BLASTX nr result

ID: Coptis25_contig00013495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00013495
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]   168   4e-40
ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine...   159   2e-37
ref|XP_003623235.1| Receptor kinase-like protein [Medicago trunc...   155   4e-36
ref|XP_002309132.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35

>emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]
          Length = 1904

 Score =  168 bits (426), Expect = 4e-40
 Identities = 83/153 (54%), Positives = 111/153 (72%), Gaps = 5/153 (3%)
 Frame = -1

Query: 450 LPFALGLYLSIYIHIVLLYCSG-----SSAAFFGNETDKLALLAFKDGITRDPLRVMSSW 286
           +PF   ++ SI +   +++        SS   +GNETD+LALLA K  IT+DPL + +SW
Sbjct: 34  IPFRSFIFHSILVPYTIIFLHSPSPTTSSTILYGNETDRLALLAIKAQITQDPLGITTSW 93

Query: 285 NDSLHFCGWTGVTCSLFDQRVVVLSLVNQELVGSLSPSLGNLSFLTGINLRNNGFNGRIP 106
           NDS+HFC WTGVTC    QRV  L+L +  LVGSLSPS+GNL+FLTG+NL  N F+G+IP
Sbjct: 94  NDSVHFCNWTGVTCGHRHQRVNTLNLSSLHLVGSLSPSIGNLTFLTGLNLELNNFHGQIP 153

Query: 105 EEVGRLTRLQYLNLTHNSFQGAIPVNLTQCLDL 7
           +E+GRL+RL+ LNLT+NSF G IP NL++C +L
Sbjct: 154 QELGRLSRLRALNLTNNSFSGEIPANLSRCSNL 186



 Score =  121 bits (303), Expect = 7e-26
 Identities = 62/108 (57%), Positives = 75/108 (69%)
 Frame = -1

Query: 327  DGITRDPLRVMSSWNDSLHFCGWTGVTCSLFDQRVVVLSLVNQELVGSLSPSLGNLSFLT 148
            +GIT  PLR MSSWNDSLHFC W GV+CS   QRV VL+L +  LVGS+ P +GNLSFL 
Sbjct: 1062 NGITDAPLRAMSSWNDSLHFCQWQGVSCSGRHQRVTVLNLHSLGLVGSIPPLIGNLSFLR 1121

Query: 147  GINLRNNGFNGRIPEEVGRLTRLQYLNLTHNSFQGAIPVNLTQCLDLR 4
             INL NN F G +P  V    R+Q LNLT+N  +G IP NL+ C ++R
Sbjct: 1122 TINLSNNSFQGEVPPVV----RMQILNLTNNWLEGQIPANLSXCSNMR 1165


>ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Vitis vinifera]
          Length = 1040

 Score =  159 bits (402), Expect = 2e-37
 Identities = 76/119 (63%), Positives = 96/119 (80%)
 Frame = -1

Query: 363 NETDKLALLAFKDGITRDPLRVMSSWNDSLHFCGWTGVTCSLFDQRVVVLSLVNQELVGS 184
           NETD+LALLA K  IT+DPL + +SWNDS+HFC WTGVTC    QRV  L+L +  LVGS
Sbjct: 37  NETDRLALLAIKAQITQDPLGITTSWNDSVHFCNWTGVTCGHRHQRVNTLNLNSLHLVGS 96

Query: 183 LSPSLGNLSFLTGINLRNNGFNGRIPEEVGRLTRLQYLNLTHNSFQGAIPVNLTQCLDL 7
           LSPS+GNL+FLTG+NL  N F+G+IP+E+GRL+RL+ LNLT+NSF G IP NL++C +L
Sbjct: 97  LSPSIGNLTFLTGLNLELNNFHGQIPQELGRLSRLRALNLTNNSFSGEIPANLSRCSNL 155


>ref|XP_003623235.1| Receptor kinase-like protein [Medicago truncatula]
           gi|355498250|gb|AES79453.1| Receptor kinase-like protein
           [Medicago truncatula]
          Length = 1003

