDGPMEVEVSSIYLTSFQYIGMTKNLRFVGAVSIEKVHL 721
            LP+ + I G LLCLK+L++   D  + VE+ SI L  F++ G  + L FV    ++K  +
Sbjct: 198  LPKIVCIHGQLLCLKTLIIH--DSLISVELKSINLEIFEFFGHPRKLTFVDVPHLKKALV 255

Query: 722  WFLSPFRRGTYYMFGGLAKELPDLQVLSLVLYTRQVIPIPANMTKFSHLKELTLVVFLSS 901
              L  +RR T  +   LAK+LP LQ LSL++   +V+P+PA   KF  LK+L L+++   
Sbjct: 256  RSLFIYRR-TSPICNALAKDLPQLQFLSLIV-KDEVLPLPATSPKFISLKQLDLLIWPFI 313

Query: 902  DFDLLSIASVLNASPCLQKFHLSL-QHGGFRVPRVERDYSKQVYYQLKEVEISGFLDRCD 1078
            D DLL++  +LNASP L+   L + + G  R     R+YS+  +  LKEV++ GF D+ +
Sbjct: 314  DSDLLTVIYLLNASPLLEILQLKIGRQGEGRSNGERREYSRHTHSHLKEVKMEGFRDKWN 373

Query: 1079 SFELPIHLLNSAIGLERM 1132
            + EL I+LL + I LERM
Sbjct: 374  AMELAIYLLKNTIALERM 391


>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score =  122 bits (306), Expect = 2e-25
 Identities = 115/392 (29%), Positives = 174/392 (44%), Gaps = 24/392 (6%)
 Frame = +2

Query: 23   VYFDLRTLFGINYDRNYLSKNS---NSLWEGKYRFINAVDQIMQLYRSP--KLYSFKICY 187
            ++FD  ++ GI      +S N    NS  +   +F+  VDQ M  YRS   K+ SF I +
Sbjct: 58   LWFDAASVLGIGDCSTSMSGNQPELNSQMQSS-KFVERVDQFMY-YRSQGRKINSFSIHF 115

Query: 188  CLGNESASHIDRWISFALRMQVEKIDLEFP-----------CIPGGCENYKFPCHL--LP 328
             LG E  SHID+WI+ A+   VE IDL+                   + Y+FPC L  +P
Sbjct: 116  PLGKEFMSHIDQWITCAVMKGVENIDLDLSEYFSFNLKRDDTSSTAFQIYEFPCRLFSVP 175

Query: 329  HGKASHLKHXXXXXXXXXXXXXXXXXXXDFTNRFISLKTLDLISVPLDRSAFDRLFSGCI 508
             G+ + LKH                     +N   SL T+DL  V +       L S C 
Sbjct: 176  GGRCT-LKHLRLASCHLSALPS--------SNTLTSLITVDLQRVNISDQQLQDLLSTCS 226

Query: 509  NLEWMRLRECRLPESLFIRGNLLCLKSLVLDRCDGPMEVEVSSIYLTSFQYIGMTKNLRF 688
            +LEW+ L  C    +L      L LK L +  C     +E+ +  L +F+Y G   +  F
Sbjct: 227  HLEWLSLCVCNGLVNLSFSALNLQLKFLSIKNCFRLETIEIHAADLVTFKYGGHLPSFSF 286

Query: 689  VGAVSIEKVHLWFL--SPFRRGTYYMFGGLAKELPDLQVLSLV-LYTRQVIPIPANMTKF 859
                 + K  L F   S    G  Y      ++LP L+ L L+ + T + + +P N   F
Sbjct: 287  KNVPKLAKASLEFFIKSSRTEGVMYALTRFPQDLPQLETLKLLSVLTLKKLQLPENGPTF 346

Query: 860  SHLKELTLVVF-LSSDFDLLSIASVLNASPCLQKFHLSLQHGGF--RVPRVERDYSKQVY 1030
            +++K+  L VF    D DL  I  +L A P LQK  L+L    F  +   +ER   +  +
Sbjct: 347  TNVKQFELTVFPFDDDDDLSWIGYILKAFPLLQKLELNLFSPSFTKQPKEIERFLPECPH 406

Query: 1031 YQLKEVEISGFLDRCDSFELPIHLLNSAIGLE 1126
              L  ++I+GF       +L  +LL++ + LE
Sbjct: 407  RHLSILQINGFYGNQHEVDLLKYLLHNLVALE 438


>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
          Length = 1789

 Score =  119 bits (299), Expect = 1e-24
 Identities = 114/391 (29%), Positives = 172/391 (43%), Gaps = 23/391 (5%)
 Frame = +2

