BLASTX nr result

ID: Coptis25_contig00013508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013508
         (1735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16338.3| unnamed protein product [Vitis vinifera]              151   6e-34
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...   146   1e-32
ref|XP_004139555.1| PREDICTED: uncharacterized protein LOC101222...   142   3e-31
dbj|BAG70995.1| uncharacterized protein [Musa balbisiana] gi|199...   114   1e-22
gb|AFW86279.1| hypothetical protein ZEAMMB73_952056 [Zea mays]        103   2e-19

>emb|CBI16338.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  151 bits (381), Expect = 6e-34
 Identities = 79/168 (47%), Positives = 99/168 (58%), Gaps = 6/168 (3%)
 Frame = -2

Query: 486 PDQTHLDNTAEISTPLATDGSEHGSRDGL------GLNEESCKMLRLEESSVNTQTECDH 325
           P Q       +I+  L  D S H  R  L      G  E+    ++ +E  +++QT  DH
Sbjct: 386 PSQEFCSCNTKINQDL-NDSSAHKDRGELEGCMTTGYAEKCESKIKEKEFHLDSQTGDDH 444

Query: 324 NACVVXXXXXXXXXXXXXXXKRNYHLDCLDPPFKVVPLGVWHCSQCIKKKIQFGVHSVSK 145
           N CVV               KR+YHL CLDPP   +P G+WHC  C+KKK + GVH+VS+
Sbjct: 445 NTCVVCKLGGKLLCCDGKGCKRSYHLACLDPPLGEIPPGIWHCMLCVKKKTELGVHAVSE 504

Query: 144 GVESLWDIREEEVSDCEGIQKQKKYLVKYKGLAHVHNKWILEHQLLLE 1
           GVES+WD RE E+   EG+QKQK+Y VKYKGLAHVHN WI E QLLLE
Sbjct: 505 GVESIWDTREVELPSAEGVQKQKQYFVKYKGLAHVHNHWIPESQLLLE 552



 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 92/344 (26%), Positives = 134/344 (38%), Gaps = 9/344 (2%)
 Frame = -2

Query: 1734 RKSERVEKQKMPSPLXXXXXXXXXXXXXXXXXXXXXXGLELLDTKNKKXXXXXXXXXXXX 1555
            RKSERVEKQ+MPSP                            + ++KK            
Sbjct: 80   RKSERVEKQRMPSPSRRSERGKNHQSPSSSGSKKSEKTSGSSEMRHKKQKREKSVKEVTL 139

Query: 1554 XXXXXXXXNGQTDRRPAHLL----LGKKRLDARSYRESLRQEQPTKNQEADLNKKKLEEH 1387
                      +  +   H L    + KKR+DAR+YR  LR+    K  +ADL  K + + 
Sbjct: 140  EAR-------KVSKNEEHDLESVQVKKKRMDARAYRALLRR----KVNDADLGGK-MRKP 187

Query: 1386 DDTSQGDTDHTEAGTSKEVKDG-ADCV-RNMEEVEEKDAGEGSKVAVEGPSSGLRKLDLG 1213
            D   Q D+  +    SK+V+DG  +C  R  +E++EK      +   E  +  LR     
Sbjct: 188  DKLFQEDSSDSSDSGSKQVEDGRTECSGRREDELKEKSQDRARERPAEESNCSLRTFTTE 247

Query: 1212 MSNVLGEVEPSLVGRKRRRHSDELCESNNEQGSPVSKCEDNSLESSKEVCAEAETAQLDC 1033
                 G VE S         S   C     +       E N +E +K     AE  +   
Sbjct: 248  ALENHGRVEFS--------SSQNGCLKGTFEHE-----ERNPVEEAKGTTDNAERIETHS 294

Query: 1032 SARENCPN---VSITSEGRSRSGDQCLKRASDVGNSKRKRKRKPEGSNSDSDASVPAANE 862
            S  E       +  TS  RS  G   LK            KRK    + DSDAS    ++
Sbjct: 295  SPAEKLQMPELIDSTSNRRSLDGGDGLKLTPV--------KRKRNTLDLDSDASERVPSK 346