 Score =  155 bits (391), Expect = 4e-36
 Identities = 73/163 (44%), Positives = 110/163 (67%)
 Frame = -1

Query: 495 MDQVCFVVHTTLMDRLPFALGLYLSIYIHIVLLYCSGSSAAFFGNETDKLALLAFKDGIT 316
           M   C ++   +  +  ++  LY+S Y +      S +++   GNETD  ALL FK  IT
Sbjct: 2   MRNSCVIISKKIFFQFLYSFLLYISKYQY------SSTASTLQGNETDLHALLDFKSRIT 55

Query: 315 RDPLRVMSSWNDSLHFCGWTGVTCSLFDQRVVVLSLVNQELVGSLSPSLGNLSFLTGINL 136
           +DP + +S WNDS+H C W G+TC++ + RV+ L L +  L G+LSPS+GNL++LT +NL
Sbjct: 56  QDPFQALSLWNDSIHHCNWLGITCNISNGRVMHLILADMTLAGTLSPSIGNLTYLTKLNL 115

Query: 135 RNNGFNGRIPEEVGRLTRLQYLNLTHNSFQGAIPVNLTQCLDL 7
           RNN F+G  P++VG L  LQ+LN+++NSF G+IP NL+QC++L
Sbjct: 116 RNNSFHGEFPQQVGNLLYLQHLNISYNSFSGSIPSNLSQCIEL 158


>ref|XP_002309132.1| predicted protein [Populus trichocarpa] gi|222855108|gb|EEE92655.1|
           predicted protein [Populus trichocarpa]
          Length = 1034

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/150 (50%), Positives = 99/150 (66%), Gaps = 11/150 (7%)
 Frame = -1

Query: 423 SIYIHIVLLYC-----------SGSSAAFFGNETDKLALLAFKDGITRDPLRVMSSWNDS 277
           S+++ ++L  C           + ++    GNETD LALLA K  I  DPL +MSSWNDS
Sbjct: 4   SLFLKVILQSCFVVIFLHAPSFTQAATTLSGNETDHLALLAIKAQIKLDPLGLMSSWNDS 63

Query: 276 LHFCGWTGVTCSLFDQRVVVLSLVNQELVGSLSPSLGNLSFLTGINLRNNGFNGRIPEEV 97
           LHFC W G+ C    QRV+ L+L +  LVGSLSP +GN+SFL GI+L  N F+G IP+E+
Sbjct: 64  LHFCNWGGIICGNLHQRVITLNLSHYGLVGSLSPQIGNMSFLRGISLEQNYFHGEIPQEI 123

Query: 96  GRLTRLQYLNLTHNSFQGAIPVNLTQCLDL 7
           GRL RL+Y+N ++NSF G IP NL+ C  L
Sbjct: 124 GRLDRLKYINFSNNSFSGEIPANLSGCSSL 153


>ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|222850885|gb|EEE88432.1|
           predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  152 bits (385), Expect = 2e-35
 Identities = 77/132 (58%), Positives = 98/132 (74%)
 Frame = -1

Query: 402 LLYCSGSSAAFFGNETDKLALLAFKDGITRDPLRVMSSWNDSLHFCGWTGVTCSLFDQRV 223
           +++ S SS+   GNETD+L+LLAFKD I  DPL  +SSWNDS HFC W+GVTC    QRV
Sbjct: 18  VIHLSLSSSLPIGNETDRLSLLAFKDQIEADPLGTLSSWNDSSHFCEWSGVTCGRRHQRV 77

Query: 222 VVLSLVNQELVGSLSPSLGNLSFLTGINLRNNGFNGRIPEEVGRLTRLQYLNLTHNSFQG 43
           V L L + +LVGSLSP +GNLSFL  +NL NN F+  IP+E+GRL RLQ L L +N+F G
Sbjct: 78  VELDLNSCKLVGSLSPHIGNLSFLRILNLNNNSFSHTIPQEIGRLFRLQKLLLRNNTFTG 137

Query: 42  AIPVNLTQCLDL 7
            IPVN+++C +L
Sbjct: 138 EIPVNISRCSNL 149


Top