BLASTX nr result

ID: Coptis25_contig00013517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013517
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_175519.1| uncharacterized protein [Arabidopsis thaliana] ...   193   4e-47
ref|XP_002311900.1| predicted protein [Populus trichocarpa] gi|2...   192   9e-47
ref|XP_003597708.1| hypothetical protein MTR_2g101430 [Medicago ...   189   1e-45
ref|XP_002894294.1| hypothetical protein ARALYDRAFT_892069 [Arab...   188   2e-45
emb|CBI18442.3| unnamed protein product [Vitis vinifera]              174   2e-41

>ref|NP_175519.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12320781|gb|AAG50536.1|AC079828_7 hypothetical
           protein [Arabidopsis thaliana]
           gi|34146854|gb|AAQ62435.1| At1g51080 [Arabidopsis
           thaliana] gi|51969056|dbj|BAD43220.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332194499|gb|AEE32620.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 285

 Score =  193 bits (491), Expect = 4e-47
 Identities = 117/250 (46%), Positives = 144/250 (57%), Gaps = 13/250 (5%)
 Frame = -3

Query: 799 SVSTITSSHPSKLITQRNTISCTITHARDKIIDFGKHKGRMLGTLPSKYLKWVSKNLRAR 620
           S + I S++ SK + ++  I  T+  ARD IIDFGKHKG+MLGTLPS YLKWVSKNLRA 
Sbjct: 38  SSNGIFSTNQSKPLIKKLQIIETLA-ARDTIIDFGKHKGKMLGTLPSSYLKWVSKNLRAG 96

Query: 619 DFEEWAKLADEVLLDPVYKDRLEWEFAENLLTGDHGSSSSTR----------NESTVEEL 470
            FE WAKLADEVL D VYKDR EWEFAE +L   HGS  S R            ++V  L
Sbjct: 97  VFEYWAKLADEVLEDDVYKDRTEWEFAEKIL---HGSDESMRALTSVRKSREEVNSVSML 153

Query: 469 VEFSERFGWDNEDKIGWSRVDFSLLGTSKGGRIPRRNFSKSGEFXXXXXXXXXXXXXXXX 290
           +E SERFGWDNEDKIGWS+++F LLGTSKGGRIPR   +   E                 
Sbjct: 154 LEISERFGWDNEDKIGWSKINFELLGTSKGGRIPRLRKANEEEEERGEMVRRREIKKKEE 213

Query: 289 XXXXXXXVXXXXXXXXXXXXXXXXXGKMDSLEEKKNVGNQEEV---MVNKVYNPFPGRES 119
                                      ++  E+K  +G  E+V   +  K+ +PFPGRES
Sbjct: 214 EEDENGWRRKQRRERMRQSLGRDDGKTVNRSEQKGVLGKLEDVEKQLEPKIQSPFPGRES 273

Query: 118 LIKKVISGRR 89
           L+KKV++ RR
Sbjct: 274 LLKKVMNKRR 283


>ref|XP_002311900.1| predicted protein [Populus trichocarpa] gi|222851720|gb|EEE89267.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  192 bits (488), Expect = 9e-47
 Identities = 94/139 (67%), Positives = 111/139 (79%), Gaps = 6/139 (4%)
 Frame = -3

Query: 742 ISCTITHARDKIIDFGKHKGRMLGTLPSKYLKWVSKNLRARDFEEWAKLADEVLLDPVYK 563
           +  T T   D++IDFGK+KG+MLG+LPS YLKWVSKNLRA DFE WAKLAD+VL DPVYK
Sbjct: 33  LKITTTPITDRVIDFGKYKGKMLGSLPSTYLKWVSKNLRAGDFEHWAKLADQVLQDPVYK 92

Query: 562 DRLEWEFAENLLTGDH-----GSSSSTRN-ESTVEELVEFSERFGWDNEDKIGWSRVDFS 401
           DRLEWE A+  L G++     GSSS +RN +S V  L+E SERFGWDNEDK+GWSRV+F 
Sbjct: 93  DRLEWELADTALNGNNNRSISGSSSLSRNDDSAVSRLLEISERFGWDNEDKVGWSRVNFE 152

Query: 400 LLGTSKGGRIPRRNFSKSG 344
           LLGTSKGG+IPRR+ S SG
Sbjct: 153 LLGTSKGGKIPRRSSSSSG 171


>ref|XP_003597708.1| hypothetical protein MTR_2g101430 [Medicago truncatula]
           gi|355486756|gb|AES67959.1| hypothetical protein
           MTR_2g101430 [Medicago truncatula]
          Length = 273

 Score =  189 bits (479), Expect = 1e-45
 Identities = 107/226 (47%), Positives = 137/226 (60%), Gaps = 13/226 (5%)
 Frame = -3

Query: 721 ARDKIIDFGKHKGRMLGTLPSKYLKWVSKNLRARDFEEWAKLADEVLLDPVYKDRLEWEF 542
           ARD++IDFGK+KG+MLG+LPS YLKWVSKNLRAR+FEEWA LAD+VLLDP+YKDR+EWEF
Sbjct: 47  ARDRVIDFGKYKGKMLGSLPSSYLKWVSKNLRAREFEEWAILADQVLLDPIYKDRIEWEF 106