Query: 23   VYFDLRTLFGINYDRNYLSKNSNSLWEG--KYRFINAVDQIMQLYRS--PKLYSFKICYC 190
            ++FD  ++ GI      +S N   L       +F+  VDQ M  YRS  PK+ SF I + 
Sbjct: 1360 LWFDAASVLGIGDCSXSMSGNQPELNSQMQSXKFVERVDQFMY-YRSQGPKINSFSIHFP 1418

Query: 191  LGNESASHIDRWISFALRMQVEKIDLEF-----------PCIPGGCENYKFPCHL--LPH 331
            LG E  SHID+WI+ A+   VE IDL+                   + Y+FPC L  +P 
Sbjct: 1419 LGKEFMSHIDQWITCAVMKGVENIDLDLSEYFSFNLKRDDTSSTAFQIYEFPCRLFSVPG 1478

Query: 332  GKASHLKHXXXXXXXXXXXXXXXXXXXDFTNRFISLKTLDLISVPLDRSAFDRLFSGCIN 511
            G+ + LKH                     +N   SL T+DL  V +       L S C +
Sbjct: 1479 GRCT-LKHLRLASCHLSALPS--------SNTLTSLITVDLQRVNISDQQLQDLLSTCSH 1529

Query: 512  LEWMRLRECRLPESLFIRGNLLCLKSLVLDRCDGPMEVEVSSIYLTSFQYIGMTKNLRFV 691
            LE + L  C    +L      L LK L +  C     +E+ +  L +F+Y G   +  F 
Sbjct: 1530 LERLSLCVCNGLVNLSFSALNLQLKFLSIKNCFRLETIEIHAADLVTFKYGGHLPSFSFK 1589

Query: 692  GAVSIEKVHLWFL--SPFRRGTYYMFGGLAKELPDLQVLSLV-LYTRQVIPIPANMTKFS 862
                + K  L F   S    G  Y      ++LP L+ L L+ + T + + +P N   F+
Sbjct: 1590 NVPKLAKASLEFFIKSSRTEGVMYALTRFPQDLPQLETLKLLSVLTLKKLQLPENGPTFT 1649

Query: 863  HLKELTLVVF-LSSDFDLLSIASVLNASPCLQKFHLSLQHGGF--RVPRVERDYSKQVYY 1033
            ++K+  L VF    D DL  I  +L A P LQK  L+L    F  +   +ER   +  + 
Sbjct: 1650 NIKQFELTVFPFDDDDDLSWIGYILKAFPLLQKLELNLFSPSFTKQPKEIERFLPECPHR 1709

Query: 1034 QLKEVEISGFLDRCDSFELPIHLLNSAIGLE 1126
             L  ++I+GF       +L  +LL++ + LE
Sbjct: 1710 HLSILQINGFYGNQHEVDLLKYLLHNLVALE 1740


>ref|XP_002453394.1| hypothetical protein SORBIDRAFT_04g005220 [Sorghum bicolor]
            gi|241933225|gb|EES06370.1| hypothetical protein
            SORBIDRAFT_04g005220 [Sorghum bicolor]
          Length = 494

 Score =  112 bits (280), Expect = 2e-22
 Identities = 102/397 (25%), Positives = 171/397 (43%), Gaps = 32/397 (8%)
 Frame = +2

Query: 38   RTLFGINYDRNYLSKNSNSLWEGKY------RFINAVDQIMQLYRSPKLYSFKICYCLGN 199
            R+   +N+D   + K      +G Y       F+  VD ++Q +    +   KI + L +
Sbjct: 34   RSHTNLNFDTGTMRKGYFRPSKGYYSGLKDNEFVTRVDTVVQQHNGTGVEHMKIRFRLHS 93

Query: 200  ESASHIDRWISFALRMQVEKIDLEFPCIPGGC-----------------ENYKFPCHLLP 328
            + A HID W+S A+  + ++  +    + GG                  E Y FP     
Sbjct: 94   KHADHIDSWVSVAIASKTKEFVIN---LSGGSRGIFFLRGGRIRRMVGEEPYSFPSQFFS 150

Query: 329  HGKASHLKHXXXXXXXXXXXXXXXXXXXDFTNRFISLKTLDLISVPLDRSAFDRLFSGCI 508
                SHL+                    DF    ++LK+L L+ V +       + S C 
Sbjct: 151  PNNCSHLR-------CLELWSVSLQLPSDFKG-CLNLKSLTLVDVSITDEDVQCILSTCN 202