Query: 861  EIYTSGNAVTSANALNSPPSERTRSTYLELCDACTKRKRLEVDS 730
            +I T       A+A+++ P+  T +  +E C  C+KR+RL+ DS
Sbjct: 347  DICTP-----IADAVSTSPTGCTTNKVVETCGVCSKRQRLDHDS 385


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857313|gb|EEE94860.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2283

 Score =  146 bits (369), Expect = 1e-32
 Identities = 133/509 (26%), Positives = 210/509 (41%), Gaps = 1/509 (0%)
 Frame = -2

Query: 1524 QTDRRPAHLLLGKKRLDARSYRESLRQEQPTKNQEADLNKKKLEEHDDTSQGDTDHTEAG 1345
            QT   P      ++ ++ +S    LR+ +  KNQ +            +S G     +  
Sbjct: 66   QTPTAPPATRKSERLVEKQSLSSPLRRSERGKNQSSS-----------SSSGSKKSGKKS 114

Query: 1344 TSKEVKDGADCVRNMEEVEEKDAGEGSKVAVEGPSSGLRKLDLGMSNVLGEVEPSLVGRK 1165
            +S  +K      ++++++E KD G   K  ++      +++D      L + +      +
Sbjct: 115  SSSVMKKKQKKEKSVKQLETKDVGNDKKHVIKAVLVETKRMDARAYKALFKRQ------Q 168

Query: 1164 RRRHSDELCESNNEQGSPVSKCEDNSLESSKEVCAEAETAQLDCSARENCPNVSITSEGR 985
            ++ + +  CE    + +  + C D + E                       NV+  SE  
Sbjct: 169  KKANLEGRCEEMKNKNADGNDCRDGASE-----------------------NVNGGSECS 205

Query: 984  SRSGDQCLKRASDVGNSKRKRKRKPEGSNSDSDASVPAANEEIYTSGNAVTSANALNSPP 805
             R  ++ + R        R  ++  EG+   S AS P            V   N    PP
Sbjct: 206  QRKVEELIDRCV-----LRDSEKNLEGN---SIASEPVKE---------VLENNGGPKPP 248

Query: 804  SERTRSTYLELCDACTKRKRLEVDSQKXXXXXXXXXXXXXXXSDPSPEEVHQHAAFFSNP 625
             +  + T+LE        +  E DS++                     +V Q        
Sbjct: 249  LKSQKLTFLE-----KDHQFKEGDSREDLNSDDSVLLSAQRTLSEPENDVAQM------- 296

Query: 624  ENEEMPITCVLNNENKTDADQIEKKSGDDVHLLKNELLPEVERNYVPDQTHLDNTAEIST 445
            E E++P   V    N+T     E +SG        + +P   +  + D  + D T  +S 
Sbjct: 297  EQEQLPAELVDLTVNRTPRVDTEVESG-------YKEMPFKRKRSIED-LNSDATTMVSN 348

Query: 444  PLATDGS-EHGSRDGLGLNEESCKMLRLEESSVNTQTECDHNACVVXXXXXXXXXXXXXX 268
             +A     E+G  D +     S K  R           CD   C                
Sbjct: 349  KVADAAPYENGRTDSVAKCATSSKRQRC----------CDGQGC---------------- 382

Query: 267  XKRNYHLDCLDPPFKVVPLGVWHCSQCIKKKIQFGVHSVSKGVESLWDIREEEVSDCEGI 88
             KR+YHL CLDPP   VPLGVWHC  C++KKI+FG+HSVSKG+ES+WD  E EV+D  G+
Sbjct: 383  -KRSYHLSCLDPPLGDVPLGVWHCLACVRKKIEFGMHSVSKGIESIWDASEVEVADDNGV 441

Query: 87   QKQKKYLVKYKGLAHVHNKWILEHQLLLE 1
            Q+QK++ VKYKGLAHVHN+W+ E+QL+LE
Sbjct: 442  QRQKQFYVKYKGLAHVHNRWLPENQLILE 470


>ref|XP_004139555.1| PREDICTED: uncharacterized protein LOC101222705 [Cucumis sativus]
          Length = 2887

 Score =  142 bits (358), Expect = 3e-31
 Identities = 66/145 (45%), Positives = 96/145 (66%), Gaps = 2/145 (1%)
 Frame = -2