Query: 541 AENLLTGDHGSSSSTRNESTVE-ELVEFSERFGWDNEDKIGWSRVDFSLLGTSKGGRIPR 365
           A N+L G++ SS + ++    + EL + SERFGWDN DK+GWS+VDF LLGTSKGGRIPR
Sbjct: 107 ALNVLNGNNISSGAAKSIGAADSELQKISERFGWDNLDKVGWSKVDFDLLGTSKGGRIPR 166

Query: 364 R-NFSKSGEFXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXGKMDS---- 200
             NFS S                                             KM S    
Sbjct: 167 LVNFSDSDANTNTQPNQPPATSIIGSNGSNSSSSSSSSSSSRTKRMERRARQKMRSRTTN 226

Query: 199 ---LEEKKNVGNQEEVMVNK----VYNPFPGRESLIKKVISGRRVL 83
               ++  NV + EEV  +     + NPFPGR++L++K I+   +L
Sbjct: 227 EAQQQKDDNVVDIEEVEDDNINLAIVNPFPGRQALLRKAINHGSIL 272


>ref|XP_002894294.1| hypothetical protein ARALYDRAFT_892069 [Arabidopsis lyrata subsp.
           lyrata] gi|297340136|gb|EFH70553.1| hypothetical protein
           ARALYDRAFT_892069 [Arabidopsis lyrata subsp. lyrata]
          Length = 288

 Score =  188 bits (477), Expect = 2e-45
 Identities = 116/255 (45%), Positives = 141/255 (55%), Gaps = 16/255 (6%)
 Frame = -3

Query: 805 SPSVSTITSSHPSKLITQRNTISCTITHARDKIIDFGKHKGRMLGTLPSKYLKWVSKNLR 626
           S S     ++ P  L+ +   I      ARD IIDFGKHKG+MLGTLPS YLKWVSKNLR
Sbjct: 37  SSSNRIFPTNQPKPLVKKLQIIETLA--ARDTIIDFGKHKGKMLGTLPSSYLKWVSKNLR 94

Query: 625 ARDFEEWAKLADEVLLDPVYKDRLEWEFAENLLTGDHGSSSSTRNESTVEE--------- 473
           A D E WAKLADEVL D VYKDR EWE AE +L   HGS  S R  ++V++         
Sbjct: 95  AGDSEYWAKLADEVLEDDVYKDRTEWEVAEKIL---HGSDESMRALTSVKKSREEVNSVS 151

Query: 472 -LVEFSERFGWDNEDKIGWSRVDFSLLGTSKGGRIPR---RNFSKSGEFXXXXXXXXXXX 305
            L+E SERFGWDNEDKIGWS+++F LLGTSKGGRIPR    N  +  E            
Sbjct: 152 MLLEISERFGWDNEDKIGWSKINFELLGTSKGGRIPRLRKMNEEEEEEEERGEIVRRREI 211

Query: 304 XXXXXXXXXXXXVXXXXXXXXXXXXXXXXXGKMDSLEEKKNVGNQEEV---MVNKVYNPF 134
                                           ++  E+K  +G  EEV   +  K+ +PF
Sbjct: 212 KKKEEEEDENGWRRRQRRERMRQSLGRDDGKTVNRTEQKGVLGKLEEVEKKLEPKIQSPF 271

Query: 133 PGRESLIKKVISGRR 89
           PGRESL+KKV++ RR
Sbjct: 272 PGRESLLKKVMNRRR 286


>emb|CBI18442.3| unnamed protein product [Vitis vinifera]
          Length = 231

 Score =  174 bits (441), Expect = 2e-41
 Identities = 103/231 (44%), Positives = 128/231 (55%)
 Frame = -3

Query: 775 HPSKLITQRNTISCTITHARDKIIDFGKHKGRMLGTLPSKYLKWVSKNLRARDFEEWAKL 596
           H S L  + + I  + T   D++I FGKHKG+MLGTLPS YLKWVSKNLRA D E+WAKL
Sbjct: 7   HSSTLPPKTHIIKAS-TPPTDRVIVFGKHKGKMLGTLPSTYLKWVSKNLRAGDTEQWAKL 65

Query: 595 ADEVLLDPVYKDRLEWEFAENLLTGDHGSSSSTRNESTVEELVEFSERFGWDNEDKIGWS 416
           AD+VL  P+Y+DRLEWE AE LLTG+  +S    N +  EEL   SE FGWDN D +GWS
Sbjct: 66  ADQVLQHPLYQDRLEWEQAERLLTGNDAASRGVENPA--EELAHLSETFGWDNGDGVGWS 123

Query: 415 RVDFSLLGTSKGGRIPRRNFSKSGEFXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXX 236
           RVDF LLGTSK GRIPR    + G                                    
Sbjct: 124 RVDFGLLGTSKTGRIPRVGSERGG--GEVAEREKNGGSGGGRARRRERSRMKGRMGIVEK 181

Query: 235 XXXXXXXGKMDSLEEKKNVGNQEEVMVNKVYNPFPGRESLIKKVISGRRVL 83
                     D+ +E + V N+     + V +PFPGR+ L+KKV+  +R L
Sbjct: 182 SGDSFGNTGGDAGDEDRTVENRHRPH-SPVRSPFPGRQGLLKKVLERKRFL 231


Top