Query: 509  NLEWMRLRECRLPESLFIRGNLLCLKSLVLDRCDGPMEVEVSSIYLTSFQYIGMTKNLRF 688
             LE++ +  C +  S+ +   L  L  LV+D C    E+E+ +  LT+FQY G T  L+F
Sbjct: 203  LLEFLEISYCSMVTSIRMLHPLDRLMHLVVDICRKLQEIEL-NCSLTTFQYSGRTVPLKF 261

Query: 689  VGAVSIEKVHLWFLSPFRRGTYYMFGGLAKELPDLQVLSLVLYTRQVIPIPANMTKFSHL 868
                 +  +++ FL+  +    YM  G     P L+ L+L  Y  +   +P    KF+ L
Sbjct: 262  ASTSRLTNINVVFLTD-QSALSYMVTGFPSTSPRLETLTLYCYEHERTLVPEGPFKFTCL 320

Query: 869  KELTL-VVFL---SSDFDLLSIASVLNASPCLQKFHLSLQHGGFRVPRVERDYSKQV--- 1027
            ++L L +VF    + + D+L  A +L  +P ++K  L +       P  + D   ++   
Sbjct: 321  RDLRLDLVFAGKGTRNVDVLDYAYLLEIAPFMEKMELRMWIRWHHQPYCKEDGELRIGLP 380

Query: 1028 --YYQLKEVEISGFLDRCDSFELPIHLLNSAIGLERM 1132
              +  LK V ISGF    D  EL +H+L S + LE+M
Sbjct: 381  HQHAHLKYVRISGFFGHKDQVELALHILGSCMVLEKM 417


>emb|CBG76276.1| OO_Ba0005L10-OO_Ba0081K17.27 [Oryza officinalis]
          Length = 504

 Score =  106 bits (264), Expect = 1e-20
 Identities = 92/371 (24%), Positives = 162/371 (43%), Gaps = 26/371 (7%)
 Frame = +2

Query: 98   WEGKYRFINAVDQIMQLYRSPKLYSFKICYCLGNESASHIDRWISFALRMQVEKIDLEFP 277
            W   Y FI  VD +++ +    +   +I + L ++ A HIDRW++F +  + +++ +   
Sbjct: 78   WLRDYEFITRVDAVLRQHSGMGVQRMEIKFRLHSKHADHIDRWVNFVIASKTKELVINLS 137

Query: 278  CIPGGC--------------ENYKFPCHLLPHGKASHLKHXXXXXXXXXXXXXXXXXXXD 415
                G                 Y  P  LL     S+L+                    D
Sbjct: 138  GHDKGSFFTELSQGIRIIKEPPYNLPSQLLSPSYGSYLR-------CLELTTVSLQLPAD 190

Query: 416  FTNRFISLKTLDLISVPLDRSAFDRLFSGCINLEWMRLRECRLPESLFIRGNLLCLKSLV 595
            F   F++LK L L+ + +       + S C  LE++ +  CR+  S+ +   L  LK LV
Sbjct: 191  FKG-FLNLKILSLVDMSITDEDVQCMLSKCNLLEFLDISYCRMVTSIRMLHPLDRLKHLV 249

Query: 596  LDRCDGPMEVEVSSIYLTSFQYIGMTKNLRFVGAVSIEKVHLWFLSPFRRGTYYMFGGLA 775
            +D C    E+E+ +   T+ ++ G    L F     +  +++ F++ ++    Y+  G  
Sbjct: 250  VDNCRNLKEIEL-NCSPTTLKFSGTMVPLIFASTSRLTNINIVFIT-YQSALSYIITGFP 307

Query: 776  KELPDLQVLSLVLYTRQVIPIPANMTKFSHLKELTLVVFLSS-----DFDLLSIASVLNA 940
              LP L+ L+L    R+   +P    KF++L+ L L + LS        ++L  A +L  
Sbjct: 308  STLPRLETLTLHCAERERTIVPEGPFKFTYLRNLRLELVLSGHENTRKTNVLDYAYILEI 367

Query: 941  SPCLQKFHLSLQHGGFR-VPRVERDYSKQV------YYQLKEVEISGFLDRCDSFELPIH 1099
            +P ++   LS+     R  P  E D   ++      +  LK V ISGF    D  EL +H
Sbjct: 368  APFMETLELSMWAMNCRHRPYREEDGELRIVGPPHQHAHLKSVRISGFFGHKDQVELALH 427

Query: 1100 LLNSAIGLERM 1132
            +L S++ LE+M
Sbjct: 428  ILRSSVVLEKM 438


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