Query: 429  GSEHGSRDGLGLNEES--CKMLRLEESSVNTQTECDHNACVVXXXXXXXXXXXXXXXKRN 256
            G + G   G  +++ +  C   +LE++S+    + D NAC++               +R+
Sbjct: 605  GEDRGKSMGNSISDPTGNCVWCKLEKASL----DIDPNACLICKVGGKLLCCEGKECRRS 660

Query: 255  YHLDCLDPPFKVVPLGVWHCSQCIKKKIQFGVHSVSKGVESLWDIREEEVSDCEGIQKQK 76
            +HL CLDPP + VPLGVWHC  CI++KI+FGV++VSKG ES+WD RE E+SD +G Q+QK
Sbjct: 661  FHLSCLDPPLEDVPLGVWHCPMCIRRKIKFGVYAVSKGFESIWDTRETEISDADGSQRQK 720

Query: 75   KYLVKYKGLAHVHNKWILEHQLLLE 1
            +Y VK+K LAH HN+W+ E +LLLE
Sbjct: 721  QYFVKFKDLAHAHNRWLPESKLLLE 745


>dbj|BAG70995.1| uncharacterized protein [Musa balbisiana]
           gi|199601726|dbj|BAG70985.1| uncharacterized protein
           [Musa balbisiana]
          Length = 405

 Score =  114 bits (284), Expect = 1e-22
 Identities = 69/196 (35%), Positives = 104/196 (53%)
 Frame = -2

Query: 588 NENKTDADQIEKKSGDDVHLLKNELLPEVERNYVPDQTHLDNTAEISTPLATDGSEHGSR 409
           ++++  A  +E+  G+ V   K++L    + N          T  + T +  + +     
Sbjct: 81  DKHENAASCLEEYKGNSVSEAKSQLAGAEKPNCSVASAC---TLSVKTSMEENKARSVDC 137

Query: 408 DGLGLNEESCKMLRLEESSVNTQTECDHNACVVXXXXXXXXXXXXXXXKRNYHLDCLDPP 229
           D + ++++      LE  SV  Q +     CVV                R+YHL CLDPP
Sbjct: 138 DFMDISKQLVGSNTLE--SVEIQKDGGPTTCVVCRRPETDLSCDGKGCNRSYHLSCLDPP 195

Query: 228 FKVVPLGVWHCSQCIKKKIQFGVHSVSKGVESLWDIREEEVSDCEGIQKQKKYLVKYKGL 49
            +    GVW C  CIK+KI+FGV+SVS+G++S+W+I+       EG+Q  K+YLVKYKGL
Sbjct: 196 LQDTLPGVWLCIFCIKRKIEFGVYSVSEGIDSIWNIK-------EGLQTGKRYLVKYKGL 248

Query: 48  AHVHNKWILEHQLLLE 1
           AHVHN+WI E Q+L E
Sbjct: 249 AHVHNQWISEIQMLQE 264


>gb|AFW86279.1| hypothetical protein ZEAMMB73_952056 [Zea mays]
          Length = 1990

 Score =  103 bits (256), Expect = 2e-19
 Identities = 56/137 (40%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
 Frame = -2

Query: 408 DGLGLNEESCKMLRLEESSVNTQTECDHNACVVXXXXXXXXXXXXXXXK---RNYHLDCL 238
           DG  +  +     R  E+    +T  D N CVV               K   R+YHL C+
Sbjct: 39  DGNSIGIQGACTSRNTEAIQCDETWYDDNICVVCRSREISDILKSCGGKGCKRHYHLSCM 98

Query: 237 DPPFKVVPLGVWHCSQCIKKKIQFGVHSVSKGVESLWDIREEEVSDCEGIQKQKKYLVKY 58
           DP   V  LG+W C  C+KK+IQFGV+SVS+G+ESLWD++       EG+   K+Y VKY
Sbjct: 99  DPSLDV-SLGIWLCIMCMKKRIQFGVYSVSEGIESLWDVK-------EGVVNSKQYFVKY 150

Query: 57  KGLAHVHNKWILEHQLL 7
           K LAHVHN+W+ E  ++
Sbjct: 151 KNLAHVHNQWVSESDIV 167


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